FFCP PHASE1:Hg19::chr16:66638599..66638615,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:66638599..66638615,+ to FFCP PHASE1:Hg19::chr16:66638599..66638615,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=123920 | |EntrezGene=123920 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19174 | |HGNC=19174 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-18bp_to_NR_037619,uc002epy.2_5end | |||
|cluster_id=chr16:66638599..66638615,+ | |||
|description=CAGE_peak_2_at_CMTM3_5end | |||
|id=chr16:66638599..66638615,+ | |||
|ontology_enrichment_celltype=CL:0000144!8.76e-30!625;CL:0002371!3.17e-28!591;CL:0000548!3.44e-20!679;CL:0000004!3.44e-20!679;CL:0000255!3.44e-20!679;CL:0000012!6.60e-20!682;CL:0000003!2.27e-15!722;CL:0000055!1.13e-14!180;CL:0000220!8.07e-13!246;CL:0002321!1.39e-12!248;CL:0000222!4.31e-11!119;CL:0000048!1.42e-09!430;CL:0000723!7.92e-09!436;CL:0000034!1.29e-08!444;CL:0000183!5.13e-08!59;CL:1000449!7.33e-08!16;CL:1000497!9.17e-07!18;CL:0002518!9.17e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000449;2.70e-08;15!CL:1000497;4.42e-07;17!CL:0002518;4.42e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,9.57e-13,250;CL:0000222,3.60e-11,121;CL:0000048,2.43e-10,427;CL:0000723,1.45e-09,433;CL:0000034,2.41e-09,441;CL:1000449,2.43e-08,15;CL:0000219,3.51e-07,386;CL:1000497,4.02e-07,17;CL:0002518,4.02e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.53e-09!216;UBERON:0003914!2.19e-09!118;UBERON:0000926!3.37e-09!448;UBERON:0004120!3.37e-09!448;UBERON:0006603!3.37e-09!448;UBERON:0005256!1.01e-08!143;UBERON:0002049!1.59e-08!79;UBERON:0007798!1.59e-08!79;UBERON:0004211!7.33e-08!16;UBERON:0001285!7.33e-08!16;UBERON:0007684!7.33e-08!16;UBERON:0003220!7.33e-08!16;UBERON:0004208!7.33e-08!16;UBERON:0006555!2.03e-07!17;UBERON:0005103!2.03e-07!17;UBERON:0000083!2.03e-07!17;UBERON:0009201!2.03e-07!17;UBERON:0004819!2.03e-07!17;UBERON:0006553!2.03e-07!17;UBERON:0003074!2.03e-07!17;UBERON:0003060!2.03e-07!17;UBERON:0000486!8.28e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.70e-08;15!UBERON:0004819;2.70e-08;15!UBERON:0001285;2.70e-08;15!UBERON:0007684;2.70e-08;15!UBERON:0000353;2.50e-07;15!UBERON:0001851;7.89e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,7.51e-13,315;UBERON:0004120,7.51e-13,315;UBERON:0006603,7.51e-13,315;UBERON:0003914,1.77e-09,117;UBERON:0002049,9.10e-09,78;UBERON:0007798,9.10e-09,78;UBERON:0003081,1.04e-08,203;UBERON:0003104,2.12e-08,160;UBERON:0009142,2.12e-08,160;UBERON:0004211,2.43e-08,15;UBERON:0009773,2.43e-08,15;UBERON:0001231,2.43e-08,15;UBERON:0001285,2.43e-08,15;UBERON:0007684,2.43e-08,15;UBERON:0004208,2.43e-08,15;UBERON:0007503,5.18e-08,78;UBERON:0006555,7.70e-08,16;UBERON:0004819,7.70e-08,16;UBERON:0002204,7.86e-08,167;UBERON:0000353,2.31e-07,15;UBERON:0004535,7.10e-07,109;UBERON:0001851,7.70e-07,15 | |||
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| ||
|short_description=p2@CMTM3 | |||
}} | }} |
Latest revision as of 08:46, 17 September 2015
Short description: | p2@CMTM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CMTM3_5end |
Coexpression cluster: | NA |
Association with transcript: | -18bp_to_NR_037619, uc002epy.2_5end |
EntrezGene: | CMTM3 |
HGNC: | 19174 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 9.57e-13 | 250 |
mesodermal cell | 3.60e-11 | 121 |
multi fate stem cell | 2.43e-10 | 427 |
somatic stem cell | 1.45e-09 | 433 |
stem cell | 2.41e-09 | 441 |
epithelial cell of nephron | 2.43e-08 | 15 |
motile cell | 3.51e-07 | 386 |
kidney cell | 4.02e-07 | 17 |
kidney epithelial cell | 4.02e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 7.51e-13 | 315 |
mesoderm-derived structure | 7.51e-13 | 315 |
presumptive mesoderm | 7.51e-13 | 315 |
epithelial tube | 1.77e-09 | 117 |
vasculature | 9.10e-09 | 78 |
vascular system | 9.10e-09 | 78 |
lateral plate mesoderm | 1.04e-08 | 203 |
mesenchyme | 2.12e-08 | 160 |
entire embryonic mesenchyme | 2.12e-08 | 160 |
nephron epithelium | 2.43e-08 | 15 |
renal tubule | 2.43e-08 | 15 |
nephron tubule | 2.43e-08 | 15 |
nephron | 2.43e-08 | 15 |
uriniferous tubule | 2.43e-08 | 15 |
nephrogenic mesenchyme | 2.43e-08 | 15 |
epithelial vesicle | 5.18e-08 | 78 |
excretory tube | 7.70e-08 | 16 |
kidney epithelium | 7.70e-08 | 16 |
musculoskeletal system | 7.86e-08 | 167 |
parenchyma | 2.31e-07 | 15 |
cardiovascular system | 7.10e-07 | 109 |
cortex | 7.70e-07 | 15 |