FFCP PHASE1:Hg19::chr12:13061554..13061566,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:13061554..13061566,+
|short_description=p7@GPRC5A
|description=CAGE_peak_7_at_GPRC5A_5end
|association_with_transcript=-436bp_to_ENST00000540125_5end
|En...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9052 | |EntrezGene=9052 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9836 | |HGNC=9836 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-436bp_to_ENST00000540125_5end | |||
|cluster_id=chr12:13061554..13061566,+ | |||
|coexpression_cluster_id=C814 | |||
|description=CAGE_peak_7_at_GPRC5A_5end | |||
|id=chr12:13061554..13061566,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.08e-23!254;CL:0000077!6.93e-11!19;CL:0000076!3.57e-08!62;CL:0002076!9.56e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000077;1.05e-21;19!CL:0000239;5.81e-07;3!CL:1000615;5.81e-07;3!CL:0002306;5.81e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,4.34e-22,19;CL:0000066,7.85e-11,253;CL:0000076,8.87e-08,63;CL:0000213,2.52e-07,58;CL:0000215,2.52e-07,58;CL:0000239,4.46e-07,3;CL:1000615,4.46e-07,3;CL:0002306,4.46e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!9.89e-18!106;DOID:0050687!1.93e-11!143;DOID:1749!1.11e-08!14;DOID:14566!4.80e-07!239;DOID:299!8.97e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:0060084;6.94e-07;3!DOID:127;6.94e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,7.60e-07,3;DOID:127,7.60e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.10e-13!169;UBERON:0000925!1.10e-13!169;UBERON:0006595!1.10e-13!169;UBERON:0001007!1.34e-12!155;UBERON:0001555!1.34e-12!155;UBERON:0007026!1.34e-12!155;UBERON:0004921!3.23e-10!129;UBERON:0004185!3.23e-10!129;UBERON:0001737!3.00e-09!9;UBERON:0004122!4.23e-09!15;UBERON:0000481!5.97e-09!347;UBERON:0003064!9.89e-09!37;UBERON:0003104!1.09e-08!238;UBERON:0009142!1.09e-08!238;UBERON:0008947!1.25e-08!38;UBERON:0003258!1.25e-08!38;UBERON:0002367!2.36e-08!11;UBERON:0010147!2.36e-08!11;UBERON:0009846!2.36e-08!11;UBERON:0003353!2.36e-08!11;UBERON:0004902!2.36e-08!11;UBERON:0003820!2.36e-08!11;UBERON:0009847!2.36e-08!11;UBERON:0000077!3.20e-08!130;UBERON:0001046!3.75e-08!19;UBERON:0000162!4.04e-08!14;UBERON:0001353!4.04e-08!14;UBERON:0000163!4.04e-08!14;UBERON:0006866!4.04e-08!14;UBERON:0000164!4.04e-08!14;UBERON:0000931!4.04e-08!14;UBERON:0005911!5.43e-08!82;UBERON:0000065!6.70e-08!53;UBERON:0003937!2.09e-07!12;UBERON:0005399!2.09e-07!12;UBERON:0006554!2.16e-07!44;UBERON:0005153!3.55e-07!37;UBERON:0001008!4.55e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.46e-08;9!UBERON:0001557;8.46e-08;9!UBERON:0006853;5.81e-07;3!UBERON:0007685;5.81e-07;3!UBERON:0004134;5.81e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,8.65e-08,9;UBERON:0006853,4.46e-07,3;UBERON:0007685,4.46e-07,3;UBERON:0004134,4.46e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.22866968250754,10.4670175195864,0,0,0.495065411840187,0.994192127183747,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0.272906150057846,0,0.306083892370903,0,0,0,0,0,0,0.56738522469114,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,1.73815822752988,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0.130979075497713,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0.560677600142307,0,0,0.311211035399766,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0.204154171254893,0.245668634623536,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0.358779271377724,0,0,0.300091096084402,0.103052529238439,0.257640540045629,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,1.0647612003586,0.674338760312407,0.482022059766964,1.32352767278873,0.435758888184812,0.949082476444386,1.21348177344148,0.98110732562673,1.92373578473195,0,0,0,1.47008711385542,0,0,0,0,0.983907508344908,0.343135620597051,0,0,0,0.0925884451585296,0,0,2.88662684050547,0.115930404975077,0,0,0.462985512576611,0,0.790204397959275,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0.300343057843917,0,0,0.43596006883328,0,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0,0,0.301439377059586,1.74306691720059,2.99918973546171,0,0,0,0,0,0,0,1.02738161275192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0.500170521059677,0.542530047399471,0,0.892144943985809,0.157702415033935,0.234282829985426,0,0,0,0,0,0.173767228936166,0.195801157462741,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.725156697549733,3.60911646545913,0.828728900423067,0.803701137152247,1.45672934405374,0.524497659837696,0,0.847168708148562,0.784349769176855,0,0.211103257785751