FFCP PHASE1:Hg19::chr3:189507523..189507535,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:189507523..189507535,+
|short_description=p5@TP63
|description=CAGE_peak_5_at_TP63_5end
|association_with_transcript=39bp_to_ENST00000460036_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8626 | |EntrezGene=8626 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15979 | |HGNC=15979 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=39bp_to_ENST00000460036_5end | |||
|cluster_id=chr3:189507523..189507535,+ | |||
|coexpression_cluster_id=C2735 | |||
|description=CAGE_peak_5_at_TP63_5end | |||
|id=chr3:189507523..189507535,+ | |||
|ontology_enrichment_celltype=CL:0002076!6.29e-34!43;CL:0000223!1.47e-27!59;CL:0002368!1.09e-21!13;CL:0002251!6.22e-19!21;CL:0000066!4.34e-14!254;CL:0002202!6.63e-14!9;CL:0002632!6.63e-14!9;CL:0000622!1.08e-11!5;CL:0002159!1.17e-11!13;CL:0000154!1.22e-09!6;CL:0000244!3.00e-09!4;CL:0000731!3.00e-09!4;CL:0000068!1.46e-07!3;CL:0000069!1.46e-07!3;CL:0000307!1.46e-07!3;CL:0000377!1.46e-07!3;CL:0002623!1.66e-07!3;CL:0000076!2.11e-07!62;CL:0002328!2.92e-07!3;CL:0002621!7.46e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.01e-29;42!CL:0002368;1.56e-25;13!CL:0002251;4.06e-19;20!CL:0000622;1.85e-18;5!CL:0000154;2.54e-15;6!CL:0000244;2.52e-14;4!CL:0000731;2.52e-14;4!CL:0002159;3.09e-14;14!CL:0002202;1.30e-13;9!CL:0002632;1.30e-13;9!CL:0000307;1.60e-11;3!CL:0002623;1.60e-11;3!CL:0002328;5.56e-11;3!CL:0000150;4.40e-10;9!CL:0000317;1.17e-08;2!CL:1000448;1.17e-08;2!CL:0002308;1.17e-08;2!CL:0002140;1.17e-08;2!CL:0002327;4.04e-08;4!CL:0000575;2.88e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,7.01e-39,42;CL:0000223,6.90e-29,58;CL:0002368,1.18e-25,13;CL:0000066,1.81e-19,253;CL:0002251,5.16e-19,20;CL:0000622,2.26e-18,5;CL:0000154,2.99e-15,6;CL:0000244,2.57e-14,4;CL:0000731,2.57e-14,4;CL:0002159,3.33e-14,14;CL:0002202,1.22e-13,9;CL:0002632,1.22e-13,9;CL:0000076,1.03e-11,63;CL:0000068,1.60e-11,3;CL:0000069,1.60e-11,3;CL:0000307,1.60e-11,3;CL:0000377,1.60e-11,3;CL:0002623,1.98e-11,3;CL:0002328,5.03e-11,3;CL:0000150,4.88e-10,9;CL:0000317,1.15e-08,2;CL:1000448,1.15e-08,2;CL:0002308,1.15e-08,2;CL:0002140,1.15e-08,2;CL:0002327,3.95e-08,4;CL:0002321,1.52e-07,250;CL:0000575,2.89e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000223;2.35e-15;58!CL:0000377;1.60e-11;3!UBERON:0008814;3.74e-08;2!UBERON:0010056;3.74e-08;2!UBERON:0007297;2.88e-07;2 | |||
|ontology_enrichment_disease=DOID:1749!2.03e-19!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.50e-23;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,6.93e-23,14 | |||
|ontology_enrichment_uberon=UBERON:0001004!6.91e-19!72;UBERON:0004119!1.06e-17!169;UBERON:0000925!1.06e-17!169;UBERON:0006595!1.06e-17!169;UBERON:0000161!9.24e-15!35;UBERON:0000166!2.15e-14!21;UBERON:0000165!2.12e-13!28;UBERON:0000930!2.12e-13!28;UBERON:0007196!7.46e-13!14;UBERON:0001558!7.46e-13!14;UBERON:0000065!1.47e-12!53;UBERON:0000974!6.53e-12!10;UBERON:0001007!1.44e-11!155;UBERON:0001555!1.44e-11!155;UBERON:0007026!1.44e-11!155;UBERON:0003729!2.34e-11!5;UBERON:0000365!9.87e-11!5;UBERON:0003102!2.44e-10!95;UBERON:0006562!5.11e-10!11;UBERON:0000344!8.17e-10!12;UBERON:0003343!2.54e-09!4;UBERON:0004785!2.54e-09!4;UBERON:0000072!2.81e-09!46;UBERON:0005910!7.48e-09!6;UBERON:0004921!7.98e-09!129;UBERON:0004185!7.98e-09!129;UBERON:0000077!8.95e-09!130;UBERON:0001042!1.30e-08!10;UBERON:0009145!1.30e-08!10;UBERON:0001444!2.79e-08!48;UBERON:0001041!3.84e-08!98;UBERON:0000078!1.69e-07!18;UBERON:0003126!1.84e-07!7;UBERON:0001005!1.84e-07!7;UBERON:0004815!2.92e-07!3;UBERON:0002031!2.92e-07!3;UBERON:0004807!3.25e-07!28;UBERON:0001723!3.59e-07!3;UBERON:0001033!3.59e-07!3;UBERON:0010056!3.59e-