FFCP PHASE1:Hg19::chr19:35521594..35521614,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6324 | |EntrezGene=6324 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10586 | |HGNC=10586 | ||
|TSSclassifier=strong | |||
|UniProt=Q07699 | |UniProt=Q07699 | ||
|association_with_transcript=2bp_to_ENST00000262631,ENST00000415950,NM_001037,NM_199037_5end | |association_with_transcript=2bp_to_ENST00000262631,ENST00000415950,NM_001037,NM_199037_5end | ||
|cluster_id=chr19:35521594..35521614,+ | |||
|coexpression_cluster_id=C3776 | |coexpression_cluster_id=C3776 | ||
|description=CAGE_peak_6_at_SCN1B_5end | |description=CAGE_peak_6_at_SCN1B_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000669;9.78e-07;4 | |ontology_enrichment_celltype_v019=CL:0000669;9.78e-07;4 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.72e-10;3!UBERON:0006601;1.32e-09;82 | |ontology_enrichment_development_v019=UBERON:0006215;7.72e-10;3!UBERON:0006601;1.32e-09;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001950;1.59e-24;20!UBERON:0001893;2.22e-22;34!UBERON:0002619;4.50e-22;22!UBERON:0000073;1.15e-20;53!UBERON:0002616;1.15e-20;53!UBERON:0001869;5.04e-20;32!UBERON:0002791;2.93e-19;32!UBERON:0000956;4.19e-19;25!UBERON:0000203;4.19e-19;25!UBERON:0002780;4.80e-19;41!UBERON:0001890;4.80e-19;41!UBERON:0003528;1.15e-18;34!UBERON:0002020;1.15e-18;34!UBERON:0000955;3.57e-13;68!UBERON:0000200;4.60e-12;6!UBERON:0004733;2.28e-11;12!UBERON:0002028;2.28e-11;12!UBERON:0001017;3.31e-11;75!UBERON:0004732;2.10e-10;13!UBERON:0001872;3.75e-10;5!UBERON:0002021;4.84e-10;5!UBERON:0001016;2.53e-09;83!UBERON:0007023;2.78e-09;114!UBERON:0001870;3.59e-09;3!UBERON:0002680;2.55e-08;9!UBERON:0001895;2.55e-08;9!UBERON:0002298;4.00e-08;6!UBERON:0007100;2.38e-07;25!UBERON:0005090;3.73e-07;2!UBERON:0001630;3.73e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0001950;1.59e-24;20!UBERON:0001893;2.22e-22;34!UBERON:0002619;4.50e-22;22!UBERON:0000073;1.15e-20;53!UBERON:0002616;1.15e-20;53!UBERON:0001869;5.04e-20;32!UBERON:0002791;2.93e-19;32!UBERON:0000956;4.19e-19;25!UBERON:0000203;4.19e-19;25!UBERON:0002780;4.80e-19;41!UBERON:0001890;4.80e-19;41!UBERON:0003528;1.15e-18;34!UBERON:0002020;1.15e-18;34!UBERON:0000955;3.57e-13;68!UBERON:0000200;4.60e-12;6!UBERON:0004733;2.28e-11;12!UBERON:0002028;2.28e-11;12!UBERON:0001017;3.31e-11;75!UBERON:0004732;2.10e-10;13!UBERON:0001872;3.75e-10;5!UBERON:0002021;4.84e-10;5!UBERON:0001016;2.53e-09;83!UBERON:0007023;2.78e-09;114!UBERON:0001870;3.59e-09;3!UBERON:0002680;2.55e-08;9!UBERON:0001895;2.55e-08;9!UBERON:0002298;4.00e-08;6!UBERON:0007100;2.38e-07;25!UBERON:0005090;3.73e-07;2!UBERON:0001630;3.73e-07;2 | ||
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| ||
|short_description=p6@SCN1B | |short_description=p6@SCN1B | ||
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Latest revision as of 09:28, 17 September 2015
Short description: | p6@SCN1B |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SCN1B_5end |
Coexpression cluster: | C3776_skeletal_occipital_cerebellum_pons_left_postcentral_paracentral |
Association with transcript: | 2bp_to_ENST00000262631, ENST00000415950, NM_001037, NM_199037_5end |
EntrezGene: | SCN1B |
HGNC: | 10586 |
UniProt: | Q07699 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data