FFCP PHASE1:Hg19::chr1:153940716..153940739,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=148327 | |EntrezGene=148327 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18854 | |HGNC=18854 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T4L0 | |UniProt=Q5T4L0 | ||
|association_with_transcript=0bp_to_ENST00000368600,ENST00000473340,ENST00000479010,ENST00000492729_5end | |association_with_transcript=0bp_to_ENST00000368600,ENST00000473340,ENST00000479010,ENST00000492729_5end | ||
|cluster_id=chr1:153940716..153940739,+ | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_4_at_CREB3L4_5end | |description=CAGE_peak_4_at_CREB3L4_5end | ||
|id=chr1:153940716..153940739,+ | |id=chr1:153940716..153940739,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.70e-09!254 | |ontology_enrichment_celltype=CL:0000066!1.70e-09!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009847;5.49e-08;3!UBERON:0003353;5.49e-08;3!UBERON:0008425;5.57e-07;1!UBERON:0008801;5.89e-07;1!UBERON:0006298;6.40e-07;1 | |||
|ontology_enrichment_disease=DOID:305!4.15e-11!106;DOID:0050687!4.31e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:5093;7.14e-22;4!DOID:1612;7.14e-22;4!DOID:1325;3.60e-07;7!DOID:3904;3.60e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,4.45e-22,4;DOID:1612,4.45e-22,4;DOID:1325,3.41e-07,7;DOID:3904,3.41e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0001007!9.40e-13!155;UBERON:0001555!9.40e-13!155;UBERON:0007026!9.40e-13!155;UBERON:0004119!2.02e-12!169;UBERON:0000925!2.02e-12!169;UBERON:0006595!2.02e-12!169;UBERON:0004921!2.71e-11!129;UBERON:0004185!2.71e-11!129;UBERON:0000466!2.12e-10!126;UBERON:0000464!9.07e-10!104;UBERON:0000077!3.41e-09!130;UBERON:0005178!7.41e-08!34;UBERON:0002224!7.41e-08!34;UBERON:0001041!1.40e-07!98;UBERON:0005181!1.82e-07!35;UBERON:0005911!3.35e-07!82;UBERON:0001048!4.49e-07!168;UBERON:0005177!6.85e-07!107;UBERON:0000915!7.66e-07!52 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;3.25e-12;2!UBERON:0003127;6.74e-12;2!UBERON:0001044;6.12e-09;6!UBERON:0003293;6.12e-09;6!UBERON:0003294;6.12e-09;6!UBERON:0010047;6.12e-09;6!UBERON:0003408;6.12e-09;6!UBERON:0000167;6.12e-09;6!UBERON:0000310;8.22e-09;10!UBERON:0001443;5.15e-08;11!UBERON:0002365;1.10e-07;31!UBERON:0002330;1.10e-07;31!UBERON:0003126;2.39e-07;7!UBERON:0001005;2.39e-07;7!UBERON:0001831;5.89e-07;1!UBERON:0001567;5.89e-07;1!UBERON:0001736;6.40e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,3.35e-12,2;UBERON:0003127,6.76e-12,2;UBERON:0004921,6.00e-09,118;UBERON:0001044,6.13e-09,6;UBERON:0003293,6.13e-09,6;UBERON:0003294,6.13e-09,6;UBERON:0010047,6.13e-09,6;UBERON:0000167,6.13e-09,6;UBERON:0000310,6.86e-09,10;UBERON:0000915,2.54e-08,52;UBERON:0001443,4.38e-08,11;UBERON:0001007,1.25e-07,145;UBERON:0001555,1.25e-07,145;UBERON:0007026,1.25e-07,145;UBERON:0002365,1.52e-07,31;UBERON:0002330,1.52e-07,31;UBERON:0001041,1.74e-07,87;UBERON:0003126,2.94e-07,7;UBERON:0001005,2.94e-07,7;UBERON:0009569,3.08e-07,112;UBERON:0001831,5.90e-07,1;UBERON:0001567,5.90e-07,1;UBERON:0008801,5.90e-07,1;UBERON:0001736,6.59e-07,1;UBERON:0006298,6.59e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,1.05506791291381,0.37129905888014,0,0,0,0,0,0.246242116153576,0,0,0.286235987131057,0,0,0.0764134057479513,0,0,0,0,0,0,0.6024118375565,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0.221729397462564,0,0.851363990735132,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0.269421344139376,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0,0,0.121973706129595,0.397589304964456,0.580969714347592,0.207322110030741,1.26160425437814,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,2.53510069643662,0.982827216677626,1.18157981336281,0,0.983907508344908,0.171567810298526,0,0,0.100528972411631,0.462942225792648,0,0,0,0,0.117408694235822,0.144366447761074,0,0,5.53143078571493,1.71697232418975,0,0,0,1.87467667973554,0.16798212819886,0.283550194484773,0.0895585227028483,0,0,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0.604780586659361,0.248107807818777,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0.120859449591622,0,0,0,0.182091168006717,0,0.451199612907412,0.385076685522074,0,0,0,0,0,0,0,0,0,0.764628819135115,0.831076008928724,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0.574265537996172,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0.382838137483752,