FFCP PHASE1:Hg19::chr4:2263861..2263883,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10608 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13906 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BUD5 | |||
|association_with_transcript=-38bp_to_ENST00000537353_5end | |||
|cluster_id=chr4:2263861..2263883,- | |||
|description=CAGE_peak_2_at_MXD4_5end | |||
|id=chr4:2263861..2263883,- | |||
|ontology_enrichment_celltype=CL:0000222!3.97e-12!119;CL:0000115!1.09e-11!35;CL:0000183!4.62e-11!59;CL:0002371!6.33e-10!591;CL:0002078!1.70e-09!44;CL:0002139!2.46e-09!24;CL:0000680!3.75e-09!57;CL:0000056!3.75e-09!57;CL:0000355!3.75e-09!57;CL:0000187!8.12e-09!54;CL:0000192!8.25e-09!42;CL:0000514!8.25e-09!42;CL:0000791!1.20e-08!18;CL:0000789!1.20e-08!18;CL:0002420!1.20e-08!18;CL:0002419!1.20e-08!18;CL:0000790!1.20e-08!18;CL:0000071!1.90e-08!18;CL:0002546!1.90e-08!18;CL:0000048!6.71e-08!430;CL:0000723!1.25e-07!436;CL:0000034!2.40e-07!444;CL:0000359!4.55e-07!32;CL:0000738!9.23e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000115;2.19e-10;36!CL:0002139;1.09e-09;24!CL:0000791;8.55e-09;18!CL:0000789;8.55e-09;18!CL:0002419;8.55e-09;18!CL:0000071;1.15e-08;18!CL:0002078;2.47e-07;45!CL:0000192;5.42e-07;43!CL:0000359;5.64e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,9.58e-13,121;CL:0000115,3.66e-12,36;CL:0002078,6.38e-10,45;CL:0000680,2.34e-09,58;CL:0000056,2.34e-09,58;CL:0000355,2.34e-09,58;CL:0002139,2.46e-09,24;CL:0000187,5.08e-09,55;CL:0000192,5.12e-09,43;CL:0000514,5.12e-09,43;CL:0000791,1.20e-08,18;CL:0000789,1.20e-08,18;CL:0002420,1.20e-08,18;CL:0002419,1.20e-08,18;CL:0000790,1.20e-08,18;CL:0000048,1.73e-08,427;CL:0000071,1.90e-08,18;CL:0002546,1.90e-08,18;CL:0000723,3.31e-08,433;CL:0000738,6.28e-08,136;CL:0000034,6.61e-08,441;CL:0000359,4.54e-07,32;CL:0000393,9.89e-07,61;CL:0000211,9.89e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000790;8.55e-09;18!CL:0002546;1.15e-08;18!CL:0000514;5.42e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!5.93e-15!110;UBERON:0002049!6.07e-15!79;UBERON:0007798!6.07e-15!79;UBERON:0001009!1.45e-14!113;UBERON:0003081!9.67e-14!216;UBERON:0000055!8.32e-13!69;UBERON:0001981!4.39e-11!60;UBERON:0007500!4.39e-11!60;UBERON:0004537!4.39e-11!60;UBERON:0006965!4.39e-11!60;UBERON:0004872!6.02e-10!84;UBERON:0004290!7.37e-10!70;UBERON:0000914!1.02e-09!83;UBERON:0002329!1.02e-09!83;UBERON:0003077!1.02e-09!83;UBERON:0003059!1.02e-09!83;UBERON:0007282!1.02e-09!83;UBERON:0009618!1.02e-09!83;UBERON:0007285!1.02e-09!83;UBERON:0001134!2.12e-09!61;UBERON:0002036!2.12e-09!61;UBERON:0003082!2.12e-09!61;UBERON:0001637!3.03e-09!42;UBERON:0003509!3.03e-09!42;UBERON:0004572!3.03e-09!42;UBERON:0002385!4.22e-09!63;UBERON:0001015!4.22e-09!63;UBERON:0000383!4.22e-09!63;UBERON:0001986!1.90e-08!18;UBERON:0004638!1.90e-08!18;UBERON:0004852!1.90e-08!18;UBERON:0000486!2.01e-08!82;UBERON:0002204!1.19e-07!167;UBERON:0004573!3.09e-07!33;UBERON:0004571!3.09e-07!33;UBERON:0000490!4.44e-07!138;UBERON:0000487!9.36e