FFCP PHASE1:Hg19::chr19:35625915..35625972,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:35625915..35625972,- to FFCP PHASE1:Hg19::chr19:35625915..35625972,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=163175 | |EntrezGene=163175 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18712 | |HGNC=18712 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N135,A8MVC2 | |UniProt=Q8N135,A8MVC2 | ||
|association_with_transcript=131bp_to_ENST00000310123,ENST00000392225_5end | |||
|cluster_id=chr19:35625915..35625972,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_LGI4_5end | |||
|id=chr19:35625915..35625972,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.20e-15;82!UBERON:0002532;5.32e-07;206!UBERON:0010316;5.32e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.18e-67!115;UBERON:0001049!9.73e-40!57;UBERON:0005068!9.73e-40!57;UBERON:0006241!9.73e-40!57;UBERON:0007135!9.73e-40!57;UBERON:0001017!8.36e-36!82;UBERON:0005743!2.98e-35!86;UBERON:0002616!4.38e-34!59;UBERON:0003075!1.70e-32!86;UBERON:0007284!1.70e-32!86;UBERON:0000955!5.48e-32!69;UBERON:0006238!5.48e-32!69;UBERON:0000073!1.18e-31!94;UBERON:0001016!1.18e-31!94;UBERON:0003080!3.50e-31!42;UBERON:0002346!1.27e-30!90;UBERON:0002780!1.64e-30!41;UBERON:0001890!1.64e-30!41;UBERON:0006240!1.64e-30!41;UBERON:0002020!7.87e-26!34;UBERON:0003528!7.87e-26!34;UBERON:0001893!1.11e-25!34;UBERON:0002791!6.46e-25!33;UBERON:0001869!4.88e-24!32;UBERON:0003056!4.71e-23!61;UBERON:0002619!1.89e-20!22;UBERON:0000153!6.02e-20!129;UBERON:0007811!6.02e-20!129;UBERON:0000033!3.75e-19!123;UBERON:0004121!6.61e-19!169;UBERON:0001950!1.22e-18!20;UBERON:0000956!2.60e-18!25;UBERON:0000203!2.60e-18!25;UBERON:0000924!3.20e-18!173;UBERON:0006601!3.20e-18!173;UBERON:0000062!1.22e-12!511;UBERON:0000475!3.94e-12!365;UBERON:0000468!4.72e-10!659;UBERON:0000481!1.34e-09!347;UBERON:0003076!1.37e-09!15;UBERON:0003057!1.37e-09!15;UBERON:0000064!1.69e-09!219;UBERON:0002420!3.96e-09!9;UBERON:0007245!3.96e-09!9;UBERON:0010009!3.96e-09!9;UBERON:0010011!3.96e-09!9;UBERON:0000454!3.96e-09!9;UBERON:0002308!5.03e-09!9;UBERON:0000125!5.03e-09!9;UBERON:0000467!2.12e-08!625;UBERON:0000922!2.37e-08!612;UBERON:0000480!2.71e-08!626;UBERON:0001871!2.87e-08!7;UBERON:0002298!3.93e-08!8;UBERON:0004732!6.44e-08!13;UBERON:0004111!8.24e-08!241;UBERON:0000477!2.03e-07!286;UBERON:0000483!2.70e-07!309;UBERON:0009663!2.77e-07!7;UBERON:0000119!3.52e-07!312;UBERON:0000025!4.37e-07!194;UBERON:0004733!4.96e-07!12;UBERON:0002028!4.96e-07!12;UBERON:0007277!4.96e-07!12;UBERON:0002050!5.53e-07!605;UBERON:0005423!5.53e-07!605;UBERON:0000200!8.09e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.04e-30;34!UBERON:0002020;1.04e-30;34!UBERON:0001893;1.27e-30;34!UBERON:0002791;2.96e-30;32!UBERON:0001869;3.00e-30;32!UBERON:0002780;4.12e-29;41!UBERON:0001890;4.12e-29;41!UBERON:0002619;4.25e-28;22!UBERON:0000073;1.40e-27;53!UBERON:0002616;1.40e-27;53!UBERON:0000956;1.22e-25;25!UBERON:0000203;1.22e-25;25!UBERON:0001950;1.50e-25;20!UBERON:0007023;2.31e-23;114!UBERON:0001017;5.91e-19;75!UBERON:0000955;1.87e-18;68!UBERON:0001016;4.69e-17;83!UBERON:0002420;3.54e-12;9!UBERON:0007245;3.54e-12;9!UBERON:0010009;3.54e-12;9!UBERON:0010011;3.54e-12;9!UBERON:0000454;3.54e-12;9!UBERON:0000125;4.92e-12;9!UBERON:0002308;4.92e-12;9!UBERON:0004732;7.89e-10;13!UBERON:0001871;1.17e-09;6!UBERON:0009663;1.36e-09;7!UBERON:0000200;6.03e-09;6!UBERON:0002298;7.51e-09;6!UBERON:0011216;1.19e-08;132!UBERON:0004733;1.30e-08;12!UBERON:0002028;1.30e-08;12!UBERON:0000349;7.81e-08;5!UBERON:0001872;2