FFCP PHASE1:Hg19::chr13:39261175..39261197,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=341640 | |EntrezGene=341640 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25396 | |HGNC=25396 | ||
|TSSclassifier=strong | |||
|UniProt=Q5SZK8 | |UniProt=Q5SZK8 | ||
|association_with_transcript=2bp_to_NM_207361,uc001uwv.2_5end | |association_with_transcript=2bp_to_NM_207361,uc001uwv.2_5end | ||
|cluster_id=chr13:39261175..39261197,+ | |||
|description=CAGE_peak_2_at_FREM2_5end | |description=CAGE_peak_2_at_FREM2_5end | ||
|id=chr13:39261175..39261197,+ | |id=chr13:39261175..39261197,+ | ||
|ontology_enrichment_celltype=CL:0002322;1.83e-15;5!CL:0002563;4.22e-08;4!CL:0002253;4.87e-08;2 | |ontology_enrichment_celltype=CL:0002322!1.82e-07!5 | ||
| | |ontology_enrichment_celltype_v019=CL:0002322;1.83e-15;5!CL:0002563;4.22e-08;4!CL:0002253;4.87e-08;2 | ||
|ontology_enrichment_disease=DOID:5093;4.76e-08;4!DOID:1612;4.76e-08;4!DOID:3119;5.94e-08;14 | |ontology_enrichment_celltype_v019_2=CL:0002322,1.06e-15,5;CL:0002563,3.89e-08,4;CL:0002253,4.88e-08,2;CL:0000047,9.63e-07,8 | ||
|ontology_enrichment_uberon=UBERON:0000922;2.39e-10;49!UBERON:0001052;2.56e-08;4!UBERON:0001242;4.22e-08;4!UBERON:0001262;4.22e-08;4!UBERON:0004786;4.22e-08;4!UBERON:0004808;4.22e-08;4!UBERON:0001277;4.22e-08;4!UBERON:0000341;1.44e-07;2!UBERON:0005090;5.75e-07;2!UBERON:0001630;5.75e-07;2 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;4.76e-08;4!DOID:1612;4.76e-08;4!DOID:3119;5.94e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,3.89e-08,4;DOID:1612,3.89e-08,4;DOID:3119,5.17e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.06e-19!115;UBERON:0001017!8.35e-18!82;UBERON:0005743!2.53e-17!86;UBERON:0001049!5.13e-17!57;UBERON:0005068!5.13e-17!57;UBERON:0006241!5.13e-17!57;UBERON:0007135!5.13e-17!57;UBERON:0000073!2.78e-15!94;UBERON:0001016!2.78e-15!94;UBERON:0000955!4.88e-14!69;UBERON:0006238!4.88e-14!69;UBERON:0002616!5.22e-14!59;UBERON:0002346!5.39e-14!90;UBERON:0002780!1.97e-13!41;UBERON:0001890!1.97e-13!41;UBERON:0006240!1.97e-13!41;UBERON:0003080!6.28e-13!42;UBERON:0003075!1.08e-12!86;UBERON:0007284!1.08e-12!86;UBERON:0001893!3.65e-12!34;UBERON:0002791!2.06e-11!33;UBERON:0000956!5.74e-11!25;UBERON:0000203!5.74e-11!25;UBERON:0001869!7.80e-11!32;UBERON:0000153!2.46e-10!129;UBERON:0007811!2.46e-10!129;UBERON:0003056!3.42e-10!61;UBERON:0002020!7.96e-10!34;UBERON:0003528!7.96e-10!34;UBERON:0000924!9.50e-10!173;UBERON:0006601!9.50e-10!173;UBERON:0000033!6.25e-09!123;UBERON:0004121!8.51e-09!169;UBERON:0002619!1.07e-08!22;UBERON:0001950!1.98e-08!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;2.39e-10;49!UBERON:0001052;2.56e-08;4!UBERON:0001242;4.22e-08;4!UBERON:0001262;4.22e-08;4!UBERON:0004786;4.22e-08;4!UBERON:0004808;4.22e-08;4!UBERON:0001277;4.22e-08;4!UBERON:0000341;1.44e-07;2!UBERON:0005090;5.75e-07;2!UBERON:0001630;5.75e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,2.45e-08,4;UBERON:0001242,3.89e-08,4;UBERON:0001262,3.89e-08,4;UBERON:0004786,3.89e-08,4;UBERON:0004808,3.89e-08,4;UBERON:0001277,3.89e-08,4;UBERON:0000341,1.56e-07,2;UBERON:0005090,2.79e-07,2;UBERON:0001630,2.79e-07,2;UBERON:0004907,9.82e-07,5 | |||
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| ||
|short_description=p2@FREM2 | |short_description=p2@FREM2 | ||
}} | }} |
Latest revision as of 07:23, 17 September 2015
Short description: | p2@FREM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FREM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_NM_207361, uc001uwv.2_5end |
EntrezGene: | FREM2 |
HGNC: | 25396 |
UniProt: | Q5SZK8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.06e-15 | 5 |
intestinal epithelial cell | 3.89e-08 | 4 |
epithelial cell of large intestine | 4.88e-08 | 2 |
neuronal stem cell | 9.63e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
rectum | 2.45e-08 | 4 |
intestinal mucosa | 3.89e-08 | 4 |
wall of intestine | 3.89e-08 | 4 |
gastrointestinal system mucosa | 3.89e-08 | 4 |
gastrointestinal system epithelium | 3.89e-08 | 4 |
intestinal epithelium | 3.89e-08 | 4 |
throat | 1.56e-07 | 2 |
muscle structure | 2.79e-07 | 2 |
muscle organ | 2.79e-07 | 2 |
lower digestive tract | 9.82e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 3.89e-08 | 4 |
breast cancer | 3.89e-08 | 4 |
gastrointestinal system cancer | 5.17e-08 | 14 |