FFCP PHASE1:Hg19::chr1:28520384..28520393,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5724 | |EntrezGene=5724 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9582 | |HGNC=9582 | ||
|TSSclassifier=strong | |||
|UniProt=P25105 | |UniProt=P25105 | ||
|association_with_transcript=0bp_to_ENST00000305392_5end | |association_with_transcript=0bp_to_ENST00000305392_5end | ||
|cluster_id=chr1:28520384..28520393,- | |||
|coexpression_cluster_id=C128 | |coexpression_cluster_id=C128 | ||
|description=CAGE_peak_15_at_PTAFR_5end | |description=CAGE_peak_15_at_PTAFR_5end | ||
|id=chr1:28520384..28520393,- | |id=chr1:28520384..28520393,- | ||
|ontology_enrichment_celltype=CL:0000066!6.30e-20!254;CL:0002322!1.42e-11!5;CL:0002076!6.68e-11!43;CL:0000223!6.49e-09!59 | |ontology_enrichment_celltype=CL:0000066!6.30e-20!254;CL:0002322!1.42e-11!5;CL:0002076!6.68e-11!43;CL:0000223!6.49e-09!59 | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.06e-15;7!CL:0000586;3.06e-15;7!CL:0000239;1.41e-09;3!CL:1000615;1.41e-09;3!CL:0002306;1.41e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.47e-15,7;CL:0000586,2.47e-15,7;CL:0000239,1.81e-09,3;CL:1000615,1.81e-09,3;CL:0002306,1.81e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.69e-11;10!UBERON:0005564;5.69e-11;10 | |||
|ontology_enrichment_disease=DOID:305!8.47e-19!106;DOID:1749!5.49e-15!14;DOID:0050687!2.87e-12!143;DOID:299!5.81e-11!25 | |ontology_enrichment_disease=DOID:305!8.47e-19!106;DOID:1749!5.49e-15!14;DOID:0050687!2.87e-12!143;DOID:299!5.81e-11!25 | ||
|ontology_enrichment_disease_v019=DOID:3493;1.07e-13;2!DOID:1749;4.82e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.37e-13,2;DOID:305,1.68e-11,106;DOID:0050687,1.64e-08,143;DOID:1749,4.34e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.19e-10!169;UBERON:0000925!2.19e-10!169;UBERON:0006595!2.19e-10!169;UBERON:0000466!2.88e-10!126;UBERON:0000464!3.65e-10!104;UBERON:0003133!9.78e-09!48;UBERON:0005156!2.94e-08!59;UBERON:0000990!2.94e-08!59;UBERON:0000344!3.32e-08!12;UBERON:0001007!3.47e-08!155;UBERON:0001555!3.47e-08!155;UBERON:0007026!3.47e-08!155;UBERON:0002294!3.98e-08!7;UBERON:0001173!3.98e-08!7;UBERON:0004912!3.98e-08!7;UBERON:0000365!4.47e-08!5;UBERON:0003135!4.72e-08!11;UBERON:0000077!1.94e-07!130;UBERON:0000058!3.04e-07!26;UBERON:0003729!3.07e-07!5;UBERON:0005178!3.74e-07!34;UBERON:0002224!3.74e-07!34;UBERON:0005181!7.09e-07!35;UBERON:0005177!7.86e-07!107;UBERON:0004921!9.61e-07!129;UBERON:0004185!9.61e-07!129 | |ontology_enrichment_uberon=UBERON:0004119!2.19e-10!169;UBERON:0000925!2.19e-10!169;UBERON:0006595!2.19e-10!169;UBERON:0000466!2.88e-10!126;UBERON:0000464!3.65e-10!104;UBERON:0003133!9.78e-09!48;UBERON:0005156!2.94e-08!59;UBERON:0000990!2.94e-08!59;UBERON:0000344!3.32e-08!12;UBERON:0001007!3.47e-08!155;UBERON:0001555!3.47e-08!155;UBERON:0007026!3.47e-08!155;UBERON:0002294!3.98e-08!7;UBERON:0001173!3.98e-08!7;UBERON:0004912!3.98e-08!7;UBERON:0000365!4.47e-08!5;UBERON:0003135!4.72e-08!11;UBERON:0000077!1.94e-07!130;UBERON:0000058!3.04e-07!26;UBERON:0003729!3.07e-07!5;UBERON:0005178!3.74e-07!34;UBERON:0002224!3.74e-07!34;UBERON:0005181!7.09e-07!35;UBERON:0005177!7.86e-07!107;UBERON:0004921!9.61e-07!129;UBERON:0004185!9.61e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.82e-13;8!UBERON:0003135;4.62e-10;11!UBERON:0006853;1.41e-09;3!UBERON:0007685;1.41e-09;3!UBERON:0004134;1.41e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.51e-13,8;UBERON:0003135,4.03e-10,11;UBERON:0006853,1.81e-09,3;UBERON:0007685,1.81e-09,3;UBERON:0004134,1.81e-09,3 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0.365921118388786,0.265059536642971,0.232387885739037,0.414644220061482,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.301586917234893,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,1.01950509218015,0,0.895499018888713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0.86101074534246,0,0.443430153536676,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.179736702294654,0.358042349351218,0,0,0,0,0,0,0,0.260427761085233,0,0,1.365521379426,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.586993856796269,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0.284609546029793,0,1.21491816834592,0.391969589657511,0.261177619741208,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0.782205530939212,0,0.213452994739353,0,0.144090417154106,0,0,0,0,1.17847017308398,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0.321506296930038,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0.414239055347196,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845248493434508,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.366857197043358,0.231051332300676,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0.992422356778588,0,0.383287282918786,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.111231401892069,0,0,0.280272163313789,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0.223710863595585,0,1.09726132484042,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.0644578879735772,0,0.357107877211315,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.815910637935854,7.21486994217013,1.47031839255752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26940821205835,0.358611026963382,0.332660356546013,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p15@PTAFR | |short_description=p15@PTAFR | ||
}} | }} |
Latest revision as of 10:03, 17 September 2015
Short description: | p15@PTAFR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_PTAFR_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | 0bp_to_ENST00000305392_5end |
EntrezGene: | PTAFR |
HGNC: | 9582 |
UniProt: | P25105 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.47e-15 | 7 |
germ cell | 2.47e-15 | 7 |
brush border epithelial cell | 1.81e-09 | 3 |
kidney cortex tubule cell | 1.81e-09 | 3 |
epithelial cell of proximal tubule | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 1.51e-13 | 8 |
male reproductive organ | 4.03e-10 | 11 |
renal cortex tubule | 1.81e-09 | 3 |
region of nephron tubule | 1.81e-09 | 3 |
proximal tubule | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.37e-13 | 2 |
carcinoma | 1.68e-11 | 106 |
cell type cancer | 1.64e-08 | 143 |
squamous cell carcinoma | 4.34e-08 | 14 |