.57e-07;5!UBERON:0000922;4.21e-07;49!UBERON:0002021;6.35e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.18e-90,114;UBERON:0001049,2.71e-52,56;UBERON:0005068,2.71e-52,56;UBERON:0006241,2.71e-52,56;UBERON:0007135,2.71e-52,56;UBERON:0000073,2.57e-48,53;UBERON:0002616,2.57e-48,53;UBERON:0001017,2.78e-46,81;UBERON:0003075,2.56e-42,82;UBERON:0007284,2.56e-42,82;UBERON:0000955,2.03e-41,68;UBERON:0006238,2.03e-41,68;UBERON:0001016,2.10e-41,89;UBERON:0002780,4.97e-41,41;UBERON:0001890,4.97e-41,41;UBERON:0003080,4.97e-41,41;UBERON:0006240,4.97e-41,41;UBERON:0002346,2.33e-39,86;UBERON:0003528,3.11e-36,34;UBERON:0002020,3.11e-36,34;UBERON:0001893,5.09e-36,34;UBERON:0002791,9.77e-34,32;UBERON:0001869,1.05e-33,32;UBERON:0010371,1.27e-32,104;UBERON:0003056,1.79e-30,61;UBERON:0010314,2.20e-28,132;UBERON:0002619,4.40e-28,22;UBERON:0000956,1.25e-25,25;UBERON:0000203,1.25e-25,25;UBERON:0001950,1.56e-25,20;UBERON:0011216,2.40e-25,223;UBERON:0004121,5.44e-24,171;UBERON:0000924,5.44e-24,171;UBERON:0006601,5.44e-24,171;UBERON:0002420,3.54e-12,9;UBERON:0007245,3.54e-12,9;UBERON:0010009,3.54e-12,9;UBERON:0010011,3.54e-12,9;UBERON:0000454,3.54e-12,9;UBERON:0003076,3.88e-12,15;UBERON:0003057,3.88e-12,15;UBERON:0000125,4.96e-12,9;UBERON:0002308,4.96e-12,9;UBERON:0000025,1.59e-11,192;UBERON:0004111,2.61e-11,240;UBERON:0004732,7.93e-10,13;UBERON:0001871,1.19e-09,6;UBERON:0009663,1.35e-09,7;UBERON:0000200,6.04e-09,6;UBERON:0002298,7.57e-09,6;UBERON:0004733,1.31e-08,12;UBERON:0002028,1.31e-08,12;UBERON:0007277,1.31e-08,12;UBERON:0000922,1.97e-08,592;UBERON:0000483,3.37e-08,306;UBERON:0005423,5.04e-08,581;UBERON:0000119,6.45e-08,309;UBERON:0000349,7.87e-08,5;UBERON:0002050,1.42e-07,564;UBERON:0000923,1.77e-07,560;UBERON:0010316,1.77e-07,560;UBERON:0005291,1.77e-07,560;UBERON:0006598,1.77e-07,560;UBERON:0010317,1.77e-07,560;UBERON:0002532,1.77e-07,560;UBERON:0001872,2.59e-07,5;UBERON:0000479,3.33e-07,773;UBERON:0002021,6.39e-07,5 | |||
|phase1_expression=1.63510541343501,0.642301571672949,0.845726424575827,0,4.02264984984559,0.872338524100369,0,0.631719873426831,3.3954131665979,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,1.43117993565528,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0.257575567634187,0.290796477559129,0,0,0.464858073811369,1.23350366406548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0.56738522469114,0,0.502497330513487,0.521482918420201,0,49.0373597133029,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.534880391567015,0.144824403882799,0,0.670700859703636,0,0,0.50133791063589,0,0,6.8128881842369,0.0945348171640679,0,0,18.664518258424,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0.408308342509787,0,0.309977343527296,0,0,0,0,0,0,0,0,0,0.45071417671979,0,0,0.640672166455702,0,0,0.103052529238439,2.57640540045629,1.67505170698431,0.168776332241266,0,0.252433774244115,0.0920498986422993,0.161646056818812,0,0.201504196455281,0,0,0,0,0.975789649036763,0.795178609928912,0.580969714347592,6.73796857599908,0,0.72995471815166,0,3.21620469096443,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,2.36315962672562,0,8.73217913656106,0,0,0,0,0,0,1.03993478527958,0,14.0275790019843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0.288239906833923,0.12624243342638,0,0,0,0,0.102827492703324,0,2.28661146104463,0.112131084345361,0,0,0,10.7296933755565,0,0,0,0,0,0,0.142977993658148,1.62786481617433,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,1.77866236955724,1.30139853857622,0,2.01019518401218,2.55175500661265,0,0,0,0.12269149171914,