FFCP PHASE1:Hg19::chr16:66400578..66400600,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1003 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1764 | |||
|TSSclassifier=strong | |||
|UniProt=E7EPJ8 | |||
|association_with_transcript=-19bp_to_ENST00000379531_5end | |||
|cluster_id=chr16:66400578..66400600,+ | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_1_at_CDH5_5end | |||
|id=chr16:66400578..66400600,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.89e-20!24;CL:0000115!3.16e-20!35;CL:0000071!9.40e-16!18;CL:0002546!9.40e-16!18;CL:0002078!1.14e-15!44;CL:0000213!4.11e-09!57;CL:0000215!4.11e-09!57;CL:1000413!7.84e-09!9;CL:0000222!2.29e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.25e-24;24!CL:0000115;2.22e-19;36!CL:0000071;1.07e-18;18!CL:0002078;9.25e-11;45!CL:1000413;2.44e-10;9!CL:0002544;1.87e-07;6!CL:0000213;3.07e-07;58!CL:0000215;3.07e-07;58!CL:0002138;3.17e-07;6!CL:0002543;4.59e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.26e-24,24;CL:0000115,9.94e-23,36;CL:0000071,1.08e-18,18;CL:0002546,1.08e-18,18;CL:0002078,3.07e-16,45;CL:0000213,1.83e-10,58;CL:0000215,1.83e-10,58;CL:1000413,2.44e-10,9;CL:0000222,9.32e-08,121;CL:0002544,1.87e-07,6;CL:0005020,3.17e-07,6;CL:0002138,3.17e-07,6;CL:0005022,3.17e-07,6;CL:0002543,4.59e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.07e-18;18!CL:0005022;3.17e-07;6!UBERON:0006601;9.75e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;1.07e-18;18!UBERON:0001986;1.07e-18;18!UBERON:0004852;1.07e-18;18!UBERON:0000487;3.01e-16;22!UBERON:0000055;1.13e-14;65!UBERON:0001637;2.76e-14;42!UBERON:0003509;2.76e-14;42!UBERON:0004572;2.76e-14;42!UBERON:0006914;2.89e-14;25!UBERON:0007500;3.93e-14;56!UBERON:0001981;3.93e-14;56!UBERON:0004537;3.93e-14;56!UBERON:0007023;1.64e-13;114!UBERON:0004573;2.78e-13;33!UBERON:0004571;2.78e-13;33!UBERON:0007100;7.30e-13;25!UBERON:0003528;1.73e-12;34!UBERON:0002020;1.73e-12;34!UBERON:0000073;1.78e-12;53!UBERON:0002616;1.78e-12;53!UBERON:0002780;2.00e-12;41!UBERON:0001890;2.00e-12;41!UBERON:0001869;2.29e-12;32!UBERON:0001893;2.44e-12;34!UBERON:0002791;2.53e-12;32!UBERON:0002619;1.20e-11;22!UBERON:0002049;3.00e-11;75!UBERON:0007798;3.00e-11;75!UBERON:0001950;1.07e-10;20!UBERON:0000948;1.30e-10;22!UBERON:0000947;2.28e-10;21!UBERON:0010191;2.28e-10;21!UBERON:0003915;2.44e-10;9!UBERON:0004700;2.44e-10;9!UBERON:0001917;2.44e-10;9!UBERON:0000956;2.71e-10;25!UBERON:0000203;2.71e-10;25!UBERON:0001017;5.78e-09;75!UBERON:0001009;9.10e-09;112!UBERON:0003914;1.02e-08;74!UBERON:0000955;1.10e-08;68!UBERON:0000490;1.85e-08;33!UBERON:0004535;2.60e-08;109!UBERON:0001016;1.53e-07;83!UBERON:0004732;2.74e-07;13!UBERON:0002465;3.77e-07;10 | |||
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| |||
|short_description=p1@CDH5 | |||
}} |
Latest revision as of 08:09, 17 September 2015
Short description: | p1@CDH5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CDH5_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | -19bp_to_ENST00000379531_5end |
EntrezGene: | CDH5 |
HGNC: | 1764 |
UniProt: | E7EPJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.26e-24 | 24 |
endothelial cell | 9.94e-23 | 36 |
blood vessel endothelial cell | 1.08e-18 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.08e-18 | 18 |
meso-epithelial cell | 3.07e-16 | 45 |
lining cell | 1.83e-10 | 58 |
barrier cell | 1.83e-10 | 58 |
endothelial cell of artery | 2.44e-10 | 9 |
mesodermal cell | 9.32e-08 | 121 |
aortic endothelial cell | 1.87e-07 | 6 |
lymphangioblast | 3.17e-07 | 6 |
endothelial cell of lymphatic vessel | 3.17e-07 | 6 |
vascular lymphangioblast | 3.17e-07 | 6 |
vein endothelial cell | 4.59e-07 | 6 |