FFCP PHASE1:Hg19::chr13:39261206..39261220,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=341640 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25396 | |||
|TSSclassifier=strong | |||
|UniProt=Q5SZK8 | |||
|association_with_transcript=33bp_to_NM_207361,uc001uwv.2_5end | |||
|cluster_id=chr13:39261206..39261220,+ | |||
|coexpression_cluster_id=C101 | |||
|description=CAGE_peak_1_at_FREM2_5end | |||
|id=chr13:39261206..39261220,+ | |||
|ontology_enrichment_celltype=CL:0002322!4.24e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.90e-12;5!CL:0002563;1.42e-09;4!CL:0002253;5.31e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.78e-12,5;CL:0002563,1.35e-09,4;CL:0002253,4.53e-09,2;CL:0000047,5.90e-08,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;7.37e-10;4!DOID:1612;7.37e-10;4!DOID:4362;2.52e-07;5!DOID:3119;8.51e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,7.71e-10,4;DOID:1612,7.71e-10,4;DOID:4362,2.70e-07,5;DOID:3119,8.41e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.61e-19!115;UBERON:0001893!3.56e-18!34;UBERON:0001869!5.29e-18!32;UBERON:0002791!2.38e-17!33;UBERON:0000956!7.23e-17!25;UBERON:0000203!7.23e-17!25;UBERON:0002780!1.56e-16!41;UBERON:0001890!1.56e-16!41;UBERON:0006240!1.56e-16!41;UBERON:0003080!5.90e-16!42;UBERON:0001017!7.53e-16!82;UBERON:0005743!1.19e-15!86;UBERON:0002020!4.34e-15!34;UBERON:0003528!4.34e-15!34;UBERON:0001049!8.41e-15!57;UBERON:0005068!8.41e-15!57;UBERON:0006241!8.41e-15!57;UBERON:0007135!8.41e-15!57;UBERON:0001950!1.51e-14!20;UBERON:0002619!2.24e-14!22;UBERON:0000073!5.86e-14!94;UBERON:0001016!5.86e-14!94;UBERON:0002616!5.21e-12!59;UBERON:0000955!8.95e-11!69;UBERON:0006238!8.95e-11!69;UBERON:0003056!1.94e-10!61;UBERON:0002346!2.67e-10!90;UBERON:0003075!9.21e-10!86;UBERON:0007284!9.21e-10!86;UBERON:0000924!1.43e-07!173;UBERON:0006601!1.43e-07!173;UBERON:0001871!2.53e-07!7;UBERON:0004121!4.02e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;8.38e-13;49!UBERON:0001052;1.42e-09;4!UBERON:0001242;1.42e-09;4!UBERON:0001262;1.42e-09;4!UBERON:0004786;1.42e-09;4!UBERON:0004808;1.42e-09;4!UBERON:0001277;1.42e-09;4!UBERON:0004907;9.79e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,1.20e-09,4;UBERON:0001242,1.35e-09,4;UBERON:0001262,1.35e-09,4;UBERON:0004786,1.35e-09,4;UBERON:0004808,1.35e-09,4;UBERON:0001277,1.35e-09,4;UBERON:0004907,8.54e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731842236777572,1.59035721985782,2.78865462886844,4.14644220061482,1.00928340350251,2.18986415445498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,3.07471096357784,0,0,0,0,0,0,0,0,0,0,0,0,0,4.74122638775565,4.29243081047436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.8277978602268,0,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.09758312263869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.307007349452259,0,0,0,0.0852266274161009,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0,0,0.890894042497916,0,0,0.703347082052564,0,0,0,0,0,1.0077309914171,0,0,0,0,0,0,0.295930216910801,0,0,0,0.649376687132959,0,7.812832832557,0.174919999992391,0,0,0.254253650292766,0,0.689486746482929,0,0,0.885741385813839,0.241192877250816,0,0.331737779793674,0,0.219385397153973,0,1.53366118706464,0.0769502585037971,0,0.922255617552241,0,4.78048436456836,0,0,0,0,0,0,0,0,0,0,0,0,0,6.50224128596128,2.81305231664718,0.995261