FFCP PHASE1:Hg19::chr8:21914611..21914622,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2039 | |EntrezGene=2039 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3382 | |HGNC=3382 | ||
|TSSclassifier=strong | |||
|UniProt=E5RIG5 | |UniProt=E5RIG5 | ||
|association_with_transcript=134bp_to_ENST00000517804_5end | |association_with_transcript=134bp_to_ENST00000517804_5end | ||
|cluster_id=chr8:21914611..21914622,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_17_at_EPB49_5end | |description=CAGE_peak_17_at_EPB49_5end | ||
|id=chr8:21914611..21914622,+ | |id=chr8:21914611..21914622,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000764;7.38e-11;2!CL:0000558;7.38e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,7.40e-11,2;CL:0000765,7.40e-11,2;CL:0000050,7.40e-11,2;CL:0000038,7.40e-11,2;CL:0000558,7.40e-11,2;CL:0000547,7.40e-11,2;CL:0000549,7.40e-11,2;CL:0000550,7.40e-11,2;CL:0000552,7.40e-11,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!1.97e-10!8;DOID:8692!3.73e-10!31;DOID:1240!2.07e-07!39 | |ontology_enrichment_disease=DOID:1036!1.97e-10!8;DOID:8692!3.73e-10!31;DOID:1240!2.07e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:8692;8.70e-19;31!DOID:1036;2.61e-14;8!DOID:1240;2.44e-11;39!DOID:2531;4.44e-08;51!DOID:0060083;4.44e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.90e-19,31;DOID:1240,1.08e-14,39;DOID:1036,1.74e-14,8;DOID:2531,1.19e-10,51;DOID:0060083,1.19e-10,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.86e-60!115;UBERON:0001049!8.95e-39!57;UBERON:0005068!8.95e-39!57;UBERON:0006241!8.95e-39!57;UBERON:0007135!8.95e-39!57;UBERON:0002780!6.14e-31!41;UBERON:0001890!6.14e-31!41;UBERON:0006240!6.14e-31!41;UBERON:0002616!1.45e-30!59;UBERON:0001017!1.87e-30!82;UBERON:0005743!3.96e-30!86;UBERON:0003080!4.97e-30!42;UBERON:0000955!3.67e-28!69;UBERON:0006238!3.67e-28!69;UBERON:0003075!6.12e-27!86;UBERON:0007284!6.12e-27!86;UBERON:0000073!3.06e-26!94;UBERON:0001016!3.06e-26!94;UBERON:0002346!2.89e-25!90;UBERON:0001893!7.06e-25!34;UBERON:0001869!2.32e-24!32;UBERON:0002791!3.08e-23!33;UBERON:0002020!1.62e-22!34;UBERON:0003528!1.62e-22!34;UBERON:0002619!4.57e-21!22;UBERON:0003056!6.79e-20!61;UBERON:0000956!4.01e-18!25;UBERON:0000203!4.01e-18!25;UBERON:0001950!7.88e-18!20;UBERON:0000033!1.33e-15!123;UBERON:0000153!2.06e-14!129;UBERON:0007811!2.06e-14!129;UBERON:0000200!2.57e-13!6;UBERON:0000178!2.43e-12!15;UBERON:0000179!2.43e-12!15;UBERON:0000463!2.43e-12!15;UBERON:0004121!2.53e-12!169;UBERON:0000924!8.60e-12!173;UBERON:0006601!8.60e-12!173;UBERON:0003076!9.54e-10!15;UBERON:0003057!9.54e-10!15;UBERON:0001871!2.94e-09!7;UBERON:0000025!7.04e-09!194;UBERON:0001894!1.68e-07!7;UBERON:0006222!1.68e-07!7;UBERON:0002771!2.80e-07!3;UBERON:0000349!4.59e-07!5;UBERON:0002240!8.68e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!2.86e-60!115;UBERON:0001049!8.95e-39!57;UBERON:0005068!8.95e-39!57;UBERON:0006241!8.95e-39!57;UBERON:0007135!8.95e-39!57;UBERON:0002780!6.14e-31!41;UBERON:0001890!6.14e-31!41;UBERON:0006240!6.14e-31!41;UBERON:0002616!1.45e-30!59;UBERON:0001017!1.87e-30!82;UBERON:0005743!3.96e-30!86;UBERON:0003080!4.97e-30!42;UBERON:0000955!3.67e-28!69;UBERON:0006238!3.67e-28!69;UBERON:0003075!6.12e-27!86;UBERON:0007284!6.12e-27!86;UBERON:0000073!3.06e-26!94;UBERON:0001016!3.06e-26!94;UBERON:0002346!2.89e-25!90;UBERON:0001893!7.06e-25!34;UBERON:0001869!2.32e-24!32;UBERON:0002791!3.08e-23!33;UBERON:0002020!1.62e-22!34;UBERON:0003528!1.62e-22!34;UBERON:0002619!4.57e-21!22;UBERON:0003056!6.79e-20!61;UBERON:0000956!4.01e-18!25;UBERON:0000203!4.01e-18!25;UBERON:0001950!7.88e-18!20;UBERON:0000033!1.33e-15!123;UBERON:0000153!2.06e-14!129;UBERON:0007811!2.06e-14!129;UBERON:0000200!2.57e-13!6;UBERON:0000178!2.43e-12!15;UBERON:0000179!2.43e-12!15;UBERON:0000463!2.43e-12!15;UBERON:0004121!2.53e-12!169;UBERON:0000924