,0,0.340187410553031,0,0,0.541892875087706,0,1.52925763827023,3.3243040357149,0.895499018888713,0,0,0,0.328014645699706,0.650756789328606,0.309123034943167,0,0,0,0,3.21367859688319,0,0.154048617114644,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0,0.330569830721956,0.192190067365106,0,0.4046311234222,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0.38126038784765,0,0,0,0.78494864019923,0,0,0.117812402345686,0,0,0,0,1.46228093778771,0,0.682499557039929,0.848432591722276,0,1.10273068709225,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0.0982490410131212,0,0,0.633322905892992,0,0,0,0,0,1.08890984861323,0.470719003883896,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.95497793895076,0.593929361665277,0.921482106297696,0,0,0.333926115068718,0,0,0.19924798825107,0.276283915531148,0,0.20453736500431,0,0,0.718946809178615,0.716084698702437,0,0.197286811273867,0,0,0,0,0,0,0,0,0.227586896570999,0.508507300585533,0.472775363535873,0,0,0,0,0,0,0,0,0,0.10893846351899,0.41827123283581,0,0,0,0.179515288819544,0.217294743844016,0.638002319463839,0.274792780205587,2.66517388009317,0,0,0,0,0,0,0,0,0.421996129056054,0.816164040795739,0.424059214301822,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0.150323419414493,0,0,0.992975867626496,0,2.38944859545918,0,0,0.867798691675654,0.195984794828755,0.609414446062818,0,0,0.870806981601766,0.511625219603299,0.656923656425674,0,0,0,0.137041924646751,0,0,0.977756913674015,0,0.426905989478705,0.19980960958213,0.72045208577053,0,0,0.720273989940749,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0,0.998395002494955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,2.17199840701485,0.864221491201268,1.30634944043764,1.19730191562487,0,0,0.113312091520126,0,0,0,0,0.171086837884329,0,1.28144895081234,0.314408610199332,0.414239055347196,0,0,0,1.27668251554036,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0.276697269872462,0.124980407962107,0,0,3.05845565607623,0,0,0,0,0,0.378806010550178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0,0,0.398095888698616,0,0,0,0,0.385239660814607,0,0.782982875895635,0.680117776536817,2.08370226891451,1.71315693154527,1.25362188757041,4.63202170741458,1.75427239662966,0,2.50788249752189,0.675769762612291,0,0,1.51929978088691,0,0,0,0,0,2.94927490504463,0.633936370075881,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0.235939446695481,0.917142992608395,0.808679663052368,0,0,0,0,0,0,0,6.87842053542406,1.03499260351932,0,0,0,0,0,0,0,0,0.638812138197976,0,0,0.606965604236632,0,0,0,0.171488009437418,0,0,1.53651993149159,0,0.078493092850514,0,0.280272163313789,0,0.647782773655864,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,6.18588545068935,0,0,0.111855431797792,0.883352102537187,0.609589624911347,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0.178553938605658,1.41157948686277,0.401206833445841,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0.101988829741982,0,0.36757959813938,1.50424523575425,0,0,0,0,0,0,0,0,0.112131862580613,0.25458863311266,0.404234377916439,0.217716747896961,0,0,0.143444410785353,0.332660356546013,0.162806537221949,1.06727345877715,0,0.359300808426348,0,0,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,1.22866968250754,10.4670175195864,0,0,0.495065411840187,0.994192127183747,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0.272906150057846,0,0.306083892370903,0,0,0,0,0,0,0.56738522469114,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,1.73815822752988,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0.130979075497713,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0.560677600142307,0,0,0.311211035399766,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0.204154171254893,0.245668634623536,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0.358779271377724,0,0,0.300091096084402,0.103052529238439,0.257640540045629,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,1.0647612003586,0.674338760312407,0.482022059766964,1.32352767278873,0.435758888184812,0.949082476444386,1.21348177344148,0.98110732562673,1.92373578473195,0,0,0,1.47008711385542,0,0,0,0,0.983907508344908,0.343135620597051,0,0,0,0.0925884451585296,0,0,2.88662684050547,0.115930404975077,0,0,0.462985512576611,0,0.790204397959275,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0.300343057843917,0,0,0.43596006883328,0,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0,0,0.301439377059586,1.74306691720059,2.99918973546171,0,0,0,0,0,0,0,1.02738161275192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