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.15e-08;18!UBERON:0001986;1.15e-08;18!UBERON:0004852;1.15e-08;18!UBERON:0007500;1.15e-07;56!UBERON:0001981;1.15e-07;56!UBERON:0004537;1.15e-07;56!UBERON:0002049;1.19e-07;75!UBERON:0007798;1.19e-07;75!UBERON:0000055;2.40e-07;65!UBERON:0001637;3.96e-07;42!UBERON:0003509;3.96e-07;42!UBERON:0004572;3.96e-07;42!UBERON:0000487;6.32e-07;22!UBERON:0004573;8.97e-07;33!UBERON:0004571;8.97e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,2.02e-15,78;UBERON:0007798,2.02e-15,78;UBERON:0004535,2.45e-15,109;UBERON:0003081,4.41e-15,203;UBERON:0001009,6.18e-15,112;UBERON:0000055,2.84e-13,68;UBERON:0007503,1.34e-12,78;UBERON:0007500,1.52e-11,59;UBERON:0001981,1.52e-11,59;UBERON:0004537,1.52e-11,59;UBERON:0006965,1.52e-11,59;UBERON:0000926,4.64e-11,315;UBERON:0004120,4.64e-11,315;UBERON:0006603,4.64e-11,315;UBERON:0007524,2.47e-10,73;UBERON:0004872,2.75e-10,83;UBERON:0003077,3.28e-10,72;UBERON:0007285,3.28e-10,72;UBERON:0002329,4.61e-10,71;UBERON:0003059,4.61e-10,71;UBERON:0007282,4.61e-10,71;UBERON:0004290,4.61e-10,71;UBERON:0009618,4.61e-10,71;UBERON:0002204,1.01e-09,167;UBERON:0001134,1.32e-09,62;UBERON:0002036,1.32e-09,62;UBERON:0003082,1.32e-09,62;UBERON:0002385,2.65e-09,64;UBERON:0001015,2.65e-09,64;UBERON:0000383,2.65e-09,64;UBERON:0001637,3.02e-09,42;UBERON:0003509,3.02e-09,42;UBERON:0004572,3.02e-09,42;UBERON:0000486,1.30e-08,83;UBERON:0004638,1.90e-08,18;UBERON:0001986,1.90e-08,18;UBERON:0004852,1.90e-08,18;UBERON:0000490,7.38e-08,148;UBERON:0004573,3.08e-07,33;UBERON:0004571,3.08e-07,33;UBERON:0000487,9.35e-07,22 | |||
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| |||
|short_description=p2@MXD4 | |||
}} |
Latest revision as of 08:51, 17 September 2015
Short description: | p2@MXD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MXD4_5end |
Coexpression cluster: | NA |
Association with transcript: | -38bp_to_ENST00000537353_5end |
EntrezGene: | MXD4 |
HGNC: | 13906 |
UniProt: | Q9BUD5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 9.58e-13 | 121 |
endothelial cell | 3.66e-12 | 36 |
meso-epithelial cell | 6.38e-10 | 45 |
muscle precursor cell | 2.34e-09 | 58 |
myoblast | 2.34e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.34e-09 | 58 |
endothelial cell of vascular tree | 2.46e-09 | 24 |
muscle cell | 5.08e-09 | 55 |
smooth muscle cell | 5.12e-09 | 43 |
smooth muscle myoblast | 5.12e-09 | 43 |
mature alpha-beta T cell | 1.20e-08 | 18 |
alpha-beta T cell | 1.20e-08 | 18 |
immature T cell | 1.20e-08 | 18 |
mature T cell | 1.20e-08 | 18 |
immature alpha-beta T cell | 1.20e-08 | 18 |
multi fate stem cell | 1.73e-08 | 427 |
blood vessel endothelial cell | 1.90e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.90e-08 | 18 |
somatic stem cell | 3.31e-08 | 433 |
leukocyte | 6.28e-08 | 136 |
stem cell | 6.61e-08 | 441 |
vascular associated smooth muscle cell | 4.54e-07 | 32 |
electrically responsive cell | 9.89e-07 | 61 |
electrically active cell | 9.89e-07 | 61 |