FFCP PHASE1:Hg19::chr17:72667518..72667529,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=326624 | |EntrezGene=326624 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30268 | |HGNC=30268 | ||
|TSSclassifier=strong | |||
|UniProt=A8MUU7 | |UniProt=A8MUU7 | ||
|association_with_transcript=199bp_to_ENST00000392617_5end | |association_with_transcript=199bp_to_ENST00000392617_5end | ||
|cluster_id=chr17:72667518..72667529,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_8_at_RAB37_5end | |description=CAGE_peak_8_at_RAB37_5end | ||
|id=chr17:72667518..72667529,+ | |id=chr17:72667518..72667529,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.33e-118;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.16e-70!57;UBERON:0005068!7.16e-70!57;UBERON:0006241!7.16e-70!57;UBERON:0007135!7.16e-70!57;UBERON:0002616!2.05e-67!59;UBERON:0000955!2.26e-61!69;UBERON:0006238!2.26e-61!69;UBERON:0005743!6.30e-53!86;UBERON:0001017!2.87e-51!82;UBERON:0003075!2.51e-49!86;UBERON:0007284!2.51e-49!86;UBERON:0001950!1.77e-48!20;UBERON:0000073!1.20e-47!94;UBERON:0001016!1.20e-47!94;UBERON:0002346!5.51e-47!90;UBERON:0002619!4.37e-44!22;UBERON:0000200!8.84e-44!6;UBERON:0007023!6.74e-43!115;UBERON:0002780!5.95e-42!41;UBERON:0001890!5.95e-42!41;UBERON:0006240!5.95e-42!41;UBERON:0003080!6.58e-41!42;UBERON:0004733!2.23e-39!12;UBERON:0002028!2.23e-39!12;UBERON:0007277!2.23e-39!12;UBERON:0000033!3.83e-39!123;UBERON:0000956!9.19e-39!25;UBERON:0000203!9.19e-39!25;UBERON:0002020!1.17e-38!34;UBERON:0003528!1.17e-38!34;UBERON:0001893!1.48e-38!34;UBERON:0000153!3.64e-37!129;UBERON:0007811!3.64e-37!129;UBERON:0004732!2.84e-36!13;UBERON:0001869!2.08e-35!32;UBERON:0002791!3.45e-34!33;UBERON:0003076!2.66e-31!15;UBERON:0003057!2.66e-31!15;UBERON:0003056!3.90e-31!61;UBERON:0002680!4.76e-30!9;UBERON:0001895!4.76e-30!9;UBERON:0010092!4.76e-30!9;UBERON:0004121!4.28e-25!169;UBERON:0000924!1.98e-24!173;UBERON:0006601!1.98e-24!173;UBERON:0002298!3.14e-23!8;UBERON:0000988!6.07e-23!3;UBERON:0002771!1.49e-22!3;UBERON:0000025!5.74e-18!194;UBERON:0001870!9.16e-16!2;UBERON:0002148!1.33e-15!2;UBERON:0009662!1.33e-15!2;UBERON:0001871!5.98e-15!7;UBERON:0002021!5.71e-14!5;UBERON:0004111!1.15e-13!241;UBERON:0000064!1.82e-12!219;UBERON:0002037!2.39e-12!6;UBERON:0006215!2.39e-12!6;UBERON:0000477!4.67e-12!286;UBERON:0001896!5.15e-11!3;UBERON:0005290!5.15e-11!3;UBERON:0010096!5.15e-11!3;UBERON:0000483!7.76e-11!309;UBERON:0006331!1.03e-10!3;UBERON:0000119!1.08e-10!312;UBERON:0000475!1.60e-10!365;UBERON:0002702!4.89e-09!1;UBERON:0002022!6.65e-09!1;UBERON:0002581!8.36e-09!1;UBERON:0007190!1.13e-08!1;UBERON:0002902!1.42e-08!1;UBERON:0009899!1.42e-08!1;UBERON:0003112!1.65e-08!1;UBERON:0000032!1.65e-08!1;UBERON:0005253!1.65e-08!1;UBERON:0003128!1.65e-08!1;UBERON:0002241!1.65e-08!1;UBERON:0001703!1.65e-08!1;UBERON:0004761!1.65e-08!1;UBERON:0009617!1.65e-08!1;UBERON:0002336!2.22e-08!1;UBERON:0001018!2.22e-08!1;UBERON:0002473!2.22e-08!1;UBERON:0005340!2.22e-08!1;UBERON:0002316!2.22e-08!1;UBERON:0003544!2.22e-08!1;UBERON:0001020!2.22e-08!1;UBERON:0005970!2.22e-08!1;UBERON:0002437!2.22e-08!1;UBERON:0000481!3.73e-08!347;UBERON:0001872!6.08e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002680;2.36e-70;9!UBERON:0001895;2.36e-70;9!UBERON:0002037;8.14e-60;6!UBERON:0004733;4.93e-53;12!UBERON:0002028;4.93e-53;12!UBERON:0004732;4.92e-49;13!UBERON:0000988;1.96e-14;3!UBERON:0000073;2.71e-11;53!UBERON:0002616;2.71e-11;53!UBERON:0002021;3.35e-09;5!UBERON:0000955;5.48