FFCP PHASE1:Hg19::chr11:2170786..2170809,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:2170786..2170809,- to FFCP PHASE1:Hg19::chr11:2170786..2170809,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3481 | |EntrezGene=3481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5466 | |HGNC=5466 | ||
|TSSclassifier=strong | |||
|UniProt=P01344 | |UniProt=P01344 | ||
|association_with_transcript=23bp_to_ENST00000300632,NM_001007139,uc001lvh.2_5end | |||
|cluster_id=chr11:2170786..2170809,- | |||
|coexpression_cluster_id=C134 | |||
|description=CAGE_peak_66_at_IGF2_5end | |||
|id=chr11:2170786..2170809,- | |||
|ontology_enrichment_celltype=CL:0000188!1.38e-12!9;CL:0002575!1.80e-10!2;CL:0002537!1.34e-09!5;CL:0000594!8.50e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002537;5.55e-26;5!CL:0000349;3.81e-12;19!CL:0002575;2.15e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,4.68e-26,5;CL:0000349,3.60e-12,19;CL:0002575,2.48e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.78e-15;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!5.55e-12!14;UBERON:0000158!5.55e-12!14;UBERON:0000305!1.91e-11!7;UBERON:0000341!5.13e-11!2;UBERON:0000007!1.12e-10!2;UBERON:0004871!5.07e-10!8;UBERON:0000478!4.66e-09!24;UBERON:0001723!1.98e-07!3;UBERON:0001033!1.98e-07!3;UBERON:0010056!1.98e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;9.30e-23;10!UBERON:0000158;9.30e-23;10!UBERON:0000305;9.08e-19;7!UBERON:0007029;8.63e-16;1!UBERON:0002426;1.16e-15;1!UBERON:0003831;1.16e-15;1!UBERON:0003898;1.16e-15;1!UBERON:0004830;1.16e-15;1!UBERON:0003830;1.16e-15;1!UBERON:0005175;1.16e-15;1!UBERON:0001774;1.16e-15;1!UBERON:0001103;1.16e-15;1!UBERON:0000478;1.15e-14;24!UBERON:0000922;3.80e-09;49!UBERON:0001134;1.12e-08;16!UBERON:0002036;1.12e-08;16!UBERON:0000341;1.39e-08;2!UBERON:0005090;1.73e-08;2!UBERON:0001630;1.73e-08;2!UBERON:0003127;2.15e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,8.04e-19,7;UBERON:0004871,1.49e-16,8;UBERON:0005631,2.11e-16,14;UBERON:0000158,2.11e-16,14;UBERON:0007029,8.63e-16,1;UBERON:0002426,1.16e-15,1;UBERON:0003831,1.16e-15,1;UBERON:0003898,1.16e-15,1;UBERON:0004830,1.16e-15,1;UBERON:0003830,1.16e-15,1;UBERON:0005175,1.16e-15,1;UBERON:0001774,1.16e-15,1;UBERON:0001103,1.16e-15,1;UBERON:0010084,1.16e-15,1;UBERON:0000478,1.08e-14,24;UBERON:0000341,1.39e-08,2;UBERON:0005090,1.73e-08,2;UBERON:0001630,1.73e-08,2;UBERON:0003127,1.86e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,2.05886054286514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.386682873168488,0,0,0.137836572484531,0,0.145016693914229,0.0852266274161009,2.1367688555217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,1.90995587790152,2.37571744666111,6.75753544618311,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27600463892768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01288823649394,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599428828746391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.455324382702595,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,26.6757319207786,7.28566489588709,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852935927603924,9.9987061214771,0,0,0,0,0.202117188958219,0.217716747896961,17.7961316564346,0.134704106029175,0,2.99394320891412,0,0,0,0,2.34640942403454,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,2.05886054286514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.386682873168488,0,0,0.137836572484531,0,0.145016693914229,0.0852266274161009,2.1367688555217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,1.90995587790152,2.37571744666111,6.75753544618311,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27600463892768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01288823649394,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599428828746391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.455324382702595,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,26.6757319207786,7.28566489588709,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852935927603924,9.9987061214771,0,0,0,0,0.202117188958219,0.217716747896961,17.7961316564346,0.134704106029175,0,2.99394320891412,0,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p66@IGF2 | |||
}} | }} |
Latest revision as of 09:02, 17 September 2015
Short description: | p66@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_66_at_IGF2_5end |
Coexpression cluster: | C134_skeletal_diaphragm_tongue_throat_Skeletal_skin_penis |
Association with transcript: | 23bp_to_ENST00000300632, NM_001007139, uc001lvh.2_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P01344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 4.68e-26 | 5 |
extraembryonic cell | 3.60e-12 | 19 |
central nervous system pericyte | 2.48e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
amnion | 8.04e-19 | 7 |
somatic layer of lateral plate mesoderm | 1.49e-16 | 8 |
extraembryonic membrane | 2.11e-16 | 14 |
membranous layer | 2.11e-16 | 14 |
surface | 8.63e-16 | 1 |
chest muscle | 1.16e-15 | 1 |
respiratory system muscle | 1.16e-15 | 1 |
skeletal muscle of trunk | 1.16e-15 | 1 |
respiratory system skeletal muscle | 1.16e-15 | 1 |
thoracic segment muscle | 1.16e-15 | 1 |
chest organ | 1.16e-15 | 1 |
muscle of trunk | 1.16e-15 | 1 |
diaphragm | 1.16e-15 | 1 |
future diaphragm | 1.16e-15 | 1 |
extraembryonic structure | 1.08e-14 | 24 |
throat | 1.39e-08 | 2 |
muscle structure | 1.73e-08 | 2 |
muscle organ | 1.73e-08 | 2 |
open tracheal system trachea | 1.86e-08 | 2 |