07!3;UBERON:0005178!4.70e-07!34;UBERON:0002224!4.70e-07!34;UBERON:0001949!7.46e-07!3;UBERON:0005181!9.08e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;1.55e-15;28!UBERON:0003343;1.73e-14;4!UBERON:0004785;1.73e-14;4!UBERON:0000974;2.47e-14;6!UBERON:0000161;1.74e-13;19!UBERON:0000166;1.74e-13;19!UBERON:0003729;2.05e-12;13!UBERON:0000365;1.81e-11;5!UBERON:0004815;5.56e-11;3!UBERON:0002031;5.56e-11;3!UBERON:0001723;6.06e-11;3!UBERON:0001033;6.06e-11;3!UBERON:0000486;6.66e-10;12!UBERON:0005910;1.46e-09;6!UBERON:0002419;1.17e-08;2!UBERON:0007771;1.17e-08;2!UBERON:0003297;1.17e-08;2!UBERON:0001821;1.17e-08;2!UBERON:0003487;1.17e-08;2!UBERON:0001820;1.17e-08;2!UBERON:0001911;4.04e-08;4!UBERON:0007196;7.02e-08;15!UBERON:0001558;7.02e-08;15!UBERON:0000344;1.07e-07;20!UBERON:0001004;4.50e-07;65!UBERON:0007811;4.62e-07;52!UBERON:0000033;7.34e-07;50!UBERON:0002185;9.61e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,6.49e-17,22;UBERON:0001004,1.36e-15,74;UBERON:0000165,8.82e-15,29;UBERON:0000930,8.82e-15,29;UBERON:0003343,1.95e-14,4;UBERON:0004785,1.95e-14,4;UBERON:0003102,5.00e-14,99;UBERON:0000161,1.53e-13,36;UBERON:0003729,2.39e-12,13;UBERON:0004119,5.33e-12,160;UBERON:0000925,5.33e-12,160;UBERON:0006595,5.33e-12,160;UBERON:0000033,1.01e-11,56;UBERON:0000153,1.19e-11,62;UBERON:0007811,1.19e-11,62;UBERON:0000365,1.84e-11,5;UBERON:0004815,5.03e-11,3;UBERON:0002031,5.03e-11,3;UBERON:0001723,7.07e-11,3;UBERON:0001033,7.07e-11,3;UBERON:0010056,7.07e-11,3;UBERON:0001444,1.53e-10,49;UBERON:0005910,1.48e-09,6;UBERON:0002419,1.15e-08,2;UBERON:0007771,1.15e-08,2;UBERON:0003297,1.15e-08,2;UBERON:0001821,1.15e-08,2;UBERON:0003487,1.15e-08,2;UBERON:0001820,1.15e-08,2;UBERON:0005089,1.15e-08,2;UBERON:0005088,1.15e-08,2;UBERON:0000974,2.02e-08,10;UBERON:0001911,3.95e-08,4;UBERON:0005333,3.95e-08,4;UBERON:0008425,3.95e-08,4;UBERON:0005311,3.95e-08,4;UBERON:0000065,4.31e-08,54;UBERON:0007196,6.77e-08,15;UBERON:0001558,6.77e-08,15;UBERON:0000344,1.17e-07,20;UBERON:0002185,9.06e-07,5 | |||
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| ||
|short_description=p5@TP63 | |||
}} | }} |
Latest revision as of 09:13, 17 September 2015
Short description: | p5@TP63 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TP63_5end |
Coexpression cluster: | C2735_oral_Sebocyte_Keratinocyte_Small_cervical_Prostate_keratoacanthoma |
Association with transcript: | 39bp_to_ENST00000460036_5end |
EntrezGene: | TP63 |
HGNC: | 15979 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 7.01e-39 | 42 |
endodermal cell | 6.90e-29 | 58 |
respiratory epithelial cell | 1.18e-25 | 13 |
epithelial cell | 1.81e-19 | 253 |
epithelial cell of alimentary canal | 5.16e-19 | 20 |
acinar cell | 2.26e-18 | 5 |
protein secreting cell | 2.99e-15 | 6 |
transitional epithelial cell | 2.57e-14 | 4 |
urothelial cell | 2.57e-14 | 4 |
general ecto-epithelial cell | 3.33e-14 | 14 |
epithelial cell of tracheobronchial tree | 1.22e-13 | 9 |
epithelial cell of lower respiratory tract | 1.22e-13 | 9 |
squamous epithelial cell | 1.03e-11 | 63 |
duct epithelial cell | 1.60e-11 | 3 |
branched duct epithelial cell | 1.60e-11 | 3 |
tracheal epithelial cell | 1.60e-11 | 3 |
tracheoblast | 1.60e-11 | 3 |
acinar cell of salivary gland | 1.98e-11 | 3 |
bronchial epithelial cell | 5.03e-11 | 3 |
glandular epithelial cell | 4.88e-10 | 9 |
sebum secreting cell | 1.15e-08 | 2 |
epithelial cell of sweat gland | 1.15e-08 | 2 |
epithelial cell of skin gland | 1.15e-08 | 2 |
acinar cell of sebaceous gland | 1.15e-08 | 2 |
mammary gland epithelial cell | 3.95e-08 | 4 |
embryonic cell | 1.52e-07 | 250 |
corneal epithelial cell | 2.89e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 6.93e-23 | 14 |