FFCP PHASE1:Hg19::chr10:14050463..14050515,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:14050463..14050515,- to FFCP PHASE1:Hg19::chr10:14050463..14050515,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55691 | |EntrezGene=55691 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25491 | |HGNC=25491 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T378 | |UniProt=Q5T378 | ||
|association_with_transcript=16bp_to_ENST00000342409_5end | |||
|cluster_id=chr10:14050463..14050515,- | |||
|coexpression_cluster_id=C2994 | |||
|description=CAGE_peak_4_at_FRMD4A_5end | |||
|id=chr10:14050463..14050515,- | |||
|ontology_enrichment_celltype=CL:0000222!4.47e-16!119;CL:0002139!2.57e-13!24;CL:0000359!1.32e-12!32;CL:0000183!9.12e-12!59;CL:0000187!1.41e-11!54;CL:0000055!2.01e-11!180;CL:0000192!6.38e-11!42;CL:0000514!6.38e-11!42;CL:0000680!1.98e-10!57;CL:0000056!1.98e-10!57;CL:0000355!1.98e-10!57;CL:0000393!1.24e-09!60;CL:0000211!1.24e-09!60;CL:0000071!3.13e-09!18;CL:0002546!3.13e-09!18;CL:0000115!3.62e-09!35;CL:0002078!7.57e-08!44;CL:0002539!6.76e-07!10;CL:0000213!6.99e-07!57;CL:0000215!6.99e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;8.32e-19;24!CL:0000359;1.60e-14;32!CL:0000115;3.36e-13;36!CL:0000071;6.75e-13;18!CL:0002078;1.67e-10;45!CL:0000192;4.08e-08;43!CL:0002539;4.33e-08;10!CL:1000413;7.48e-08;9!CL:0002138;1.11e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.35e-19,24;CL:0000222,7.36e-17,121;CL:0000115,7.08e-16,36;CL:0000359,2.52e-15,32;CL:0002078,3.57e-14,45;CL:0000071,4.07e-13,18;CL:0002546,4.07e-13,18;CL:0000213,4.16e-10,58;CL:0000215,4.16e-10,58;CL:0000192,4.42e-10,43;CL:0000514,4.42e-10,43;CL:0000187,3.98e-08,55;CL:0002539,4.96e-08,10;CL:1000413,5.16e-08,9;CL:0005020,9.72e-08,6;CL:0002138,9.72e-08,6;CL:0005022,9.72e-08,6;CL:0000680,2.88e-07,58;CL:0000056,2.88e-07,58;CL:0000355,2.88e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;6.75e-13;18!CL:0000514;4.08e-08;43!CL:0005022;1.11e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;4.33e-08;14!DOID:201;1.00e-06;6!DOID:0060100;1.00e-06;6 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.58e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000055!7.17e-27!69;UBERON:0002049!2.40e-24!79;UBERON:0007798!2.40e-24!79;UBERON:0001981!4.22e-24!60;UBERON:0007500!4.22e-24!60;UBERON:0004537!4.22e-24!60;UBERON:0006965!4.22e-24!60;UBERON:0004872!2.39e-22!84;UBERON:0001637!4.02e-20!42;UBERON:0003509!4.02e-20!42;UBERON:0004572!4.02e-20!42;UBERON:0001009!1.57e-19!113;UBERON:0004535!3.62e-19!110;UBERON:0004573!8.23e-18!33;UBERON:0004571!8.23e-18!33;UBERON:0000477!1.12e-16!286;UBERON:0004111!3.38e-16!241;UBERON:0000025!2.02e-15!194;UBERON:0003914!3.32e-14!118;UBERON:0000119!5.65e-12!312;UBERON:0000947!6.10e-12!21;UBERON:0010191!6.10e-12!21;UBERON:0001134!7.57e-12!61;UBERON:0002036!7.57e-12!61;UBERON:0003082!7.57e-12!61;UBERON:0002385!9