FFCP PHASE1:Hg19::chr10:14013880..14013901,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55691 | |EntrezGene=55691 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25491 | |HGNC=25491 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T376 | |UniProt=Q5T376 | ||
|association_with_transcript=467bp_to_ENST00000264546,uc001imt.1_5end | |association_with_transcript=467bp_to_ENST00000264546,uc001imt.1_5end | ||
|cluster_id=chr10:14013880..14013901,- | |||
|description=CAGE_peak_11_at_FRMD4A_5end | |description=CAGE_peak_11_at_FRMD4A_5end | ||
|id=chr10:14013880..14013901,- | |id=chr10:14013880..14013901,- | ||
|ontology_enrichment_celltype=CL:0000222;6.65e-14;1!CL:0002594;1.95e-13;4!CL:0000054;1.99e-07;2!CL:0000137;1.99e-07;2!CL:0000092;1.99e-07;2 | |ontology_enrichment_celltype=CL:0002586!8.93e-07!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0000222;6.65e-14;1!CL:0002594;1.95e-13;4!CL:0000054;1.99e-07;2!CL:0000137;1.99e-07;2!CL:0000092;1.99e-07;2 | ||
|ontology_enrichment_disease=DOID:5662;1.42e-13;1!DOID:3571;1.42e-13;1!DOID:200;1.99e-07;2!DOID:3350;1.99e-07;2!DOID:4305;1.99e-07;2 | |ontology_enrichment_celltype_v019_2=CL:0002594,2.35e-13,4;CL:0000062,6.31e-11,11;CL:0000375,6.31e-11,11;CL:0000335,6.31e-11,11;CL:0000054,2.12e-07,2;CL:0000137,2.12e-07,2;CL:0000092,2.12e-07,2 | ||
|ontology_enrichment_uberon=UBERON:0002363;1.42e-13;1!UBERON:0002426;1.42e-13;1!UBERON:0003831;1.42e-13;1!UBERON:0003898;1.42e-13;1!UBERON:0004830;1.42e-13;1!UBERON:0003830;1.42e-13;1!UBERON:0005175;1.42e-13;1!UBERON:0001774;1.42e-13;1!UBERON:0001103;1.42e-13;1!UBERON:0001310;1.95e-13;4!UBERON:0002360;1.99e-07;2!UBERON:0005090;1.99e-07;2!UBERON:0001630;1.99e-07;2!UBERON:0000094;1.99e-07;2!UBERON:0010743;1.99e-07;2!UBERON:0001474;6.94e-07;18 | |ontology_enrichment_development_v019=UBERON:0000358;6.65e-14;1!UBERON:0010115;1.42e-13;1!CL:0000335;6.10e-11;11 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;1.42e-13;1!DOID:3571;1.42e-13;1!DOID:200;1.99e-07;2!DOID:3350;1.99e-07;2!DOID:4305;1.99e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,9.73e-14,1;DOID:3571,1.83e-13,1;DOID:200,2.12e-07,2;DOID:4305,2.12e-07,2;DOID:3350,2.25e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.20e-15!115;UBERON:0000966!4.53e-07!5;UBERON:0005388!4.53e-07!5;UBERON:0001802!4.53e-07!5;UBERON:0006947!5.98e-07!3;UBERON:0004054!5.98e-07!3;UBERON:0001781!8.93e-07!3;UBERON:0001782!8.93e-07!3;UBERON:0005424!8.93e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;1.42e-13;1!UBERON:0002426;1.42e-13;1!UBERON:0003831;1.42e-13;1!UBERON:0003898;1.42e-13;1!UBERON:0004830;1.42e-13;1!UBERON:0003830;1.42e-13;1!UBERON:0005175;1.42e-13;1!UBERON:0001774;1.42e-13;1!UBERON:0001103;1.42e-13;1!UBERON:0001310;1.95e-13;4!UBERON:0002360;1.99e-07;2!UBERON:0005090;1.99e-07;2!UBERON:0001630;1.99e-07;2!UBERON:0000094;1.99e-07;2!UBERON:0010743;1.99e-07;2!UBERON:0001474;6.94e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,1.10e-13,1;UBERON:0003831,1.10e-13,1;UBERON:0003898,1.10e-13,1;UBERON:0004830,1.10e-13,1;UBERON:0003830,1.10e-13,1;UBERON:0005175,1.10e-13,1;UBERON:0001774,1.10e-13,1;UBERON:0001103,1.10e-13,1;UBERON:0010084,1.10e-13,1;UBERON:0002363,1.42e-13,1;UBERON:0007645,1.42e-13,1;UBERON:0007647,1.42e-13,1;UBERON:0010115,1.42e-13,1;UBERON:0001310,2.35e-13,4;UBERON:0005090,1.75e-07,2;UBERON:0001630,1.75e-07,2;UBERON:0002360,1.99e-07,2;UBERON:0000094,1.99e-07,2;UBERON:0010743,1.99e-07,2 | |||
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| ||
|short_description=p11@FRMD4A | |short_description=p11@FRMD4A | ||
}} | }} |
Latest revision as of 06:58, 17 September 2015
Short description: | p11@FRMD4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_FRMD4A_5end |
Coexpression cluster: | NA |
Association with transcript: | 467bp_to_ENST00000264546, uc001imt.1_5end |
EntrezGene: | FRMD4A |
HGNC: | 25491 |
UniProt: | Q5T376 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical artery | 2.35e-13 | 4 |
osteoblast | 6.31e-11 | 11 |
osteoprogenitor cell | 6.31e-11 | 11 |
mesenchyme condensation cell | 6.31e-11 | 11 |
bone matrix secreting cell | 2.12e-07 | 2 |
osteocyte | 2.12e-07 | 2 |
osteoclast | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 1.10e-13 | 1 |
respiratory system muscle | 1.10e-13 | 1 |
skeletal muscle of trunk | 1.10e-13 | 1 |
respiratory system skeletal muscle | 1.10e-13 | 1 |
thoracic segment muscle | 1.10e-13 | 1 |
chest organ | 1.10e-13 | 1 |
muscle of trunk | 1.10e-13 | 1 |
diaphragm | 1.10e-13 | 1 |
future diaphragm | 1.10e-13 | 1 |
dura mater | 1.42e-13 | 1 |
future meninx | 1.42e-13 | 1 |
ectomeninx | 1.42e-13 | 1 |
future dura mater | 1.42e-13 | 1 |
umbilical artery | 2.35e-13 | 4 |
muscle structure | 1.75e-07 | 2 |
muscle organ | 1.75e-07 | 2 |
meninx | 1.99e-07 | 2 |
membrane organ | 1.99e-07 | 2 |
meningeal cluster | 1.99e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 9.73e-14 | 1 |
liver cancer | 1.83e-13 | 1 |
giant cell tumor | 2.12e-07 | 2 |
bone giant cell tumor | 2.12e-07 | 2 |
mesenchymal cell neoplasm | 2.25e-07 | 2 |