0.500170521059677,0.542530047399471,0,0.892144943985809,0.157702415033935,0.234282829985426,0,0,0,0,0,0.173767228936166,0.195801157462741,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.725156697549733,3.60911646545913,0.828728900423067,0.803701137152247,1.45672934405374,0.524497659837696,0,0.847168708148562,0.784349769176855,0,0.211103257785751,0,0.340187410553031,0,0,0.541892875087706,0,1.52925763827023,3.3243040357149,0.895499018888713,0,0,0,0.328014645699706,0.650756789328606,0.309123034943167,0,0,0,0,3.21367859688319,0,0.154048617114644,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0,0.330569830721956,0.192190067365106,0,0.4046311234222,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0.38126038784765,0,0,0,0.78494864019923,0,0,0.117812402345686,0,0,0,0,1.46228093778771,0,0.682499557039929,0.848432591722276,0,1.10273068709225,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0.0982490410131212,0,0,0.633322905892992,0,0,0,0,0,1.08890984861323,0.470719003883896,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.95497793895076,0.593929361665277,0.921482106297696,0,0,0.333926115068718,0,0,0.19924798825107,0.276283915531148,0,0.20453736500431,0,0,0.718946809178615,0.716084698702437,0,0.197286811273867,0,0,0,0,0,0,0,0,0.227586896570999,0.508507300585533,0.472775363535873,0,0,0,0,0,0,0,0,0,0.10893846351899,0.41827123283581,0,0,0,0.179515288819544,0.217294743844016,0.638002319463839,0.274792780205587,2.66517388009317,0,0,0,0,0,0,0,0,0.421996129056054,0.816164040795739,0.424059214301822,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0.150323419414493,0,0,0.992975867626496,0,2.38944859545918,0,0,0.867798691675654,0.195984794828755,0.609414446062818,0,0,0.870806981601766,0.511625219603299,0.656923656425674,0,0,0,0.137041924646751,0,0,0.977756913674015,0,0.426905989478705,0.19980960958213,0.72045208577053,0,0,0.720273989940749,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0,0.998395002494955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,2.17199840701485,0.864221491201268,1.30634944043764,1.19730191562487,0,0,0.113312091520126,0,0,0,0,0.171086837884329,0,1.28144895081234,0.314408610199332,0.414239055347196,0,0,0,1.27668251554036,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0.276697269872462,0.124980407962107,0,0,3.05845565607623,0,0,0,0,0,0.378806010550178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0,0,0.398095888698616,0,0,0,0,0.385239660814607,0,0.782982875895635,0.680117776536817,2.08370226891451,1.71315693154527,1.25362188757041,4.63202170741458,1.75427239662966,0,2.50788249752189,0.675769762612291,0,0,1.51929978088691,0,0,0,0,0,2.94927490504463,0.633936370075881,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0.235939446695481,0.917142992608395,0.808679663052368,0,0,0,0,0,0,0,6.87842053542406,1.03499260351932,0,0,0,0,0,0,0,0,0.638812138197976,0,0,0.606965604236632,0,0,0,0.171488009437418,0,0,1.53651993149159,0,0.078493092850514,0,0.280272163313789,0,0.647782773655864,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,6.18588545068935,0,0,0.111855431797792,0.883352102537187,0.609589624911347,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0.178553938605658,1.41157948686277,0.401206833445841,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0.101988829741982,0,0.36757959813938,1.50424523575425,0,0,0,0,0,0,0,0,0.112131862580613,0.25458863311266,0.404234377916439,0.217716747896961,0,0,0.143444410785353,0.332660356546013,0.162806537221949,1.06727345877715,0,0.359300808426348,0,0,0,0,0.402547587182052,0 | ||
|short_description=p7@GPRC5A | |||
}} | }} |
Latest revision as of 08:21, 17 September 2015
Short description: | p7@GPRC5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GPRC5A_5end |
Coexpression cluster: | C814_Alveolar_mesothelioma_bile_Renal_papillotubular_papillary_serous |
Association with transcript: | -436bp_to_ENST00000540125_5end |
EntrezGene: | GPRC5A |
HGNC: | 9836 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 4.34e-22 | 19 |
epithelial cell | 7.85e-11 | 253 |
squamous epithelial cell | 8.87e-08 | 63 |
lining cell | 2.52e-07 | 58 |
barrier cell | 2.52e-07 | 58 |
brush border epithelial cell | 4.46e-07 | 3 |
kidney cortex tubule cell | 4.46e-07 | 3 |
epithelial cell of proximal tubule | 4.46e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 8.65e-08 | 9 |
renal cortex tubule | 4.46e-07 | 3 |
region of nephron tubule | 4.46e-07 | 3 |
proximal tubule | 4.46e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 7.60e-07 | 3 |
leiomyoma | 7.60e-07 | 3 |