FFCP PHASE1:Hg19::chr5:179234348..179234393,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11282 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7048 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UQ53 | |||
|association_with_transcript=-396bp_to_ENST00000518168,NM_014275,uc003mks.2_5end | |||
|cluster_id=chr5:179234348..179234393,- | |||
|description=CAGE_peak_8_at_MGAT4B_5end | |||
|id=chr5:179234348..179234393,- | |||
|ontology_enrichment_celltype=CL:0000766!2.26e-24!76;CL:0000557!9.13e-22!71;CL:0002057!1.07e-21!42;CL:0002009!1.60e-21!65;CL:0002194!2.98e-21!63;CL:0000576!2.98e-21!63;CL:0000040!2.98e-21!63;CL:0000559!2.98e-21!63;CL:0000860!1.29e-19!45;CL:0000839!3.12e-19!70;CL:0000144!2.17e-16!625;CL:0002371!2.70e-15!591;CL:0000012!9.90e-15!682;CL:0000548!1.62e-14!679;CL:0000004!1.62e-14!679;CL:0000255!1.62e-14!679;CL:0000763!2.89e-14!112;CL:0000049!2.89e-14!112;CL:0000063!9.49e-14!578;CL:0000213!1.68e-11!57;CL:0000215!1.68e-11!57;CL:0000003!3.94e-10!722;CL:0000115!9.44e-10!35;CL:0002139!2.09e-09!24;CL:0000048!3.01e-08!430;CL:0002078!4.05e-08!44;CL:0000222!6.24e-08!119;CL:0000034!1.38e-07!444;CL:0000723!1.76e-07!436;CL:0002393!4.20e-07!9;CL:0002397!4.20e-07!9;CL:0000134!7.91e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.70e-17;33!CL:0002057;9.70e-17;33!CL:0000473;8.95e-16;39!CL:0000234;8.95e-16;39!CL:0000576;2.31e-15;48!CL:0000766;7.70e-14;69!CL:0002139;1.96e-10;24!CL:0000115;1.26e-08;36!CL:0000071;2.01e-07;18!CL:0002078;6.58e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.05e-30,72;CL:0000557,1.49e-27,67;CL:0000473,2.95e-27,48;CL:0000234,2.95e-27,48;CL:0002009,3.66e-27,61;CL:0002194,6.95e-27,59;CL:0000576,6.95e-27,59;CL:0000040,6.95e-27,59;CL:0000559,6.95e-27,59;CL:0000860,2.98e-25,42;CL:0002057,2.98e-25,42;CL:0000839,6.09e-25,66;CL:0000763,2.60e-17,108;CL:0000049,2.60e-17,108;CL:0000213,1.40e-12,58;CL:0000215,1.40e-12,58;CL:0000048,3.93e-12,427;CL:0000723,2.56e-11,433;CL:0000034,3.37e-11,441;CL:0000115,6.75e-11,36;CL:0002139,8.65e-11,24;CL:0000134,8.75e-11,354;CL:0002320,2.66e-10,361;CL:0000219,2.13e-09,386;CL:0002078,2.79e-09,45;CL:0002393,4.39e-08,9;CL:0002397,4.39e-08,9;CL:0000222,8.03e-08,121;CL:0000071,1.35e-07,18;CL:0002546,1.35e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;2.75e-18;42!CL:0002546;2.01e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!7.11e-21!86;UBERON:0003081!1.49e-20!216;UBERON:0002371!1.80e-19!80;UBERON:0004765!1.58e-17!101;UBERON:0001434!1.58e-17!101;UBERON:0002193!1.32e-15!112;UBERON:0002405!4.52e-15!115;UBERON:0002390!2.13e-14!102;UBERON:0003061!2.13e-14!102;UBERON:0000926!2.93e-13!448;UBERON:0004120!2.93e-13!448;UBERON:0006603!2.93e-13!448;UBERON:0002204!3.40e-13!167;UBERON:0000055!8.28e-07!69;UBERON:0002384!8.79e-07!375;UBERON:0000467!9.50e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;1.30e-07;22!UBERON:0006914;1.43e-07;25!UBERON:0004638;2.01e-07;18!UBERON:0001986;2.01e-07;18!UBERON:0004852;2.01e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,4.25e-25,82;UBERON:0002371,1.88e-23,76;UBERON:0003081,5.83e-22,203;UBERON:0002405,5.94e-21,93;UBERON:0004765,9.54e-21,90;UBERON:0002193,8.55e-20,108;UBERON:0001434,5.55e-18,100;UBERON:0002390,8.09e-18,98;UBERON:0003061,8.09e-18,98;UBERON:0000926,3.29e-16,315;UBERON:0004120,3.29e-16,315;UBERON:0006603,3.29e-16,315;UBERON:0002204,4.21e-13,167;UBERON:0002384,1.18e-10,371;UBERON:0000487,9.91e-08,22;UBERON:0006914,1.31e-07,25;UBERON:0004638,1.35e-07,18;UBERON:0001986,1.35e-07,18;UBERON:0004852,1.35e-07,18 | |||
