FFCP PHASE1:Hg19::chr4:20985547..20985564,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:20985547..20985564,- to FFCP PHASE1:Hg19::chr4:20985547..20985564,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80333 | |EntrezGene=80333 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30083 | |HGNC=30083 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000382149_5end | |||
|cluster_id=chr4:20985547..20985564,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_17_at_KCNIP4_5end | |||
|id=chr4:20985547..20985564,- | |||
|ontology_enrichment_celltype=CL:0000064!2.03e-14!3;CL:0005012!2.03e-14!3;CL:0000067!2.03e-14!3;CL:0002304!2.03e-14!3 | |||
|ontology_enrichment_celltype_v019=CL:0000064;1.47e-09;3!CL:0000067;1.47e-09;3!CL:0005012;1.47e-09;3!CL:0002304;1.47e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.54e-09,3;CL:0000067,1.54e-09,3;CL:0005012,1.54e-09,3;CL:0002304,1.54e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0001045;6.72e-26;1!UBERON:0003056;1.47e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!1.12e-37!86;UBERON:0007284!1.12e-37!86;UBERON:0002346!1.03e-35!90;UBERON:0005743!2.59e-34!86;UBERON:0001017!1.66e-33!82;UBERON:0001049!1.96e-33!57;UBERON:0005068!1.96e-33!57;UBERON:0006241!1.96e-33!57;UBERON:0007135!1.96e-33!57;UBERON:0000073!1.70e-30!94;UBERON:0001016!1.70e-30!94;UBERON:0000955!6.47e-29!69;UBERON:0006238!6.47e-29!69;UBERON:0002616!2.71e-26!59;UBERON:0000033!6.82e-26!123;UBERON:0003056!9.70e-26!61;UBERON:0007023!1.44e-24!115;UBERON:0000153!2.23e-24!129;UBERON:0007811!2.23e-24!129;UBERON:0003076!1.35e-21!15;UBERON:0003057!1.35e-21!15;UBERON:0004121!2.11e-21!169;UBERON:0000924!9.67e-21!173;UBERON:0006601!9.67e-21!173;UBERON:0000488!3.69e-18!4;UBERON:0002020!1.44e-17!34;UBERON:0003528!1.44e-17!34;UBERON:0002780!8.34e-17!41;UBERON:0001890!8.34e-17!41;UBERON:0006240!8.34e-17!41;UBERON:0004733!1.47e-16!12;UBERON:0002028!1.47e-16!12;UBERON:0007277!1.47e-16!12;UBERON:0002619!1.64e-16!22;UBERON:0003080!2.42e-16!42;UBERON:0001869!8.33e-16!32;UBERON:0004732!3.25e-15!13;UBERON:0001893!9.24e-15!34;UBERON:0001950!1.43e-14!20;UBERON:0001778!2.03e-14!3;UBERON:0001775!2.03e-14!3;UBERON:0000956!2.19e-14!25;UBERON:0000203!2.19e-14!25;UBERON:0000988!2.34e-13!3;UBERON:0002298!3.39e-13!8;UBERON:0000970!5.97e-13!20;UBERON:0002791!9.43e-13!33;UBERON:0000064!9.72e-13!219;UBERON:0002104!2.86e-12!21;UBERON:0002203!3.86e-12!6;UBERON:0001768!3.86e-12!6;UBERON:0000063!8.99e-12!97;UBERON:0002680!1.19e-11!9;UBERON:0001895!1.19e-11!9;UBERON:0010092!1.19e-11!9;UBERON:0000200!2.10e-11!6;UBERON:0000020!4.34e-11!23;UBERON:0000019!1.33e-10!19;UBERON:0000047!1.33e-10!19;UBERON:0004088!1.33e-10!19;UBERON:0003072!1.33e-10!19;UBERON:0003071!1.33e-10!19;UBERON:0004128!1.33e-10!19;UBERON:0001032!1.43e-10!24;UBERON:0004456!1.43e-10!24;UBERON:0001905!1.46e-10!2;UBERON:0002757!1.46e-10!2;UBERON:0010134!1.46e-10!2;UBERON:0002784!1.46e-10!2;UBERON:0005408!1.46e-10!2;UBERON:0001899!1.46e-10!2;UBERON:0007625!6.59e-10!11;UBERON:0001870!9.21e-10!2;UBERON:0002148!9.21e-10!2;UBERON:0009662!9.21e-10!2;UBERON:0001456!1.69e-09!21;UBERON:0000481!5.90e-09!347;UBERON:0000025!1.02e-08!194;UBERON:0001801!1.03e-07!14;UBERON:0000483!1.03e-07!309;UBERON:0000119!1.43e-07!312;UBERON:0000062!1.84e-07!511;UBERON:0000477!2.61e-07!286;UBERON:0000475!2.80e-07!365;UBERON:0000059!8.73e-07!11;UBERON:0006331!9.02e-07!3;UBERON:0002240!9.28e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;8.81e-51;2!UBERON:0002757;8.81e-51;2!UBERON:0010134;8.81e-51;2!UBERON:0005408;8.81e-51;2!UBERON:0001899;8.81e-51;2!UBERON:0003296;5.23e-26;4!UBERON:0010133;5.23e-26;4!UBERON:0002784;5.23e-26;4!UBERON:0001154;6.72e-26;1!UBERON:0001153;6.72e-26;1!UBERON:0009854;6.72e-26;1!UBERON:0001894;2.47e-15;7!UBERON:0001954;1.14e-13;2!UBERON:0002148;1.14e-13;2!UBERON:0006331;1.14e-13;2!UBERON:0009662;1.14e-13;2!UBERON:0003022;1.14e-13;2!UBERON:0002421;1.14e-13;2!UBERON:0002600;1.14e-13;2!UBERON:0000988;1.47e-09;3!UBERON:0001778;1.47e-09;3!UBERON:0001775;1.47e-09;3!UBERON:0002780;6.52e-08;41!UBERON:0001890;6.52e-08;41!UBERON:0000488;1.75e-07;4!UBERON:0009856;1.