FFCP PHASE1:Hg19::chr10:14646391..14646408,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83641 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23726 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H098 | |||
|association_with_transcript=-3bp_to_ENST00000468747_5end | |||
|cluster_id=chr10:14646391..14646408,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_FAM107B_5end | |||
|id=chr10:14646391..14646408,- | |||
|ontology_enrichment_celltype=CL:0000738!1.43e-38!140;CL:0002031!1.30e-31!124;CL:0002087!1.68e-31!119;CL:0000037!1.69e-31!172;CL:0000566!1.69e-31!172;CL:0002032!2.05e-31!165;CL:0000837!2.05e-31!165;CL:0000988!2.35e-29!182;CL:0000766!5.53e-21!76;CL:0002057!1.50e-19!42;CL:0000860!4.19e-19!45;CL:0000557!4.64e-19!71;CL:0002009!1.22e-16!65;CL:0000763!2.19e-16!112;CL:0000049!2.19e-16!112;CL:0000839!3.85e-16!70;CL:0002194!7.81e-16!63;CL:0000576!7.81e-16!63;CL:0000040!7.81e-16!63;CL:0000559!7.81e-16!63;CL:0000542!9.45e-15!53;CL:0000051!9.45e-15!53;CL:0000838!2.13e-14!52;CL:0000945!1.55e-08!24;CL:0000826!1.55e-08!24;CL:0002139!6.96e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.66e-18;33!CL:0002057;5.66e-18;33!CL:0000473;1.96e-14;39!CL:0000234;1.96e-14;39!CL:0000576;9.40e-13;48!CL:0000766;6.99e-11;69!CL:0002087;1.06e-10;104!CL:0000542;2.63e-09;53!CL:0000738;1.16e-08;136!CL:0000945;1.55e-08;24!CL:0002139;6.99e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.74e-38,136;CL:0002031,1.57e-31,120;CL:0002087,1.91e-31,115;CL:0000037,3.02e-31,168;CL:0002032,3.54e-31,161;CL:0000837,3.54e-31,161;CL:0000988,1.02e-28,177;CL:0000766,5.25e-21,72;CL:0000860,1.50e-19,42;CL:0002057,1.50e-19,42;CL:0000557,4.49e-19,67;CL:0000473,6.43e-19,48;CL:0000234,6.43e-19,48;CL:0002009,1.22e-16,61;CL:0000763,3.60e-16,108;CL:0000049,3.60e-16,108;CL:0000839,4.36e-16,66;CL:0002194,7.98e-16,59;CL:0000576,7.98e-16,59;CL:0000040,7.98e-16,59;CL:0000559,7.98e-16,59;CL:0000542,9.19e-15,53;CL:0000051,9.19e-15,53;CL:0000838,2.07e-14,52;CL:0000945,1.55e-08,24;CL:0000826,1.55e-08,24;CL:0002139,6.96e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;9.79e-15;42!CL:0000051;2.63e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.76e-20!112;UBERON:0002390!1.65e-19!102;UBERON:0003061!1.65e-19!102;UBERON:0002405!3.31e-16!115;UBERON:0002371!1.65e-15!80;UBERON:0001474!3.14e-13!86;UBERON:0004765!1.86e-10!101;UBERON:0001434!1.86e-10!101;UBERON:0003081!1.15e-08!216;UBERON:0007023!1.24e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.18e-19,108;UBERON:0002390,2.34e-19,98;UBERON:0003061,2.34e-19,98;UBERON:0002405,2.42e-16,93;UBERON:0002371,2.19e-15,76;UBERON:0001474,4.81e-13,82;UBERON:0004765,1.61e-09,90;UBERON:0003081,1.61e-09,203;UBERON:0001434,3.60e-09,100;UBERON:0007023,1.40e-07,114 | |||
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| |||
|short_description=p1@FAM107B | |||
}} |
Latest revision as of 07:52, 17 September 2015
Short description: | p1@FAM107B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM107B_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -3bp_to_ENST00000468747_5end |
EntrezGene: | FAM107B |
HGNC: | 23726 |
UniProt: | Q9H098 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.74e-38 | 136 |
hematopoietic lineage restricted progenitor cell | 1.57e-31 | 120 |
nongranular leukocyte | 1.91e-31 | 115 |
hematopoietic stem cell | 3.02e-31 | 168 |
hematopoietic oligopotent progenitor cell | 3.54e-31 | 161 |
hematopoietic multipotent progenitor cell | 3.54e-31 | 161 |
hematopoietic cell | 1.02e-28 | 177 |
myeloid leukocyte | 5.25e-21 | 72 |
classical monocyte | 1.50e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.50e-19 | 42 |
granulocyte monocyte progenitor cell | 4.49e-19 | 67 |
defensive cell | 6.43e-19 | 48 |
phagocyte | 6.43e-19 | 48 |
macrophage dendritic cell progenitor | 1.22e-16 | 61 |
myeloid cell | 3.60e-16 | 108 |
common myeloid progenitor | 3.60e-16 | 108 |
myeloid lineage restricted progenitor cell | 4.36e-16 | 66 |
monopoietic cell | 7.98e-16 | 59 |
monocyte | 7.98e-16 | 59 |
monoblast | 7.98e-16 | 59 |
promonocyte | 7.98e-16 | 59 |
lymphocyte | 9.19e-15 | 53 |
common lymphoid progenitor | 9.19e-15 | 53 |
lymphoid lineage restricted progenitor cell | 2.07e-14 | 52 |
lymphocyte of B lineage | 1.55e-08 | 24 |
pro-B cell | 1.55e-08 | 24 |
endothelial cell of vascular tree | 6.96e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.18e-19 | 108 |
hematopoietic system | 2.34e-19 | 98 |
blood island | 2.34e-19 | 98 |
immune system | 2.42e-16 | 93 |
bone marrow | 2.19e-15 | 76 |
bone element | 4.81e-13 | 82 |
skeletal element | 1.61e-09 | 90 |
lateral plate mesoderm | 1.61e-09 | 203 |
skeletal system | 3.60e-09 | 100 |
adult organism | 1.40e-07 | 114 |