FFCP PHASE1:Hg19::chr19:35521699..35521714,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:35521699..35521714,+
|short_description=p4@SCN1B
|description=CAGE_peak_4_at_SCN1B_5end
|association_with_transcript=107bp_to_ENST00000262631,ENST00000415...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6324 | |EntrezGene=6324 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10586 | |HGNC=10586 | ||
|TSSclassifier=strong | |||
|UniProt=Q07699 | |UniProt=Q07699 | ||
|association_with_transcript=107bp_to_ENST00000262631,ENST00000415950,NM_001037,NM_199037_5end | |||
|cluster_id=chr19:35521699..35521714,+ | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_4_at_SCN1B_5end | |||
|id=chr19:35521699..35521714,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.38e-10;82!UBERON:0006215;3.54e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.74e-35!115;UBERON:0005743!8.57e-23!86;UBERON:0001049!1.64e-21!57;UBERON:0005068!1.64e-21!57;UBERON:0006241!1.64e-21!57;UBERON:0007135!1.64e-21!57;UBERON:0000073!2.58e-21!94;UBERON:0001016!2.58e-21!94;UBERON:0001017!1.01e-20!82;UBERON:0002616!1.56e-19!59;UBERON:0000955!9.74e-18!69;UBERON:0006238!9.74e-18!69;UBERON:0003075!3.16e-17!86;UBERON:0007284!3.16e-17!86;UBERON:0002346!1.25e-15!90;UBERON:0000483!6.15e-15!309;UBERON:0000119!8.15e-15!312;UBERON:0002780!1.73e-13!41;UBERON:0001890!1.73e-13!41;UBERON:0006240!1.73e-13!41;UBERON:0003080!6.45e-13!42;UBERON:0000025!6.05e-12!194;UBERON:0001893!1.76e-11!34;UBERON:0002020!1.79e-11!34;UBERON:0003528!1.79e-11!34;UBERON:0002791!9.81e-11!33;UBERON:0001950!1.38e-10!20;UBERON:0003076!1.43e-10!15;UBERON:0003057!1.43e-10!15;UBERON:0002619!1.44e-10!22;UBERON:0004121!1.54e-10!169;UBERON:0004111!2.24e-10!241;UBERON:0001869!2.46e-10!32;UBERON:0000153!8.24e-10!129;UBERON:0007811!8.24e-10!129;UBERON:0000924!8.30e-10!173;UBERON:0006601!8.30e-10!173;UBERON:0000477!9.00e-10!286;UBERON:0000033!2.55e-09!123;UBERON:0003056!4.09e-09!61;UBERON:0004732!4.12e-09!13;UBERON:0000475!5.83e-09!365;UBERON:0000956!1.33e-08!25;UBERON:0000203!1.33e-08!25;UBERON:0004733!2.37e-08!12;UBERON:0002028!2.37e-08!12;UBERON:0007277!2.37e-08!12;UBERON:0000481!4.14e-08!347;UBERON:0000468!1.06e-07!659;UBERON:0007100!5.49e-07!27;UBERON:0000062!7.45e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;9.90e-18;22!UBERON:0001950;5.32e-17;20!UBERON:0000956;2.78e-15;25!UBERON:0000203;2.78e-15;25!UBERON:0001893;7.51e-13;34!UBERON:0001869;2.62e-12;32!UBERON:0002791;8.13e-12;32!UBERON:0007023;9.82e-12;114!UBERON:0004732;1.10e-11;13!UBERON:0003528;1.72e-11;34!UBERON:0002020;1.72e-11;34!UBERON:0000073;1.14e-10;53!UBERON:0002616;1.14e-10;53!UBERON:0002780;3.52e-10;41!UBERON:0001890;3.52e-10;41!UBERON:0004733;5.25e-10;12!UBERON:0002028;5.25e-10;12!UBERON:0001017;3.81e-09;75!UBERON:0002021;1.20e-08;5!UBERON:0007100;1.84e-08;25!UBERON:0001872;1.96e-08;5!UBERON:0000955;2.42e-08;68!UBERON:0001016;4.67e-08;83!UBERON:0002680;1.80e-07;9!UBERON:0001895;1.80e-07;9!UBERON:0002298;5.08e-07;6!UBERON:0005090;6.43e-07;2!UBERON:0001630;6.43e-07;2!UBERON:0000200;1.00e-06;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.73e-42,114;UBERON:0001049,1.08e-24,56;UBERON:0005068,1.08e-24,56;UBERON:0006241,1.08e-24,56;UBERON:0007135,1.08e-24,56;UBERON:0000073,2.82e-22,53;UBERON:0002616,2.82e-22,53;UBERON:0010314,9.04e-21,132;UBERON:0001017,2.07e-20,81;UBERON:0003075,5.47e-19,82;UBERON:0007284,5.47e-19,82;UBERON:0001016,5.86e-19,89;UBERON:0000955,8.07e-19,68;UBERON:0006238,8.07e-19,68;UBERON:0002346,9.68e-18,86;UBERON:0002619,1.38e-17,22;UBERON:0001950,8.58e-17,20;UBERON:0010371,1.23e-15,104;UBERON:0000956,3.69e-15,25;UBERON:0000203,3.69e-15,25;UBERON:0002780,2.25e-14,41;UBERON:0001890,2.25e-14,41;UBERON:0003080,2.25e-14,41;UBERON:0006240,2.25e-14,41;UBERON:0001893,6.96e-14,34;UBERON:0003528,7.03e-14,34;UBERON:0002020,7.03e-14,34;UBERON:0004121,2.79e-13,171;UBERON:0000924,2.79e-13,171;UBERON:0006601,2.79e-13,171;UBERON:0001869,3.90e-13,32;UBERON:0002791,6.50e-13,32;UBERON:0003076,1.79e-12,15;UBERON:0003057,1.79e-12,15;UBERON:0004732,1.37e-11,13;UBERON:0000025,2.70e-10,192;UBERON:0004733,6.34e-10,12;UBERON:0002028,6.34e-10,12;UBERON:0007277,6.34e-10,12;UBERON:0004111,1.38e-09,240;UBERON:0003056,2.08e-09,61;UBERON:0002021,1.18e-08,5;UBERON:0011216,1.42e-08,223;UBERON:0000483,2.09e-08,306;UBERON:0001872,2.56e-08,5;UBERON:0000119,3.27e-08,309;UBERON:0007100,8.88e-08,27;UBERON:0002680,1.67e-07,9;UBERON:0001895,1.67e-07,9;UBERON:0010092,1.67e-07,9;UBERON:0003103,5.41e-07,68;UBERON:0002298,6.33e-07,6;UBERON:0005090,6.45e-07,2;UBERON:0001630,6.45e-07,2 | |||
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| ||
|short_description=p4@SCN1B | |||
}} | }} |
Latest revision as of 09:31, 17 September 2015
Short description: | p4@SCN1B |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SCN1B_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | 107bp_to_ENST00000262631, ENST00000415950, NM_001037, NM_199037_5end |
EntrezGene: | SCN1B |
HGNC: | 10586 |
UniProt: | Q07699 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data