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,8.82e-51,2;UBERON:0002757,8.82e-51,2;UBERON:0010134,8.82e-51,2;UBERON:0005408,8.82e-51,2;UBERON:0001899,8.82e-51,2;UBERON:0003296,5.23e-26,4;UBERON:0010133,5.23e-26,4;UBERON:0002784,5.23e-26,4;UBERON:0001154,1.26e-25,1;UBERON:0001153,1.26e-25,1;UBERON:0001045,1.26e-25,1;UBERON:0001894,2.47e-15,7;UBERON:0006222,2.47e-15,7;UBERON:0003075,1.11e-14,82;UBERON:0007284,1.11e-14,82;UBERON:0003056,1.54e-14,61;UBERON:0002346,5.23e-14,86;UBERON:0001954,8.28e-14,2;UBERON:0003022,8.28e-14,2;UBERON:0002421,8.28e-14,2;UBERON:0002600,8.28e-14,2;UBERON:0002148,1.07e-13,2;UBERON:0006331,1.07e-13,2;UBERON:0009662,1.07e-13,2;UBERON:0000955,6.68e-13,68;UBERON:0006238,6.68e-13,68;UBERON:0000073,8.40e-12,53;UBERON:0002616,8.40e-12,53;UBERON:0010371,1.31e-11,104;UBERON:0001049,3.41e-11,56;UBERON:0005068,3.41e-11,56;UBERON:0006241,3.41e-11,56;UBERON:0007135,3.41e-11,56;UBERON:0001017,6.76e-11,81;UBERON:0002780,5.72e-10,41;UBERON:0001890,5.72e-10,41;UBERON:0003080,5.72e-10,41;UBERON:0006240,5.72e-10,41;UBERON:0001016,7.76e-10,89;UBERON:0000988,1.41e-09,3;UBERON:0001778,1.54e-09,3;UBERON:0001775,1.54e-09,3;UBERON:0010314,3.70e-09,132;UBERON:0000488,1.80e-07,4;UBERON:0003528,4.68e-07,34;UBERON:0002020,4.68e-07,34;UBERON:0004121,5.65e-07,171;UBERON:0000924,5.65e-07,171;UBERON:0006601,5.65e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,1.10864698731282,0.87834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0.295547618953547,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.442287822516696,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.189932387867636,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,1.19009341568421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0,0,0.554645257684261,0.18628920882415,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0,0,0,0,0,0,8.57122937405259,23.2035768330989,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0.913158720509496,0,0,0.428859265059938,1.10609528212909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.694567422971502,0,0,0,0,0.392616934229891,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,1.10864698731282,0.87834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0.295547618953547,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.442287822516696,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.189932387867636,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,1.19009341568421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0,0,0.554645257684261,0.18628920882415,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0,0,0,0,0,0,8.57122937405259,23.2035768330989,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0.913158720509496,0,0,0.428859265059938,1.10609528212909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.694567422971502,0,0,0,0,0.392616934229891,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p17@KCNIP4 | |||
}} | }} |
Latest revision as of 07:46, 17 September 2015
Short description: | p17@KCNIP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_KCNIP4_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_ENST00000382149_5end |
EntrezGene: | KCNIP4 |
HGNC: | 30083 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.54e-09 | 3 |
ciliated epithelial cell | 1.54e-09 | 3 |
multi-ciliated epithelial cell | 1.54e-09 | 3 |
non-pigmented ciliary epithelial cell | 1.54e-09 | 3 |