|phase1_expression=2.18014055124668,3.21150785836475,3.94672331468719,3.00219895059391,2.68176656656373,1.74467704820074,2.53299878168311,1.26343974685366,2.08948502559871,1.22866968250754,1.39560233594486,0.873765488520689,0.791300934685361,0.37129905888014,0.662794751455832,0.672325146451775,3.01347264011988,1.46062018077475,0.975865597581014,0.492484232307152,0.204000691244253,0,1.14494394852423,0.684372125364421,0.125542639594803,0.534893840235659,0.492603536699674,0.236132343941038,4.32700704533794,1.53531759238885,1.70297735647684,1.83884244895785,0.90361775633475,1.10926203050036,0,0,0,4.9859586767869,4.41197784434312,4.12320654360118,3.58264758783879,3.56283032620878,2.57575567634187,6.39752250630085,4.91238726795452,4.12392904019288,7.43772918098191,8.63452564845834,7.74265927237759,1.7261543539329,4.09857130446561,2.36482229888585,3.44745680736619,3.87290810150296,5.41705946377367,6.40023954444856,7.64137220161968,4.71919317334678,2.44867113896722,2.88836124368484,1.91801137739712,2.96866170168044,2.59302754908121,3.83602275479425,5.22376629531451,6.80862269629368,3.73693349397345,2.51248665256743,2.60741459210101,2.17188844705117,3.02699751316684,2.57794345191295,3.16462387440884,5.91514801673437,7.01594189884644,4.82214884669265,2.13424399178341,2.25265339262259,1.6072558669708,7.98035682475496,9.34908382835724,8.21988691940853,0,0,0,0,0,0,0,0,0,0,0.382273228125229,1.32171328579026,2.80254281490768,0,0,0.393010762749165,0.205601498999509,0.167186495390678,0,0,0,0,0,0,0,0.25618263945135,0,0.493313713811028,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0.403213486449465,0,0.144824403882799,2.43806866313962,0,0.383587685530591,0.361439152384566,0.50133791063589,1.15877215168659,1.5905718941022,0.973269740605272,0.850813354476611,0.443458794925128,0.702678285545008,1.0478326039817,0.364295288292542,0,5.51730569212962,4.35324343248168,2.79211717089617,0.238490624305342,0,0,1.59009925893364,3.4409383804245,1.73570250803797,3.39184765154406,4.61449379830897,1.10047216776027,2.08994966536811,3.35941786920128,2.84613010149368,4.68608857870538,7.65375702507379,3.04108842287405,5.6134273236079,3.30896772311282,2.43042584364528,1.96459402224975,1.34717623575702,1.46394924628319,3.06633274931766,1.89853131913626,2.01521918323448,10.5424333948851,34.9002237733493,0.436094052142534,1.98788780678127,1.2663051166458,2.38336525463794,4.01571269048339,0.709336764396714,2.24271040056923,2.1349799145941,3.45334567784024,1.55605517699883,1.61652806483626,0.980771418680752,0.454072282934794,0,0.937285727335186,0.624320153660641,0.570471821544449,1.94283284717341,0.23486899728753,0.161872944368132,0,1.42907919878425,0,1.75653827998801,2.37600571456411,0.989067717114227,0,5.74894513452991,0.505008341862199,0.125118519871964,0,0.877955241761676,0.919463387397059,2.25357088359895,0.680593098960126,1.25572744982203,1.2813443329114,1.27159140695737,1.20036438433761,1.95799805553034,3.60696756063881,1.67505170698431,1.5189869901714,0.389748020644795,1.26216887122057,1.56484827691909,1.61646056818812,1.06502877754984,0.403008392910561,0.67824236924195,1.15956511897978,1.63647672354501,2.00763216772303,0.853815942907168,1.59035721985782,0.69716365721711,1.0366105501537,0.756962552626885,0.36497735907583,3.12899064659632,1.92972281457866,1.38134921352481,1.39310378409594,4.33127689001751,0.709840800239063,0.168584690078102,0,0.220587945464788,0.217879444092406,0.71181185733329,0.674156540800822,0.196221465125346,0,5.16708818237254,0,2.8810180793198,1.47008711385542,0,0.982827216677626,1.18157981336281,0,1.35287282397425,0,0.98775256867763,1.1240175325762,0.100528972411631,0.185176890317059,0.325808305310325,0,0,1.04337364477569,1.05667824812239,3.46479474626577,2.77791307545966,3.61482889245737