FFCP PHASE1:Hg19::chr17:7239904..7239915,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:7239904..7239915,+
|short_description=p2@ACAP1
|description=CAGE_peak_2_at_ACAP1_5end
|association_with_transcript=56bp_to_ENST00000158762,NM_014716,uc002...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9744 | |EntrezGene=9744 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16467 | |HGNC=16467 | ||
|TSSclassifier=strong | |||
|UniProt=Q15027 | |UniProt=Q15027 | ||
|association_with_transcript=56bp_to_ENST00000158762,NM_014716,uc002ggd.2_5end | |||
|cluster_id=chr17:7239904..7239915,+ | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_2_at_ACAP1_5end | |||
|id=chr17:7239904..7239915,+ | |||
|ontology_enrichment_celltype=CL:0000037!5.84e-51!172;CL:0000566!5.84e-51!172;CL:0000988!2.58e-50!182;CL:0000542!7.93e-47!53;CL:0000051!7.93e-47!53;CL:0000838!2.81e-46!52;CL:0002032!4.12e-46!165;CL:0000837!4.12e-46!165;CL:0000738!1.79e-39!140;CL:0002087!9.74e-30!119;CL:0002031!4.28e-27!124;CL:0000084!7.77e-24!25;CL:0000827!7.77e-24!25;CL:0000945!4.45e-20!24;CL:0000826!4.45e-20!24;CL:0000791!1.81e-19!18;CL:0000789!1.81e-19!18;CL:0002420!1.81e-19!18;CL:0002419!1.81e-19!18;CL:0000790!1.81e-19!18;CL:0000236!5.49e-12!14;CL:0000625!3.12e-11!11;CL:0000763!5.96e-11!112;CL:0000049!5.96e-11!112;CL:0000134!6.97e-10!358;CL:0000094!7.69e-10!8;CL:0002320!3.40e-09!365;CL:0000624!7.45e-09!6;CL:0000081!2.21e-08!11;CL:0000219!1.85e-07!390;CL:0000080!2.44e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.86e-36;25!CL:0000791;3.83e-34;18!CL:0000789;3.83e-34;18!CL:0002419;3.83e-34;18!CL:0000542;6.80e-21;53!CL:0000625;2.51e-19;11!CL:0000624;1.42e-14;6!CL:0000775;2.06e-08;3!CL:0000898;3.50e-08;3!CL:0000094;1.82e-07;8!CL:0000081;3.21e-07;11!CL:0000623;4.51e-07;3!CL:0000226;8.62e-07;3!CL:0000842;8.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.37e-39,52;CL:0000542,2.02e-38,53;CL:0000051,2.02e-38,53;CL:0000084,8.53e-37,25;CL:0000827,8.53e-37,25;CL:0000791,2.81e-34,18;CL:0000789,2.81e-34,18;CL:0002420,2.81e-34,18;CL:0002419,2.81e-34,18;CL:0000790,2.81e-34,18;CL:0000988,8.69e-23,177;CL:0000037,2.32e-21,168;CL:0000625,2.25e-19,11;CL:0000738,4.20e-19,136;CL:0002032,2.09e-17,161;CL:0000837,2.09e-17,161;CL:0002087,1.33e-16,115;CL:0000624,1.11e-14,6;CL:0002031,1.62e-12,120;CL:0000775,2.31e-08,3;CL:0000898,2.73e-08,3;CL:0000094,1.97e-07,8;CL:0000081,3.42e-07,11;CL:0000623,4.02e-07,3;CL:0000825,4.02e-07,3;CL:0000226,7.70e-07,3;CL:0000842,7.70e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;3.83e-34;18!CL:0000051;6.80e-21;53 | |||
|ontology_enrichment_disease=DOID:2531!1.53e-17!51;DOID:0060083!1.53e-17!51;DOID:1240!2.71e-11!39;DOID:0060058!7.93e-10!10;DOID:8692!3.06e-07!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!8.54e-17!15;UBERON:0000179!8.54e-17!15;UBERON:0000463!8.54e-17!15;UBERON:0002390!3.34e-10!102;UBERON:0003061!3.34e-10!102;UBERON:0002193!1.47e-09!112;UBERON:0002384!2.83e-08!375;UBERON:0004177!3.70e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.96e-29;15!UBERON:0000179;3.96e-29;15!UBERON:0000463;3.96e-29;15!UBERON:0002390;1.53e-22;32!UBERON:0002193;1.72e-13;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.31e-29,15;UBERON:0000179,5.31e-29,15;UBERON:0000463,5.31e-29,15;UBERON:0002370,1.98e-09,4;UBERON:0005058,1.98e-09,4;UBERON:0009113,1.98e-09,4;UBERON:0003295,1.98e-09,4;UBERON:0005562,1.98e-09,4;UBERON:0004177,8.38e-08,7;UBERON:0005057,8.38e-08,7 | |||
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| ||
|short_description=p2@ACAP1 | |||
}} | }} |
Latest revision as of 07:26, 17 September 2015
Short description: | p2@ACAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ACAP1_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 56bp_to_ENST00000158762, NM_014716, uc002ggd.2_5end |
EntrezGene: | ACAP1 |
HGNC: | 16467 |
UniProt: | Q15027 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.37e-39 | 52 |
lymphocyte | 2.02e-38 | 53 |
common lymphoid progenitor | 2.02e-38 | 53 |
T cell | 8.53e-37 | 25 |
pro-T cell | 8.53e-37 | 25 |
mature alpha-beta T cell | 2.81e-34 | 18 |
alpha-beta T cell | 2.81e-34 | 18 |
immature T cell | 2.81e-34 | 18 |
mature T cell | 2.81e-34 | 18 |
immature alpha-beta T cell | 2.81e-34 | 18 |
hematopoietic cell | 8.69e-23 | 177 |
hematopoietic stem cell | 2.32e-21 | 168 |
CD8-positive, alpha-beta T cell | 2.25e-19 | 11 |
leukocyte | 4.20e-19 | 136 |
hematopoietic oligopotent progenitor cell | 2.09e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.09e-17 | 161 |
nongranular leukocyte | 1.33e-16 | 115 |
CD4-positive, alpha-beta T cell | 1.11e-14 | 6 |
hematopoietic lineage restricted progenitor cell | 1.62e-12 | 120 |
neutrophil | 2.31e-08 | 3 |
naive T cell | 2.73e-08 | 3 |
granulocyte | 1.97e-07 | 8 |
blood cell | 3.42e-07 | 11 |
natural killer cell | 4.02e-07 | 3 |
pro-NK cell | 4.02e-07 | 3 |
single nucleate cell | 7.70e-07 | 3 |
mononuclear cell | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 5.31e-29 | 15 |
haemolymphatic fluid | 5.31e-29 | 15 |
organism substance | 5.31e-29 | 15 |
thymus | 1.98e-09 | 4 |
hemolymphoid system gland | 1.98e-09 | 4 |
thymic region | 1.98e-09 | 4 |
pharyngeal gland | 1.98e-09 | 4 |
thymus primordium | 1.98e-09 | 4 |
hemopoietic organ | 8.38e-08 | 7 |
immune organ | 8.38e-08 | 7 |