FFCP PHASE1:Hg19::chr16:617335..617351,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283948 | |EntrezGene=283948 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=26700 | |HGNC=26700 | ||
|TSSclassifier=strong | |||
|UniProt=P0CG21 | |UniProt=P0CG21 | ||
|association_with_transcript=-178bp_to_BC113527,BC113529_5end | |association_with_transcript=-178bp_to_BC113527,BC113529_5end | ||
|cluster_id=chr16:617335..617351,+ | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_2_at_NHLRC4_5end | |description=CAGE_peak_2_at_NHLRC4_5end | ||
|id=chr16:617335..617351,+ | |id=chr16:617335..617351,+ | ||
|ontology_enrichment_celltype=CL:0002274!1.91e-36!5;CL:0000457!1.91e-36!5;CL:0002191!1.91e-36!5;CL:0000097!1.91e-36!5;CL:0000831!1.91e-36!5;CL:0002028!1.91e-36!5;CL:0000764!1.59e-23!2;CL:0000765!1.59e-23!2;CL:0000050!1.59e-23!2;CL:0000038!1.59e-23!2;CL:0000558!1.59e-23!2;CL:0000547!1.59e-23!2;CL:0000549!1.59e-23!2;CL:0000550!1.59e-23!2;CL:0000552!1.59e-23!2;CL:0000163!2.05e-20!9;CL:0000080!6.42e-17!6;CL:0000784!6.74e-16!3;CL:0000988!2.14e-13!182;CL:0000037!1.20e-10!172;CL:0000566!1.20e-10!172;CL:0000451!1.23e-09!10;CL:0000763!7.37e-07!112;CL:0000049!7.37e-07!112 | |ontology_enrichment_celltype=CL:0002274!1.91e-36!5;CL:0000457!1.91e-36!5;CL:0002191!1.91e-36!5;CL:0000097!1.91e-36!5;CL:0000831!1.91e-36!5;CL:0002028!1.91e-36!5;CL:0000764!1.59e-23!2;CL:0000765!1.59e-23!2;CL:0000050!1.59e-23!2;CL:0000038!1.59e-23!2;CL:0000558!1.59e-23!2;CL:0000547!1.59e-23!2;CL:0000549!1.59e-23!2;CL:0000550!1.59e-23!2;CL:0000552!1.59e-23!2;CL:0000163!2.05e-20!9;CL:0000080!6.42e-17!6;CL:0000784!6.74e-16!3;CL:0000988!2.14e-13!182;CL:0000037!1.20e-10!172;CL:0000566!1.20e-10!172;CL:0000451!1.23e-09!10;CL:0000763!7.37e-07!112;CL:0000049!7.37e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.56e-71;5!CL:0000163;2.91e-40;9!CL:0000764;6.30e-21;2!CL:0000558;6.30e-21;2!CL:0000784;1.96e-14;3!CL:0000151;8.15e-11;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.56e-71,5;CL:0002028,1.56e-71,5;CL:0000163,2.91e-40,9;CL:0000764,5.70e-21,2;CL:0000765,5.70e-21,2;CL:0000050,5.70e-21,2;CL:0000038,5.70e-21,2;CL:0000558,5.70e-21,2;CL:0000547,5.70e-21,2;CL:0000549,5.70e-21,2;CL:0000550,5.70e-21,2;CL:0000552,5.70e-21,2;CL:0000784,2.09e-14,3;CL:0000151,9.21e-11,36;CL:0000839,3.69e-10,66 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8552!3.45e-12!1 | |ontology_enrichment_disease=DOID:8552!3.45e-12!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!6.28e-12!15;UBERON:0000179!6.28e-12!15;UBERON:0000463!6.28e-12!15;UBERON:0002390!1.38e-07!102;UBERON:0003061!1.38e-07!102;UBERON:0002193!8.19e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p2@NHLRC4 | |short_description=p2@NHLRC4 | ||
}} | }} |
Latest revision as of 07:10, 17 September 2015
Short description: | p2@NHLRC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NHLRC4_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -178bp_to_BC113527, BC113529_5end |
EntrezGene: | NHLRC4 |
HGNC: | 26700 |
UniProt: | P0CG21 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.56e-71 | 5 |
basophil mast progenitor cell | 1.56e-71 | 5 |
endocrine cell | 2.91e-40 | 9 |
erythroid lineage cell | 5.70e-21 | 2 |
erythroblast | 5.70e-21 | 2 |
megakaryocyte-erythroid progenitor cell | 5.70e-21 | 2 |
erythroid progenitor cell | 5.70e-21 | 2 |
reticulocyte | 5.70e-21 | 2 |
proerythroblast | 5.70e-21 | 2 |
basophilic erythroblast | 5.70e-21 | 2 |
polychromatophilic erythroblast | 5.70e-21 | 2 |
orthochromatic erythroblast | 5.70e-21 | 2 |
plasmacytoid dendritic cell | 2.09e-14 | 3 |
secretory cell | 9.21e-11 | 36 |
myeloid lineage restricted progenitor cell | 3.69e-10 | 66 |