FFCP PHASE1:Hg19::chr12:12966271..12966302,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51202 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18682 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H0S4,F5H1N9,Q9UI98 | |||
|association_with_transcript=0bp_to_ENST00000358007,ENST00000426619,ENST00000542123,ENST00000544032,ENST00000544400,ENST00000544497,ENST00000545038,NM_016355,NM_201224_5end | |||
|cluster_id=chr12:12966271..12966302,+ | |||
|description=CAGE_peak_1_at_DDX47_5end | |||
|id=chr12:12966271..12966302,+ | |||
|ontology_enrichment_celltype=CL:0000003!9.78e-14!722;CL:0000012!2.73e-13!682;CL:0000542!7.90e-13!53;CL:0000051!7.90e-13!53;CL:0000838!1.22e-12!52;CL:0000548!2.55e-12!679;CL:0000004!2.55e-12!679;CL:0000255!2.55e-12!679;CL:0000063!1.31e-08!578;CL:0000945!4.08e-08!24;CL:0000826!4.08e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.46e-08;24!CL:0000542;7.39e-08;53!CL:0000236;7.71e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,7.90e-13,53;CL:0000051,7.90e-13,53;CL:0000838,1.22e-12,52;CL:0000945,4.08e-08,24;CL:0000826,4.08e-08,24 | |||
|ontology_enrichment_development_v019=CL:0000051;7.39e-08;53 | |||
|ontology_enrichment_disease=DOID:305!1.82e-16!106;DOID:14566!2.10e-15!239;DOID:0050687!6.35e-15!143;DOID:162!2.37e-14!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.82e-16,106;DOID:14566,2.10e-15,239;DOID:0050687,6.35e-15,143;DOID:162,2.37e-14,235 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.06e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.99e-07;9!UBERON:0001557;3.99e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.06e-07,9 | |||
|phase1_expression=51.0516245750264,44.9611100171065,49.052132625398,51.0373821600965,42.4613039705923,65.4253893075277,43.0609792886128,53.0644693678538,39.9614011145753,24.5733936501509,10.4670175195864,28.1789370047922,13.979649846108,40.8428964768154,27.505982185417,75.3004164025988,63.8856199705416,78.8734897618363,41.9622206959836,24.9935747895879,16.3200552995402,8.77673220138646,50.9500057093281,42.7048206227399,43.5632959393966,81.3802771215681,79.8838735347972,75.9559039677005,34.6160563627036,74.8467326289565,40.0973759388637,34.0185853057203,29.5181800402685,29.2105668031762,43.0717635226477,66.2508623391384,55.784083473621,45.427623499614,31.4854782528122,32.3346197366619,36.0503913526278,32.389366601898,27.8181613044921,17.7385851311069,22.2946806776398,24.0158220575938,16.5024616203036,23.4365696172441,39.3327091036782,17.5492359316512,24.5914278267937,50.1342327363801,25.1664346937732,39.3745656986134,36.5651513804723,17.5065375774622,28.6551457560738,38.8771628089996,17.7528657575123,32.7347607617615,38.9995646737415,17.1522676097092,24.5340298874607,27.2783840340924,22.346111374401,26.0997203357924,47.3344909236637,18.0899038984855,25.5526630025899,38.8768032022159,27.2429776185016,43.8250386825202,56.9632297393592,64.6441176114542,60.8048297900025,61.6396417794625,39.9889926881523,40.0972303886822,44.8424386884854,47.5971282047885,51.9172527489625,60.0965065885646,63.3586480060762,68.2673264077664,75.6082865784022,86.1995049584345,71.6708816794462,77.5915793938552,66.1044872784862,53.4270102539804,109.858103038124,136.826265123429,144.117007003211,64.7639510037227,98.6495070847503,58.7346509048422,122.746896551032,73.886023396843,59.8300362088572,58.180900395956,110.161726122154,113.627473376336,62.3445530905316,49.4662428570171,75.4191123135583,70.0047106884243,62.8264963934836,43.5510487067296,37.1969734021252,41.4383519601264,41.4525026678773,61.1484510900961,83.48533506024,94.174371487579,68.9934457112847,45.0971183936313,72.4286732907631,61.1656852959081,75.6528879138313,58.9346016499579,56.6442604855084,59.8784788002476,70.7703059665532,79.223712304585,46.224368824368,48.5393366690235,60.7634717721574,96.1664165