.31e-12!63;UBERON:0001015!9.31e-12!63;UBERON:0000383!9.31e-12!63;UBERON:0000490!1.20e-11!138;UBERON:0000483!1.78e-11!309;UBERON:0004290!1.27e-10!70;UBERON:0000914!4.91e-10!83;UBERON:0002329!4.91e-10!83;UBERON:0003077!4.91e-10!83;UBERON:0003059!4.91e-10!83;UBERON:0007282!4.91e-10!83;UBERON:0009618!4.91e-10!83;UBERON:0007285!4.91e-10!83;UBERON:0001986!3.13e-09!18;UBERON:0004638!3.13e-09!18;UBERON:0004852!3.13e-09!18;UBERON:0000486!4.51e-09!82;UBERON:0000467!9.27e-09!625;UBERON:0000475!1.10e-08!365;UBERON:0000480!1.32e-08!626;UBERON:0006914!1.57e-08!25;UBERON:0000468!1.71e-08!659;UBERON:0000487!1.25e-07!22;UBERON:0004237!6.76e-07!10;UBERON:0004695!6.76e-07!10;UBERON:0002111!6.76e-07!10;UBERON:0004178!6.76e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.56e-21;33!UBERON:0004571;2.56e-21;33!UBERON:0001637;7.36e-20;42!UBERON:0003509;7.36e-20;42!UBERON:0004572;7.36e-20;42!UBERON:0000055;1.26e-17;65!UBERON:0007500;2.42e-15;56!UBERON:0001981;2.42e-15;56!UBERON:0004537;2.42e-15;56!UBERON:0000947;1.93e-14;21!UBERON:0010191;1.93e-14;21!UBERON:0004638;6.75e-13;18!UBERON:0001986;6.75e-13;18!UBERON:0004852;6.75e-13;18!UBERON:0002049;5.11e-12;75!UBERON:0007798;5.11e-12;75!UBERON:0006914;2.79e-11;25!UBERON:0000487;1.24e-10;22!UBERON:0003914;4.45e-10;74!UBERON:0004237;4.33e-08;10!UBERON:0004695;4.33e-08;10!UBERON:0002111;4.33e-08;10!UBERON:0004178;4.33e-08;10!UBERON:0003915;7.48e-08;9!UBERON:0004700;7.48e-08;9!UBERON:0001917;7.48e-08;9!UBERON:0004535;2.57e-07;109 | |||
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| ||
|short_description=p4@FRMD4A | |||
}} | }} |
Latest revision as of 07:05, 17 September 2015
Short description: | p4@FRMD4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FRMD4A_5end |
Coexpression cluster: | C2994_osteosarcoma_Fibroblast_mesodermal_Wilms_fibrous_Lymphatic_neuroectodermal |
Association with transcript: | 16bp_to_ENST00000342409_5end |
EntrezGene: | FRMD4A |
HGNC: | 25491 |
UniProt: | Q5T378 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.35e-19 | 24 |
mesodermal cell | 7.36e-17 | 121 |
endothelial cell | 7.08e-16 | 36 |
vascular associated smooth muscle cell | 2.52e-15 | 32 |
meso-epithelial cell | 3.57e-14 | 45 |
blood vessel endothelial cell | 4.07e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.07e-13 | 18 |
lining cell | 4.16e-10 | 58 |
barrier cell | 4.16e-10 | 58 |
smooth muscle cell | 4.42e-10 | 43 |
smooth muscle myoblast | 4.42e-10 | 43 |
muscle cell | 3.98e-08 | 55 |
aortic smooth muscle cell | 4.96e-08 | 10 |
endothelial cell of artery | 5.16e-08 | 9 |
lymphangioblast | 9.72e-08 | 6 |
endothelial cell of lymphatic vessel | 9.72e-08 | 6 |
vascular lymphangioblast | 9.72e-08 | 6 |
muscle precursor cell | 2.88e-07 | 58 |
myoblast | 2.88e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.88e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.58e-08 | 14 |