FFCP PHASE1:Hg19::chr19:35521408..35521423,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6324 | |EntrezGene=6324 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10586 | |HGNC=10586 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-110bp_to_uc002nxo.1,uc002nxp.2,uc010xsg.1_5end | |association_with_transcript=-110bp_to_uc002nxo.1,uc002nxp.2,uc010xsg.1_5end | ||
|cluster_id=chr19:35521408..35521423,+ | |||
|coexpression_cluster_id=C3776 | |||
|description=CAGE_peak_5_at_SCN1B_5end | |description=CAGE_peak_5_at_SCN1B_5end | ||
|id=chr19:35521408..35521423,+ | |id=chr19:35521408..35521423,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.86e-11;82!UBERON:0006215;1.60e-09;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.09e-33!115;UBERON:0001049!2.65e-24!57;UBERON:0005068!2.65e-24!57;UBERON:0006241!2.65e-24!57;UBERON:0007135!2.65e-24!57;UBERON:0005743!6.38e-24!86;UBERON:0001017!6.56e-24!82;UBERON:0000073!3.98e-23!94;UBERON:0001016!3.98e-23!94;UBERON:0002616!1.80e-21!59;UBERON:0000955!4.98e-21!69;UBERON:0006238!4.98e-21!69;UBERON:0003075!7.37e-20!86;UBERON:0007284!7.37e-20!86;UBERON:0002346!5.25e-18!90;UBERON:0002780!4.57e-17!41;UBERON:0001890!4.57e-17!41;UBERON:0006240!4.57e-17!41;UBERON:0003080!2.38e-16!42;UBERON:0001893!9.58e-15!34;UBERON:0002020!9.64e-15!34;UBERON:0003528!9.64e-15!34;UBERON:0000025!5.86e-14!194;UBERON:0004111!6.10e-14!241;UBERON:0002791!6.56e-14!33;UBERON:0001869!1.28e-13!32;UBERON:0000477!1.01e-12!286;UBERON:0000483!1.28e-12!309;UBERON:0000119!1.95e-12!312;UBERON:0000033!3.77e-12!123;UBERON:0002619!8.73e-12!22;UBERON:0003056!1.05e-11!61;UBERON:0000153!3.32e-11!129;UBERON:0007811!3.32e-11!129;UBERON:0004121!9.96e-11!169;UBERON:0001950!1.69e-10!20;UBERON:0000956!2.06e-10!25;UBERON:0000203!2.06e-10!25;UBERON:0000924!6.04e-10!173;UBERON:0006601!6.04e-10!173;UBERON:0000481!1.78e-09!347;UBERON:0003076!2.44e-09!15;UBERON:0003057!2.44e-09!15;UBERON:0004732!2.34e-08!13;UBERON:0004733!1.68e-07!12;UBERON:0002028!1.68e-07!12;UBERON:0007277!1.68e-07!12;UBERON:0000467!1.93e-07!625;UBERON:0000480!2.43e-07!626;UBERON:0000200!4.87e-07!6;UBERON:0000468!5.59e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;6.65e-30;20!UBERON:0002619;6.07e-27;22!UBERON:0000073;1.43e-23;53!UBERON:0002616;1.43e-23;53!UBERON:0000956;2.33e-23;25!UBERON:0000203;2.33e-23;25!UBERON:0003528;8.07e-23;34!UBERON:0002020;8.07e-23;34!UBERON:0001869;1.53e-22;32!UBERON:0001893;5.91e-22;34!UBERON:0002791;4.36e-20;32!UBERON:0002780;4.51e-20;41!UBERON:0001890;4.51e-20;41!UBERON:0000955;1.41e-18;68!UBERON:0000200;4.24e-18;6!UBERON:0001017;7.81e-18;75!UBERON:0004732;8.57e-17;13!UBERON:0004733;2.25e-14;12!UBERON:0002028;2.25e-14;12!UBERON:0001016;2.30e-13;83!UBERON:0002298;5.09e-12;6!UBERON:0002784;1.22e-11;4!UBERON:0007023;1.90e-11;114!UBERON:0002680;2.23e-11;9!UBERON:0001895;2.23e-11;9!UBERON:0002021;1.50e-10;5!UBERON:0001872;1.61e-10;5!UBERON:0001894;3.38e-10;7!UBERON:0001870;5.92e-10;3!UBERON:0000988;1.23e-09;3!UBERON:0002702;4.29e-07;2!UBERON:0002771;7.96e-07;2!UBERON:0001897;9.47e-07;2!UBERON:0010225;9.47e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,8.78e-49,56;UBERON:0005068,8.78e-49,56;UBERON:0006241,8.78e-49,56;UBERON:0007135,8.78e-49,56;UBERON:0000073,1.13e-45,53;UBERON:0002616,1.13