FFCP PHASE1:Hg19::chr1:27286905..27286966,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=126695 | |EntrezGene=126695 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26624 | |HGNC=26624 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NAX2 | |UniProt=Q8NAX2 | ||
|association_with_transcript=-4bp_to_NM_152365_5end | |association_with_transcript=-4bp_to_NM_152365_5end | ||
|cluster_id=chr1:27286905..27286966,- | |||
|coexpression_cluster_id=C543 | |||
|description=CAGE_peak_1_at_C1orf172_5end | |description=CAGE_peak_1_at_C1orf172_5end | ||
|id=chr1:27286905..27286966,- | |id=chr1:27286905..27286966,- | ||
|ontology_enrichment_celltype=CL:0000066!6.19e-22!254;CL:0002076!2.83e-16!43;CL:0000223!4.74e-16!59;CL:0002159!5.63e-09!13;CL:0002251!1.09e-08!21;CL:0002368!1.39e-08!13 | |ontology_enrichment_celltype=CL:0000066!6.19e-22!254;CL:0002076!2.83e-16!43;CL:0000223!4.74e-16!59;CL:0002159!5.63e-09!13;CL:0002251!1.09e-08!21;CL:0002368!1.39e-08!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.00e-14;42!CL:0002368;9.63e-11;13!CL:0002159;3.64e-10;14!CL:0002251;4.11e-10;20!CL:0002202;5.64e-08;9!CL:0002632;5.64e-08;9!CL:1000507;1.52e-07;10!CL:1000494;1.52e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.11e-27,253;CL:0000223,1.26e-19,58;CL:0002076,1.62e-19,42;CL:0002368,9.32e-11,13;CL:0002159,3.78e-10,14;CL:0002251,4.74e-10,20;CL:0002202,6.00e-08,9;CL:0002632,6.00e-08,9;CL:1000507,2.64e-07,10;CL:1000494,2.64e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000223;8.93e-11;58 | |||
|ontology_enrichment_disease=DOID:305!2.16e-15!106;DOID:0050687!1.17e-09!143;DOID:1749!2.29e-09!14;DOID:299!4.85e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.20e-10;14!DOID:299;2.56e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.00e-15,106;DOID:1749,2.67e-10,14;DOID:0050687,6.81e-10,143;DOID:299,3.02e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.26e-20!169;UBERON:0000925!4.26e-20!169;UBERON:0006595!4.26e-20!169;UBERON:0001007!1.68e-14!155;UBERON:0001555!1.68e-14!155;UBERON:0007026!1.68e-14!155;UBERON:0004921!5.15e-14!129;UBERON:0004185!5.15e-14!129;UBERON:0000466!8.81e-13!126;UBERON:0000077!1.35e-12!130;UBERON:0000464!2.37e-12!104;UBERON:0005911!3.77e-10!82;UBERON:0001004!4.44e-10!72;UBERON:0005178!8.84e-10!34;UBERON:0002224!8.84e-10!34;UBERON:0005177!3.22e-09!107;UBERON:0005181!3.29e-09!35;UBERON:0000064!1.01e-08!219;UBERON:0001041!1.59e-08!98;UBERON:0009569!3.29e-08!113;UBERON:0001008!3.99e-08!45;UBERON:0005153!5.97e-08!37;UBERON:0006554!1.06e-07!44;UBERON:0007196!1.21e-07!14;UBERON:0001558!1.21e-07!14;UBERON:0000065!1.29e-07!53;UBERON:0005631!2.11e-07!14;UBERON:0000158!2.11e-07!14;UBERON:0007023!5.36e-07!115;UBERON:0005157!6.70e-07!51 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;5.50e-09;30!UBERON:0001008;5.50e-09;30!UBERON:0004921;7.26e-09;33!UBERON:0005178;1.43e-08;34!UBERON:0002224;1.43e-08;34!UBERON:0005181;4.79e-08;35!UBERON:0007196;1.21e-07;15!UBERON:0001558;1.21e-07;15!UBERON:0004211;1.52e-07;10!UBERON:0009773;1.52e-07;10!UBERON:0001231;1.52e-07;10!UBERON:0004810;1.52e-07;10!UBERON:0005911;1.72e-07;36!UBERON:0004807;8.63e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.27e-23,160;UBERON:0000925,3.27e-23,160;UBERON:0006595,3.27e-23,160;UBERON:0001007,6.65e-17,145;UBERON:0001555,6.65e-17,145;UBERON:0007026,6.65e-17,145;UBERON:0004921,2.79e-15,118;UBERON:0001008,1.70e-14,48;UBERON:0006554,6.91e-14,47;UBERON:0005177,1.79e-12,101;UBERON:0005911,1.56e-11,82;UBERON:0009569,7.61e-10,112;UBERON:0005178,1.46e-09,34;UBERON:0002224,1.46e-09,34;UBERON:0005631,2.01e-09,14;UBERON:0000158,2.01e-09,14;UBERON:0001004,2.58e-09,74;UBERON:0005181,4.40e-09,35;UBERON:0001041,5.02e-09,87;UBERON:0005153,1.19e-08,37;UBERON:0000161,3.12e-08,36;UBERON:0007196,9.89e-08,15;UBERON:0001558,9.89e-08,15;UBERON:0005157,1.41e-07,47;UBERON:0000915,2.51e-07,52;UBERON:0004810,2.64e-07,10;UBERON:0003124,2.99e-07,7 