181974,64.9879675753923,85.5912226947342,19.5045493051169,44.26625674044,59.7118163809287,30.7223279526881,53.1418185274043,36.5013227781276,62.0323038699857,25.3050132557371,57.5717036529173,52.9933259935528,50.7685061306269,33.8580910161587,12.0217445136539,12.977455497455,28.8847180352668,23.3333847981018,26.4586341432542,56.7607685846714,45.7595928624102,60.5475727167191,54.0633748037438,47.3129027308368,42.6982816977341,41.2674797604527,38.5939481313113,39.0667619554896,53.9207013664971,42.6387652629393,41.2688864716584,41.5053559828191,29.8093694660769,42.5752379202367,22.9418334095279,52.5758204894592,45.3679490813785,66.4389978433554,34.1284646391778,31.9816604572635,36.795992991812,60.7530022123603,40.1211819207592,11.8602375692457,3.87780264148325,10.4662572514208,38.7638122322348,53.6913369457818,104.735662023256,66.5460960137248,46.8162264501831,57.1891152145153,37.3621485053967,36.7534647141568,51.3498208409614,38.3925415398611,49.8558804496049,25.7307626996383,28.8087962239999,13.1220001826926,46.1996913708874,55.906238511356,47.8235777765763,45.447150975137,49.0475021435439,58.0061831680286,57.7756304651348,59.5746438962075,35.234091380936,38.0160914330257,28.435696867034,18.2032272387605,10.0606539854273,61.4426815932342,49.1715783096819,42.1137455535958,30.2894558407778,42.9082914118627,22.3854707770829,58.1907099610908,92.9238312868305,64.7078888120259,66.3346850629429,90.9276021135739,81.6176031568436,105.890261958754,62.3491468710826,64.3037825839224,63.7238013754239,106.527052731016,64.2508292523249,65.4666530116188,80.9421870937881,66.093376437332,65.4503886318482,39.6184748984759,43.9121254151244,43.0206893083506,69.646986199999,61.4938125011692,84.4729964661399,53.2817822779004,69.8928756925491,62.4111284019669,50.0638503455411,32.1620469096443,46.9658732598434,56.6528872199014,41.1471304551664,109.670403636935,103.679584398033,107.9729413878,107.426329441352,100.006664838414,113.178085315993,107.190889987331,106.155812632812,111.191928357507,21.4065081841148,8.41450642820675,15.6398124305932,5.88034845542168,35.4914097501126,40.2959158837827,31.9026549607958,41.9389944443918,86.3378838572657,57.132080829409,42.3636101677295,44.9607013030478,58.6083909159808,50.2755257210816,16.9420318761369,13.5191522086345,83.7121783746585,46.3721619900307,46.3764342231496,54.1374179104027,49.0764643331207,58.4080247360217,26.8669495306154,42.9243081047436,31.5157767791869,35.3346440360249,21.8487808564431,56.2403003920662,66.0169763821518,62.2392676894077,49.3467460092694,60.742493149418,58.6575499122773,74.8848121601834,36.7161969835153,35.6604358730128,43.2359860250884,37.9989724613404,30.8599766259942,32.4690161724536,23.4434894420094,18.8179690624976,47.1978191508255,45.0514586765876,42.016485596695,26.126542652469,35.3127655754957,54.0503166500402,62.3089669952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| |||
|short_description=p1@DDX47 | |||
}} |
Latest revision as of 07:58, 17 September 2015
Short description: | p1@DDX47 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DDX47_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000358007, ENST00000426619, ENST00000542123, ENST00000544032, ENST00000544400, ENST00000544497, ENST00000545038, NM_016355, NM_201224_5end |
EntrezGene: | DDX47 |
HGNC: | 18682 |
UniProt: | Q9H0S4F5H1N9Q9UI98 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 7.90e-13 | 53 |
common lymphoid progenitor | 7.90e-13 | 53 |
lymphoid lineage restricted progenitor cell | 1.22e-12 | 52 |
lymphocyte of B lineage | 4.08e-08 | 24 |
pro-B cell | 4.08e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.06e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.82e-16 | 106 |
disease of cellular proliferation | 2.10e-15 | 239 |
cell type cancer | 6.35e-15 | 143 |
cancer | 2.37e-14 | 235 |