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0.979005787313703,0.343143423810856,0,0,0,0,0,0.30239029332968,0,0,0,0.384417447767103,0.511707249066704,0,0,0,0,0,0,0,12.6902422071203,0,0,0.114814448164607,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,11.2314702696017,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.275673144969061,3.6522883255213,0.725083469571143,0.255679882248303,0.0890320356467374,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0.855877976067841,0,0,0,0,0,0,0,0,0,0,0,0.9554993798559,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0.354761064070598,1.26664581178598,3.29294892959902,0,0.349934720244983,0,0,0,7.15492885903522,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0.540911356951966,0,0,0,60.3613698600203,0,0.111443384277478,0,1.19372242368845,0,0,155.087033051542,141.654102325386,0,0,0,19.3270548603538,22.1027132424918,6.80218419206545,0,0,0.933118762985422,0,0.179021174675609,0,52.9715088270334,0,0,43.6199735742848,86.6454036831691,15.9691038400955,0,0.0874599999961957,24.649985564783,0,0.508507300585533,0,0,0,2.08349993919951,104.517483526033,77.4229135975119,105.281398058787,84.5931338473868,58.5184285528024,55.2851200828011,0,0,115.348437497192,0,0.23056390438806,0,0,1.91400695839152,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,18.9099766904916,52.5437933149835,95.9317327545792,0,0,0,80.8813595768125,20.8670188297685,61.8458136714895,0,0,0,36.3017650621439,25.4080503702194,20.8129477908733,26.411990284708,0.150323419414493,0,0,0,0,0,0,0,0,0,0,46.652020420622,0,0,0,0,45.9727938155108,0,47.4559555639118,0,0.19871461170299,62.5510664044082,0,0,23.4798294213288,0,0.144090417154106,0,0,0,0,0,0,0,0,0,64.2449708919475,68.5895948248885,0,0,0,51.9465266366393,80.8936296761243,20.8183177127276,2.79550600698588,7.2968428183217,16.5146878506986,12.2945754650709,0,0,0.0787831823072236,0,0.337017719270924,0,0,119.284453471395,114.1384543215,0,0.275078873194468,0,0,0,76.483691832453,0,4.72834243795189,4.45863999147484,0,0,0,27.8731177285613,10.5934715258469,0,0,0,0.326587360109409,0,0.082092520749339,0,0,0.732761168390412,9.27548222385549,159.27660223743,68.3642551009707,0,0,18.2606475490758,46.2180656993018,10.7702154390271,1.48849806543585,0,0,0,9.79232046065053,26.3224388723835,11.3347863402481,24.5904473032353,0,116.960999755642,148.383938120787,171.636765998611,159.40775640184,90.7399641571452,117.983165588629,2.90532133366085,0,22.5957185137055,0,0,0,0,0,0,0.554805861502613,0,1.0062716070103,1.77962244319307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37358282073117,1.34699795506368,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0.192914038270915,0,1.02496607435179,0,0,169.090067413567,0.194860308839388,0,1.4720885483026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0.636008701306837,0,0,0,0,56.7144057601738,85.017945795351,139.041091238779,52.5097892456333,13.6118715959728,46.335359151026,135.801017976387,251.274179656112,0.0981477185010256,0,0,0,0,0,3.97832444232549,20.9836816094428,0,3.12605604493237,0,0,0,51.3285643099799,107.788777608711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| ||
|short_description=p1@LGI4 | |||
}} | }} |
Latest revision as of 10:00, 17 September 2015
Short description: | p1@LGI4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LGI4_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 131bp_to_ENST00000310123, ENST00000392225_5end |
EntrezGene: | LGI4 |
HGNC: | 18712 |
UniProt: | Q8N135A8MVC2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data