,0.790204397959275,1.71697232418975,1.72351904261178,2.80805118167085,2.52672975890838,0.93733833986777,1.51183915378974,0.992425680696705,0.716468181622786,0.581267877027924,0.766765358330422,0,0.528290604079356,4.14656231081544,2.30591925467138,2.90357596880674,0.63497894292169,1.90994212779139,2.34434894420094,1.71072446022705,1.54241239054985,1.50171528921959,5.14487578735041,0.672786506072164,0.87192013766656,0.4400297149257,2.45616259939778,7.15312891703765,0,3.45719551560332,3.12022310734098,0.771622122786426,1.41849132023278,0.799266537048298,1.57275793023962,9.22456729165453,1.64648067356154,0,1.06617584622764,0,3.31583314765545,4.35766729300147,2.59929777073348,1.2162378064119,3.01354254859276,4.21667878966063,0.958499421966331,1.14861935834114,1.42636905040718,1.88215698667853,1.64381058040307,1.43248770591916,0.112085143993527,0,0.215627574859517,0.385029108839245,1.52456774533478,1.30139853857622,0,0.837581326671744,0,8.98808428736619,2.99161459204025,2.07207756718018,0.24538298343828,0.500170521059677,0.271265023699736,1.66376689224646,0.713715955188647,2.20783381047509,1.28855556491985,3.61135319673263,2.27407504055985,2.0694614258501,1.32845119707087,1.29058417979192,1.12948698808508,2.3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| |||
|short_description=p8@MGAT4B | |||
}} |
Latest revision as of 09:32, 17 September 2015
Short description: | p8@MGAT4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_MGAT4B_5end |
Coexpression cluster: | NA |
Association with transcript: | -396bp_to_ENST00000518168, NM_014275, uc003mks.2_5end |
EntrezGene: | MGAT4B |
HGNC: | 7048 |
UniProt: | Q9UQ53 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.05e-30 | 72 |
granulocyte monocyte progenitor cell | 1.49e-27 | 67 |
defensive cell | 2.95e-27 | 48 |
phagocyte | 2.95e-27 | 48 |
macrophage dendritic cell progenitor | 3.66e-27 | 61 |
monopoietic cell | 6.95e-27 | 59 |
monocyte | 6.95e-27 | 59 |
monoblast | 6.95e-27 | 59 |
promonocyte | 6.95e-27 | 59 |
classical monocyte | 2.98e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.98e-25 | 42 |
myeloid lineage restricted progenitor cell | 6.09e-25 | 66 |
myeloid cell | 2.60e-17 | 108 |
common myeloid progenitor | 2.60e-17 | 108 |
lining cell | 1.40e-12 | 58 |
barrier cell | 1.40e-12 | 58 |
multi fate stem cell | 3.93e-12 | 427 |
somatic stem cell | 2.56e-11 | 433 |
stem cell | 3.37e-11 | 441 |
endothelial cell | 6.75e-11 | 36 |
endothelial cell of vascular tree | 8.65e-11 | 24 |
mesenchymal cell | 8.75e-11 | 354 |
connective tissue cell | 2.66e-10 | 361 |
motile cell | 2.13e-09 | 386 |
meso-epithelial cell | 2.79e-09 | 45 |
intermediate monocyte | 4.39e-08 | 9 |
CD14-positive, CD16-positive monocyte | 4.39e-08 | 9 |
mesodermal cell | 8.03e-08 | 121 |
blood vessel endothelial cell | 1.35e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.35e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
bone element | 4.25e-25 | 82 |
bone marrow | 1.88e-23 | 76 |
lateral plate mesoderm | 5.83e-22 | 203 |
immune system | 5.94e-21 | 93 |
skeletal element | 9.54e-21 | 90 |
hemolymphoid system | 8.55e-20 | 108 |
skeletal system | 5.55e-18 | 100 |
hematopoietic system | 8.09e-18 | 98 |
blood island | 8.09e-18 | 98 |
mesoderm | 3.29e-16 | 315 |
mesoderm-derived structure | 3.29e-16 | 315 |
presumptive mesoderm | 3.29e-16 | 315 |
musculoskeletal system | 4.21e-13 | 167 |
connective tissue | 1.18e-10 | 371 |
simple squamous epithelium | 9.91e-08 | 22 |
squamous epithelium | 1.31e-07 | 25 |
blood vessel endothelium | 1.35e-07 | 18 |
endothelium | 1.35e-07 | 18 |
cardiovascular system endothelium | 1.35e-07 | 18 |