e-09;68!UBERON:0001016;1.80e-08;83!UBERON:0002298;7.01e-08;6!UBERON:0001017;1.12e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002680,2.58e-70,9;UBERON:0001895,2.58e-70,9;UBERON:0010092,2.58e-70,9;UBERON:0002037,8.15e-60,6;UBERON:0006215,8.15e-60,6;UBERON:0004733,5.27e-53,12;UBERON:0002028,5.27e-53,12;UBERON:0007277,5.27e-53,12;UBERON:0004732,5.24e-49,13;UBERON:0003076,1.31e-42,15;UBERON:0003057,1.31e-42,15;UBERON:0000073,6.22e-19,53;UBERON:0002616,6.22e-19,53;UBERON:0001049,5.63e-18,56;UBERON:0005068,5.63e-18,56;UBERON:0006241,5.63e-18,56;UBERON:0007135,5.63e-18,56;UBERON:0000955,9.02e-15,68;UBERON:0006238,9.02e-15,68;UBERON:0000988,2.09e-14,3;UBERON:0001017,1.45e-12,81;UBERON:0003075,1.45e-12,82;UBERON:0007284,1.45e-12,82;UBERON:0002346,5.13e-12,86;UBERON:0001016,2.13e-11,89;UBERON:0010371,4.61e-10,104;UBERON:0007023,2.58e-09,114;UBERON:0002021,3.22e-09,5;UBERON:0010314,4.60e-08,132;UBERON:0002298,7.25e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,6.10326945268333,10.1732919136727,10.0486190444206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.3755727921195,0,0.887432412294818,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41696576325585,0.319267718114302,0,0,0.276629009856872,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,0,0.697573912132975,0,0,0,0,0,0,0,0,0,0,0,0,1.08751572762931,0.394636641377094,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407948941145488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,6.10326945268333,10.1732919136727,10.0486190444206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.3755727921195,0,0.887432412294818,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41696576325585,0.319267718114302,0,0,0.276629009856872,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,0,0.697573912132975,0,0,0,0,0,0,0,0,0,0,0,0,1.08751572762931,0.394636641377094,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407948941145488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p8@RAB37 | |short_description=p8@RAB37 | ||
}} | }} |
Latest revision as of 08:43, 17 September 2015
Short description: | p8@RAB37 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RAB37_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 199bp_to_ENST00000392617_5end |
EntrezGene: | RAB37 |
HGNC: | 30268 |
UniProt: | A8MUU7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of metencephalon | 2.58e-70 | 9 |
metencephalon | 2.58e-70 | 9 |
future metencephalon | 2.58e-70 | 9 |
cerebellum | 8.15e-60 | 6 |
rhombic lip | 8.15e-60 | 6 |
segmental subdivision of hindbrain | 5.27e-53 | 12 |
hindbrain | 5.27e-53 | 12 |
presumptive hindbrain | 5.27e-53 | 12 |
segmental subdivision of nervous system | 5.24e-49 | 13 |
posterior neural tube | 1.31e-42 | 15 |
chordal neural plate | 1.31e-42 | 15 |
regional part of nervous system | 6.22e-19 | 53 |
regional part of brain | 6.22e-19 | 53 |
neural tube | 5.63e-18 | 56 |
neural rod | 5.63e-18 | 56 |
future spinal cord | 5.63e-18 | 56 |
neural keel | 5.63e-18 | 56 |
brain | 9.02e-15 | 68 |
future brain | 9.02e-15 | 68 |
pons | 2.09e-14 | 3 |
central nervous system | 1.45e-12 | 81 |
neural plate | 1.45e-12 | 82 |
presumptive neural plate | 1.45e-12 | 82 |
neurectoderm | 5.13e-12 | 86 |
nervous system | 2.13e-11 | 89 |
ecto-epithelium | 4.61e-10 | 104 |
adult organism | 2.58e-09 | 114 |
occipital lobe | 3.22e-09 | 5 |
structure with developmental contribution from neural crest | 4.60e-08 | 132 |
brainstem | 7.25e-08 | 6 |