931078505,0.0884575645033392,0,0.889563386041866,0.247127877893006,0.626531697032732,0.471807930864739,0.802577647298789,0,0,0.19566461893209,0,0.394584402849391,2.41981432097328,0.91821828489147,0,1.20258735531594,1.24425829676697,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0,0,0.451961481561065,0,0,0.696418755514666,1.17330829640882,0,0,0,1.00863292007874,0.572682980829578,2.74551996579143,0,0,0,0,0,0,0,0,0,0,0,4.99485973130698,0,0,0.717873024576814,1.99679000498991,0,0,0.403100834920358,0,0,0,0,0,0,0,0,0.136203406111576,2.57205037544031,2.47570985875021,2.9080823662043,0,0,0.789744236554321,0,1.49730843868477,6.13718681179478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,6.9169894243853,3.31391244277756,0,0,0,0,0,0,0,0,5.33983927250797,0,0.122026264901963,0.250381861413,0,0.443716206147409,0.248385611765534,12.1746798743883,0,0,0,0,0.936669811613763,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,5.59964708393804,0,0,0,0,0,0,0,0,0.471797825567689,0,0,0.212574920101683,0.247871528518004,0,0,0,0,0,0,0.385375350578757,0,0.319267718114302,1.02558182120378,1.00828678488687,0.553258019713743,0.161475645631851,0,0,0,0,0,0,0,0,0.376051641746286,0,0,3.14288033377707,0,0.147856086217045,0.270150338473579,0,0.413373593002368,0.570742291745161,0.546974809018219,0,1.48863353516788,0,0.127762427639595,0,0,0,0.227662191351298,0,0,0,0,0.394636641377094,0,0,0.78493092850514,0,0,3.65263488203798,0,0,1.00067161847319,0,0,0.173858272302579,0,0,0,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0.223710863595585,0,0.731507549893617,0,1.95059333026869,1.1598144313382,2.4285549652957,5.38060765962843,42.1775643342101,0.951360726220549,0.33883824611688,0,0,0.231522474323834,0.655678681511872,0,0,0,0.196308467114945,0.297046400327086,0,0,0,1.86927875123374,0,0,0,0,0,0,0,0,0.407948941145488,0,2.1161073620616,0,0,0,0.883164973845552,0.218531143927391,2.91406552326305,0.713921808193872,0.534434810531121,0.36757959813938,0,0.227336094654718,0,0,0.517164979309476,0.213233981900981,7.37999737537595,0.129177819672012,0.31037357147929,0,2.73682780596109,9.09527350311987,0.653150243690884,2.73786640868225,0,0.215166616178029,0.99798106963804,0.244209805832924,0,0,0,0,0.488965776731466,3.25516942652591,0,0.201273793591026,0 | |||
|short_description=p1@FREM2 | |||
}} |
Latest revision as of 07:24, 17 September 2015
Short description: | p1@FREM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FREM2_5end |
Coexpression cluster: | C101_small_cerebellum_maxillary_colon_parietal_epididymis_merkel |
Association with transcript: | 33bp_to_NM_207361, uc001uwv.2_5end |
EntrezGene: | FREM2 |
HGNC: | 25396 |
UniProt: | Q5SZK8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.78e-12 | 5 |
intestinal epithelial cell | 1.35e-09 | 4 |
epithelial cell of large intestine | 4.53e-09 | 2 |
neuronal stem cell | 5.90e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
rectum | 1.20e-09 | 4 |
intestinal mucosa | 1.35e-09 | 4 |
wall of intestine | 1.35e-09 | 4 |
gastrointestinal system mucosa | 1.35e-09 | 4 |
gastrointestinal system epithelium | 1.35e-09 | 4 |
intestinal epithelium | 1.35e-09 | 4 |
lower digestive tract | 8.54e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 7.71e-10 | 4 |
breast cancer | 7.71e-10 | 4 |
cervical cancer | 2.70e-07 | 5 |
gastrointestinal system cancer | 8.41e-07 | 14 |