e-45,53;UBERON:0000955,5.76e-41,68;UBERON:0006238,5.76e-41,68;UBERON:0001017,6.97e-40,81;UBERON:0007023,1.51e-39,114;UBERON:0001016,2.92e-37,89;UBERON:0003075,5.69e-35,82;UBERON:0007284,5.69e-35,82;UBERON:0002346,6.51e-33,86;UBERON:0002780,2.12e-32,41;UBERON:0001890,2.12e-32,41;UBERON:0003080,2.12e-32,41;UBERON:0006240,2.12e-32,41;UBERON:0001950,5.61e-30,20;UBERON:0002619,5.20e-27,22;UBERON:0003528,9.61e-27,34;UBERON:0002020,9.61e-27,34;UBERON:0001869,6.52e-26,32;UBERON:0010371,1.32e-25,104;UBERON:0010314,3.62e-25,132;UBERON:0001893,3.85e-24,34;UBERON:0000956,2.03e-23,25;UBERON:0000203,2.03e-23,25;UBERON:0002791,7.66e-23,32;UBERON:0003056,6.84e-22,61;UBERON:0000200,3.53e-18,6;UBERON:0003076,2.20e-17,15;UBERON:0003057,2.20e-17,15;UBERON:0004121,4.56e-17,171;UBERON:0000924,4.56e-17,171;UBERON:0006601,4.56e-17,171;UBERON:0004732,6.86e-17,13;UBERON:0011216,4.78e-15,223;UBERON:0004733,1.75e-14,12;UBERON:0002028,1.75e-14,12;UBERON:0007277,1.75e-14,12;UBERON:0000025,4.51e-14,192;UBERON:0002298,4.15e-12,6;UBERON:0004111,1.26e-11,240;UBERON:0002784,1.41e-11,4;UBERON:0002680,2.28e-11,9;UBERON:0001895,2.28e-11,9;UBERON:0010092,2.28e-11,9;UBERON:0000483,1.10e-10,306;UBERON:0002021,1.45e-10,5;UBERON:0001872,1.52e-10,5;UBERON:0000119,1.80e-10,309;UBERON:0001894,3.75e-10,7;UBERON:0006222,3.75e-10,7;UBERON:0001870,5.60e-10,3;UBERON:0000988,1.48e-09,3;UBERON:0002702,4.05e-07,2;UBERON:0002771,7.10e-07,2 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0.487932798790507,0,0.816002764977012,0,0,0.136874425072884,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647787332037959,1.03030227053675,0,0,0.242584061187816,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0.521482918420201,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,1.34140171940727,0.383587685530591,0.361439152384566,0,0.579386075843295,1.5905718941022,2.43317435151318,0,0,0.087834785693126,1.24430121722827,0,0,0,0,0,0,0,0,0.198762407366705,1.72046919021225,0,0.56530794192401,2.09749718104953,0.550236083880135,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0.357198913136319,0.44905874525234,0,1.53316637465883,0,0,0,0,0.436094052142534,0,0,0,0,0.709336764396714,0,0,0.24666754841716,0.622422070799533,0.404132016209064,0,0,0,0,0,0.570471821544449,0.448346041655403,0,0,0,0,0.245668634623536,0.206651562351531,0,0.247266929278557,0,0.718618141816238,0.168336113954066,0,0,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0.302256294682921,0.169560592310488,0,0,0,0.121973706129595,0.132529768321485,0.464775771478074,0.310983165046111,0.252320850875628,0,0,0.643240938192885,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.288732895522148,0.462985512576611,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0.414656231081544,1.00883967391873,0.12624243342638,0.190493682876507,0,0,0,0.205654985406647,0,0,0,0,0.07333828582095,0,0,0.845302752556,0,0,0,0,0,0.714889968290738,0,0,0,0,0,1.20575750823834,0,1.09970290300263,0,0,0,0.479249710983165,0,0,0,0.61642896765115,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0.500170521059677,0,0,0.178428988797162,0,0,0.601892199455438,0,0,0,0,0.260650843404249,0.391602314925481,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355123450626254,0,0,0.116210378459959,0.120859449591