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,5.16041266653169,26.5164443829522,8.95609625733706,8.96807725976742,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,16.5495820406207,16.5663255328038,4.43704812200145,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,1.63841583378639,0,2.13365111283254,2.40237592221607,1.14950487990897,3.30522436392431,0,2.27685187643779,0.587237189370939,0.764546456250458,0,0,0,2.55722701147983,3.14408610199332,1.64481199199607,0.167186495390678,2.93330039970231,3.31413464014313,0,0,0.589211814949674,0,0.270803863765016,0.384273959177026,0,0,0,0,2.07601188426885,0.802622484269139,1.04535523804977,0.113309342697566,0.383220493601921,2.74901956386104,0.759059076058509,0.95569624297229,1.95325036156926,1.90090408889675,2.55977702432214,2.04778577847069,3.74792179657038,1.65744076430812,0.821127996921047,0.201606743224732,0.534880391567015,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0,1.89919659471683,7.65020105414339,7.41568885568859,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0301631992783,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0.161872944368132,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.69673839234836,7.63689137654337,6.30970109855808,2.92736894711029,3.18071443971565,2.20768491452085,3.10983165046111,1.51392510525377,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,2.53510069643662,1.96565443335525,1.77236972004421,0,2.45976877086227,0,8.01177083482967,5.62008766288098,5.83068039987459,3.42577247086559,0.325808305310325,1.03993478527958,0,0,0,0,0,0,11.0628615714299,7.72637545885385,0,0,0,4.68669169933885,5.03946384596579,7.51408015384648,5.73174545298229,7.55648240136301,14.1851591291128,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,1.18218456121156,1.07813787429759,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.862856803274467,0.533637789017222,14.5501234294205,8.32177197552485,9.97887967987945,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,3.74664293734029,10.6268429260741,8.47145098210246,0,0,0,5.86559496779635,2.46449078734127,3.13739907670742,4.38417673959782,1.47772280450026,0,0,0,0,1.08378575017541,2.00675909541941,4.58777291481069,9.14183609821597,3.35812132083267,0,0,0,0.328014645699706,0,2.7821073144885,0,0,10.9110452219273,11.0510241826209,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0,4.95854746082934,6.3422722230485,1.53135254993501,6.17062463218855,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0.511795582622668,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,2.43816869544795,0,0,0,0,0,0,0,0,1.73632660280006,1.9676842561399,0,0,0,0.573645408816206,0,0,0,0,0,1.13841952129715,0.349934720244983,5.67710465080521,16.0872546128589,11.9780083347455,2.63602642174982,11.193139689452,13.47771805341,11.0857538384169,4.82419140434615,1.01489521846434,0.764637207142375,0,1.19115887728894,0.822724546172388,1.29694662238543,1.08006287447623,0.79312517629427,0,0,6.37104561550682,0.743212700502875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18138918693974,0,0,0,0,5.72986763370456,3.8605408508243,6.45037474408387,0,0.281338832821026,0,0,0.844501632511974,0.597743964753209,2.48655523978033,3.27512572210559,0,0,0,8.44762500784872,2.86433879480975,0,1.28236427328014,0,0,0,0.834912883456661,0,2.86470537193757,4.72283999979457,2.17499872630438,2.84483620713749,6.61059490