0,0,0,1.3940745403212,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0.191505370132367,0,0.324621940274555,0,0,0,2.50634477090067,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0.63337622438398,0.398495976502139,0.276283915531148,0.251932747854276,0,0,0,0.629078458031288,0,0,0,0,0,0,0,0,3.9064164162785,51.7763199977479,0,0.227586896570999,1.27126825146383,0.236387681767936,0,0,0,0,0,0,0.221158519862449,1.18219047581419,0,0.10893846351899,0,1.69290568708354,0,0,0.359030577639089,0,0,0,0.533034776018635,0,0.156980256395025,0.166211681900156,0,0.19606253431774,0,0.189753732724185,0.158936578980379,0,0,0.141353071433941,0,0,0.707660516026713,1.22206028986725,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,1.57833761139756,2.41981432097328,0.61214552326098,0,0,0,0,0,0,0,0.569219092059585,0,0.867798691675654,0,0.435296032902013,0.17472666824203,0,0,0,0,0.290967049465258,0,0,0,0,0,0.977756913674015,0.0801588202515337,1.92107695265417,0,0,0,0,0,0.49701014226173,1.41416420770077,0.135904206073614,0,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,1.16495949527454,0.0787831823072236,0,0,0,0.0846733320657845,0,0,0.643012593860077,0.137539436597234,0,0,0.77380195455795,0,0.335434687599266,0.157611414598396,0.472091293214983,0,0,0.575745591958336,0,0,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,0.129282956361551,0.13223260174269,0.171086837884329,0,0.320362237703084,0.314408610199332,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0.124980407962107,0,0,0.235265819698172,1.40500471742064,0.724605143054126,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0.150257608997218,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0.431299245586727,0,0.109209638192014,0,0,0,0,0,0.0788617450012534,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.808679663052368,0,0,0.198916222116275,0.150420656698515,0,0.781514011233092,0,0.163771917510097,0.443568258651136,0,0.781078098613847,0.206686796501184,0,0,18.092506306287,1.48863353516788,0.175871244359621,0.127762427639595,0,0,0,0,0,0,0,0,0,0,1.33477682270483,7.37835072794832,0,0,0.913158720509496,0,0,0.0714765441766563,0,0.929931402945002,0,0,0,0,0,12.9068207646083,0,0,0.846774100381858,0.68732060563215,0,0,0.559277158988962,0.588901401691458,0.243835849964539,0,0,0,1.94284397223656,1.16969731731053,0.994753875806841,0,1.6941912305844,0,3.32118255846682,0.926089897295336,0.218559560503957,0,0,2.12108892391463,0,0,0,0,0,0,0,0,0,0.240724100067505,0.730336388246517,12.8444199353271,0,0.315543124386369,0,0.436350690340377,4.2322147241232,0,0,0,0.126166424835079,0,0.126698501011437,0.815910637935854,0.534434810531121,0.18378979906969,0,0.0757786982182394,0,0,0,2.34557380091079,0.714193294391221,0,0.124149428591716,0.112131862580613,0.636471582781649,0.808468755832877,0.217716747896961,0.684466602170562,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| ||
|short_description=p4@CREB3L4 | |short_description=p4@CREB3L4 | ||
}} | }} |
Latest revision as of 08:00, 17 September 2015
Short description: | p4@CREB3L4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CREB3L4_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | 0bp_to_ENST00000368600, ENST00000473340, ENST00000479010, ENST00000492729_5end |
EntrezGene: | CREB3L4 |
HGNC: | 18854 |
UniProt: | Q5T4L0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 3.35e-12 | 2 |
open tracheal system trachea | 6.76e-12 | 2 |
subdivision of digestive tract | 6.00e-09 | 118 |
saliva-secreting gland | 6.13e-09 | 6 |
gland of oral region | 6.13e-09 | 6 |
gland of foregut | 6.13e-09 | 6 |
oral gland | 6.13e-09 | 6 |
oral cavity | 6.13e-09 | 6 |
breast | 6.86e-09 | 10 |
thoracic segment of trunk | 2.54e-08 | 52 |
chest | 4.38e-08 | 11 |
digestive system | 1.25e-07 | 145 |
digestive tract | 1.25e-07 | 145 |
primitive gut | 1.25e-07 | 145 |
exocrine gland | 1.52e-07 | 31 |
exocrine system | 1.52e-07 | 31 |
foregut | 1.74e-07 | 87 |
trachea | 2.94e-07 | 7 |
respiratory airway | 2.94e-07 | 7 |
subdivision of trunk | 3.08e-07 | 112 |
parotid gland | 5.90e-07 | 1 |
cheek | 5.90e-07 | 1 |
parotid gland primordium | 5.90e-07 | 1 |
submandibular gland | 6.59e-07 | 1 |
submandibular gland primordium | 6.59e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 4.45e-22 | 4 |
breast cancer | 4.45e-22 | 4 |
bronchus cancer | 3.41e-07 | 7 |
bronchogenic carcinoma | 3.41e-07 | 7 |