!8.60e-12!173;UBERON:0006601!8.60e-12!173;UBERON:0003076!9.54e-10!15;UBERON:0003057!9.54e-10!15;UBERON:0001871!2.94e-09!7;UBERON:0000025!7.04e-09!194;UBERON:0001894!1.68e-07!7;UBERON:0006222!1.68e-07!7;UBERON:0002771!2.80e-07!3;UBERON:0000349!4.59e-07!5;UBERON:0002240!8.68e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.21e-25;15!UBERON:0000179;5.21e-25;15!UBERON:0000463;5.21e-25;15!UBERON:0001950;1.63e-15;20!UBERON:0002619;4.94e-14;22!UBERON:0001870;6.59e-14;3!UBERON:0001869;9.54e-13;32!UBERON:0002390;2.15e-12;32!UBERON:0001893;2.78e-12;34!UBERON:0000956;3.08e-12;25!UBERON:0000203;3.08e-12;25!UBERON:0000200;4.99e-12;6!UBERON:0002791;9.04e-11;32!UBERON:0003528;4.98e-10;34!UBERON:0002020;4.98e-10;34!UBERON:0002702;7.66e-10;2!UBERON:0002780;3.06e-09;41!UBERON:0001890;3.06e-09;41!UBERON:0007023;6.92e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.75e-25,15;UBERON:0000179,4.75e-25,15;UBERON:0000463,4.75e-25,15;UBERON:0007023,1.84e-23,114;UBERON:0001950,1.07e-15,20;UBERON:0002619,3.38e-14,22;UBERON:0001869,3.70e-14,32;UBERON:0001870,4.20e-14,3;UBERON:0001893,3.15e-13,34;UBERON:0002780,7.62e-13,41;UBERON:0001890,7.62e-13,41;UBERON:0003080,7.62e-13,41;UBERON:0006240,7.62e-13,41;UBERON:0000956,2.21e-12,25;UBERON:0000203,2.21e-12,25;UBERON:0000200,5.63e-12,6;UBERON:0002791,1.09e-11,32;UBERON:0000073,3.09e-11,53;UBERON:0002616,3.09e-11,53;UBERON:0000955,4.80e-11,68;UBERON:0006238,4.80e-11,68;UBERON:0003528,6.43e-11,34;UBERON:0002020,6.43e-11,34;UBERON:0001049,1.66e-10,56;UBERON:0005068,1.66e-10,56;UBERON:0006241,1.66e-10,56;UBERON:0007135,1.66e-10,56;UBERON:0001017,3.51e-10,81;UBERON:0002702,5.58e-10,2;UBERON:0001016,7.43e-09,89;UBERON:0003056,6.10e-08,61 | |||
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|short_description=p17@EPB49 | |short_description=p17@EPB49 | ||
}} | }} |
Latest revision as of 09:48, 17 September 2015
Short description: | p17@EPB49 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_EPB49_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 134bp_to_ENST00000517804_5end |
EntrezGene: | EPB49 |
HGNC: | 3382 |
UniProt: | E5RIG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 7.40e-11 | 2 |
erythroblast | 7.40e-11 | 2 |
megakaryocyte-erythroid progenitor cell | 7.40e-11 | 2 |
erythroid progenitor cell | 7.40e-11 | 2 |
reticulocyte | 7.40e-11 | 2 |
proerythroblast | 7.40e-11 | 2 |
basophilic erythroblast | 7.40e-11 | 2 |
polychromatophilic erythroblast | 7.40e-11 | 2 |
orthochromatic erythroblast | 7.40e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 4.75e-25 | 15 |
haemolymphatic fluid | 4.75e-25 | 15 |
organism substance | 4.75e-25 | 15 |
adult organism | 1.84e-23 | 114 |
neocortex | 1.07e-15 | 20 |
regional part of cerebral cortex | 3.38e-14 | 22 |
cerebral hemisphere | 3.70e-14 | 32 |
frontal cortex | 4.20e-14 | 3 |
telencephalon | 3.15e-13 | 34 |
regional part of forebrain | 7.62e-13 | 41 |
forebrain | 7.62e-13 | 41 |
anterior neural tube | 7.62e-13 | 41 |
future forebrain | 7.62e-13 | 41 |
cerebral cortex | 2.21e-12 | 25 |
pallium | 2.21e-12 | 25 |
gyrus | 5.63e-12 | 6 |
regional part of telencephalon | 1.09e-11 | 32 |
regional part of nervous system | 3.09e-11 | 53 |
regional part of brain | 3.09e-11 | 53 |
brain | 4.80e-11 | 68 |
future brain | 4.80e-11 | 68 |
brain grey matter | 6.43e-11 | 34 |
gray matter | 6.43e-11 | 34 |
neural tube | 1.66e-10 | 56 |
neural rod | 1.66e-10 | 56 |
future spinal cord | 1.66e-10 | 56 |
neural keel | 1.66e-10 | 56 |
central nervous system | 3.51e-10 | 81 |
middle frontal gyrus | 5.58e-10 | 2 |
nervous system | 7.43e-09 | 89 |
pre-chordal neural plate | 6.10e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.90e-19 | 31 |
leukemia | 1.08e-14 | 39 |
chronic leukemia | 1.74e-14 | 8 |
hematologic cancer | 1.19e-10 | 51 |
immune system cancer | 1.19e-10 | 51 |