622,0,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0.431831832204279,0,0.541892875087706,0,0,0,0,0,0,0.512900250232778,0,0,0.103041011647722,0.0915694648183434,0.165018999841176,0,0,1.6068392984416,0.193341436584244,0.308097234229289,0,0,0.214840489736547,0.290033387828457,0,0,0,0,0,0.10115778085555,0,0,0,0,0.532306030317022,0,0.18532421910392,0,1.48863347743867,0,0.38126038784765,0.511795582622668,0,0,0,0,0.274537029736055,0.117812402345686,0.404364963146632,0,0.842516912477962,0,0,0,0.272999822815972,0.141405431953713,0,0,0.66343897524122,0,1.15755106853338,1.31178950409327,0,0.30982349809975,0.281695602532241,0.143411352204052,0,0,0,0.844430541190656,0.329294892959902,0.75894634753143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.844016498463076,0.890469640183247,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,10.6626602070474,5.19501349706367,0,0,0,0,0,0,0,0,0,0,0,0.723578631752448,1.52581736317083,2.54332297841817,13.2996428529096,3.07139556015562,0,0,0,2.73460934032803,0,0,0,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0.141353071433941,0,0,0.265372693510018,0,0,0,0,0.943615861729479,1.60515529459758,4.68528891450678,0,0,0,0,0,0,0.252746318513952,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.225980740780532,0.411125773940253,0,5.38141765624969,0,0,0,0.999048047910651,0,0,0,0.14405479798815,0,0,0.135904206073614,0.209205692624666,0,0,0.600420288709789,0.410716136675979,0,0,0,1.67569440763353,0.458320848023367,0.717873024576814,1.19807400299395,3.004582336956,2.00854311697685,0,0,0,0.393915911536118,0.164831716762333,0.404421263125109,0.688992370603241,0,0.795229689809303,0.953423842781029,0.160753148465019,0.275078873194468,0,0.2249738915515,0,2.30848315300494,0,0.236417121897595,0,0,0.179287339332845,0,1.42939065274673,0.662091970365432,0,0,0,0.653174720218818,0,0,0,0,0.146552233678082,0,3.61992277812342,1.19009341568421,0,0,0.427149650270779,0,0.414239055347196,0,0,0,0,0,0,0,0,0,3.54427271986794,2.92863035764712,3.254964198369,1.72022758707021,0.998361463831671,2.67014532647949,0,0.124980407962107,0,0,0.235265819698172,0,0,0.149254802886874,0,0,0.568209015825267,0,0,0,0.453692771289717,0.15543720058278,0.887130899937803,0,0,0.155262956876259,0,0,0,0.601030435988874,0,0,0.181848659202559,0.322231671127465,0,0,0,0.343395705182793,0.336749488765919,1.26184898228651,0,0.428883182749851,0,0,0,0,1.07453304648892,0,0,0,0,0.337884881306145,0,0.345430341731199,0,2.21213497842769,0.194860308839388,0.132864840313363,0.327130788511688,0.327609848846413,0.245772908753719,0.211312123358627,0,0,0,0,0.184105950251841,0,0,0,0,0.314531883711793,0.109209638192014,0,0,0,0.558644917973244,0,0.0788617450012534,0,0.352675943690684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| ||
|short_description=p5@SCN1B | |short_description=p5@SCN1B | ||
}} | }} |
Latest revision as of 09:26, 17 September 2015
Short description: | p5@SCN1B |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SCN1B_5end |
Coexpression cluster: | C3776_skeletal_occipital_cerebellum_pons_left_postcentral_paracentral |
Association with transcript: | -110bp_to_uc002nxo.1, uc002nxp.2, uc010xsg.1_5end |
EntrezGene: | SCN1B |
HGNC: | 10586 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data