761192,3.54581522651905,1.03423011972439,0,0,0,0,0,0.663475559587348,0.295547618953547,1.09692698576986,0,4.74040730547251,0.461701551022782,0,6.68635322725374,3.32103284316157,3.15077378573823,3.50901275705111,2.38153742844842,5.86338253620498,0,0,0.332423363800313,3.38393490925771,4.11731322067253,1.1747511088309,0.948768663620925,0,5.06395354867265,2.93819054686466,2.26164914294305,3.02944095638928,5.97157158647103,4.0690479671536,3.66618086960175,0,0,0,0.134802265961354,0,0,0.547364367646998,4.89161547330224,0,3.55125962564451,6.04953580243319,0.30607276163049,0,6.76455387365216,2.48851659353393,0,0,0,0,0.569219092059585,0,2.08271686002157,5.97753624227704,6.18120366720858,4.71762004253481,0,0,0,0,3.87956065953678,0,1.58186518546373,0,0,0.443175571691151,8.21315807486173,1.92381168603681,1.49417096317547,0.999048047910651,4.17862209746907,0,0.343189995723929,0.14405479798815,0,9.66345541928861,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,2.39614800598789,0.429226048136571,0,0,0,4.65983798109815,2.04836273998782,1.89556474276683,2.56133466645903,0,0,0,0.408610218334727,2.57205037544031,2.75078873194468,1.24632101408756,0,0.77380195455795,0,7.37956312718385,3.54625682846392,2.98991152369489,0,0,9.40384466865282,0,0,0,0,0,0,0,0,0,0,1.46552233678082,0,0.258565912723101,0,0,3.52407511158336,1.49502377594773,0.314408610199332,2.89967338743037,3.47316215268366,0,3.77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| 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| ||
|short_description=p1@C1orf172 | |short_description=p1@C1orf172 | ||
}} | }} |
Latest revision as of 07:03, 17 September 2015
Short description: | p1@C1orf172 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C1orf172_5end |
Coexpression cluster: | C543_Alveolar_Corneal_Urothelial_amniotic_Esophageal_Tracheal_esophagus |
Association with transcript: | -4bp_to_NM_152365_5end |
EntrezGene: | C1orf172 |
HGNC: | 26624 |
UniProt: | Q8NAX2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.11e-27 | 253 |
endodermal cell | 1.26e-19 | 58 |
endo-epithelial cell | 1.62e-19 | 42 |
respiratory epithelial cell | 9.32e-11 | 13 |
general ecto-epithelial cell | 3.78e-10 | 14 |
epithelial cell of alimentary canal | 4.74e-10 | 20 |
epithelial cell of tracheobronchial tree | 6.00e-08 | 9 |
epithelial cell of lower respiratory tract | 6.00e-08 | 9 |
kidney tubule cell | 2.64e-07 | 10 |
nephron tubule epithelial cell | 2.64e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.27e-23 | 160 |
endoderm | 3.27e-23 | 160 |
presumptive endoderm | 3.27e-23 | 160 |
digestive system | 6.65e-17 | 145 |
digestive tract | 6.65e-17 | 145 |
primitive gut | 6.65e-17 | 145 |
subdivision of digestive tract | 2.79e-15 | 118 |
renal system | 1.70e-14 | 48 |
urinary system structure | 6.91e-14 | 47 |
trunk region element | 1.79e-12 | 101 |
endo-epithelium | 1.56e-11 | 82 |
subdivision of trunk | 7.61e-10 | 112 |
thoracic cavity element | 1.46e-09 | 34 |
thoracic cavity | 1.46e-09 | 34 |
extraembryonic membrane | 2.01e-09 | 14 |
membranous layer | 2.01e-09 | 14 |
respiratory system | 2.58e-09 | 74 |
thoracic segment organ | 4.40e-09 | 35 |
foregut | 5.02e-09 | 87 |
epithelial bud | 1.19e-08 | 37 |
orifice | 3.12e-08 | 36 |
tracheobronchial tree | 9.89e-08 | 15 |
lower respiratory tract | 9.89e-08 | 15 |
epithelial fold | 1.41e-07 | 47 |
thoracic segment of trunk | 2.51e-07 | 52 |
nephron tubule epithelium | 2.64e-07 | 10 |
chorion | 2.99e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.00e-15 | 106 |
squamous cell carcinoma | 2.67e-10 | 14 |
cell type cancer | 6.81e-10 | 143 |
adenocarcinoma | 3.02e-07 | 25 |