FFCP PHASE1:Hg19::chr11:2018467..2018477,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:2018467..2018477,-
|short_description=p19@H19
|description=CAGE_peak_19_at_H19_5end
|association_with_transcript=-20bp_to_ENST00000411861_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4713 | |HGNC=4713 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-20bp_to_ENST00000411861_5end | |||
|cluster_id=chr11:2018467..2018477,- | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_19_at_H19_5end | |||
|id=chr11:2018467..2018477,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.52e-22;19!CL:0002577;1.79e-08;3!CL:0002541;5.51e-08;3!CL:0000515;8.27e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.44e-22,19;CL:0002577,1.79e-08,3;CL:0002541,6.42e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.60e-07;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.42e-13!14;UBERON:0000158!3.42e-13!14;UBERON:0001737!1.15e-11!9;UBERON:0000478!1.32e-11!24;UBERON:0001557!8.69e-11!19;UBERON:0003104!4.75e-10!238;UBERON:0009142!4.75e-10!238;UBERON:0003124!7.25e-10!7;UBERON:0004923!1.93e-09!57;UBERON:0000077!1.93e-08!130;UBERON:0004921!4.18e-08!129;UBERON:0004185!4.18e-08!129;UBERON:0001041!4.53e-08!98;UBERON:0004119!4.84e-08!169;UBERON:0000925!4.84e-08!169;UBERON:0006595!4.84e-08!169;UBERON:0000481!2.28e-07!347;UBERON:0000064!4.26e-07!219;UBERON:0001007!8.84e-07!155;UBERON:0001555!8.84e-07!155;UBERON:0007026!8.84e-07!155;UBERON:0000063!9.62e-07!97 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.31e-22;24!UBERON:0001737;5.90e-20;9!UBERON:0001557;5.90e-20;9!UBERON:0001134;8.22e-17;16!UBERON:0002036;8.22e-17;16!UBERON:0005631;3.72e-15;10!UBERON:0000158;3.72e-15;10!UBERON:0001987;1.74e-10;4!UBERON:0000305;3.43e-09;7!UBERON:0001723;3.88e-08;3!UBERON:0001033;3.88e-08;3!UBERON:0003124;5.51e-08;3!UBERON:0000920;5.51e-08;3!UBERON:0002385;2.62e-07;31!UBERON:0001015;2.62e-07;31!UBERON:0000383;2.62e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.27e-23,14;UBERON:0000158,1.27e-23,14;UBERON:0000478,2.31e-22,24;UBERON:0001737,5.55e-20,9;UBERON:0003124,1.07e-16,7;UBERON:0001557,1.67e-15,19;UBERON:0001987,1.81e-10,4;UBERON:0004340,1.81e-10,4;UBERON:0000305,3.33e-09,7;UBERON:0001723,4.32e-08,3;UBERON:0001033,4.32e-08,3;UBERON:0010056,4.32e-08,3;UBERON:0004871,5.58e-08,8;UBERON:0000920,6.42e-08,3;UBERON:0000072,1.57e-07,47 | |||
|phase1_expression=0.726713517082227,1.07050261945492,0.563817616383885,3.00219895059391,1.34088328328186,6.97870819280295,0,0,0,0.982935746006035,1.39560233594486,17.693751142544,20.3100573235909,0.123766352960047,4.97096063591874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0.795285947051099,3.89307896242109,0.189069634328136,0,0.087834785693126,0.130979075497713,0,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24271040056923,0,0,0,0,0,0.756787138224657,4.60940739583999,0.468642863667593,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0.929551542956147,0.310983165046111,0.252320850875628,0,0,0,0,0,0,4.8505788016336,6.40621822296786,6.50729780685401,6.72793233667603,5.88274499049497,4.98268300133303,6.47190279168789,4.31687223275761,10.7729203944989,0.738155454624648,0,0.8231480226628,8.82052268313252,0,0,2.36315962672562,0,0,0.171567810298526,0,0,0,1.29623823221941,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.285955987316295,83.0211056248908,1.64648067356154,0,0.355391948742546,1.58390374586686,0,0,0,0,0,0,0,0,0,1.30303176000821,3.6985738059069,1.61154866915906,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.981531933753119,0,0.271265023699736,0,0,0,0,1.20378439891088,0,1.03473071292505,0,0.184369168541703,0,17.4263030141839,41.8634977049244,0,0,0,11.2157201435116,39.9445054825193,26.9127361063415,0.496215615637554,0,1.68396056659844,0.640695746278505,0.511707249066704,0.482561763430822,8.90508398669946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27466768141793,0,0.215915916102139,6.16909010761157,0,1.00337954770971,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,1.06337790121334,0,1.84204409671355,1.7918754422989,0.429680979473094,1.16013355131383,0.93749290157711,3.73934549716297,0,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0.949138274156178,0,0,3.85145089230528,0,0,0.359744915166629,0,0,0,0,0,1.46290121726877,0,0,0,0,0,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0.143411352204052,0.589494246078727,0,0,0,0,0.379473173765715,2.0996083214699,0.0962221127255121,0,0,0.941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,37.9603730732927,15.4421634032972,77.7116576311057,0,0,0,0,0.844501632511974,0.19924798825107,0,2.26739473068848,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,1.89110145414349,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,8.79624915215767,5.3237212241784,50.0831820779114,1.28236630762607,114.069442067988,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0.0884575645033392,2.4441205797345,0,0,0,0.067401132980677,15.248975298677,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0.0967563312890851,0,0,0.484945082442097,0.176512253383001,1.80784592624426,0,0,0,0.195551382734803,0,0,39.1626834780975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0.599037001496973,0,0.223171457441873,0.806201669840715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,1.20645552710496,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0.146552233678082,11.9256200020999,0,0,0,0,0,0.78602152549833,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4008607045578,0.343395705182793,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,1.72519698234691,0,1.74735421107222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471878893390961,0.550285795565037,17.0977985902501,0,0,0,0.300841313397029,0,0.781514011233092,9.42864100133121,0,0.591424344868181,0,0,0,0,0,0,1.98484471355718,0,0,0,0,0,0,5.14473746943305,0,0.171488009437418,0,0,0,0,0.235479278551542,0,1.68163297988273,5.47895232305697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06196181689645,0,0,0,0,0,11.0062902321942,1.95059333026869,11.598144313382,2.4285549652957,0,0,0,0,0,0,0,1.74847648403166,0,0.490296643507811,0.235676547101626,0,0,0,0,0.0939839179798536,0.773494655682926,0,0.357107877211315,0,0,0.730336388246517,0.458729283404541,0,0,0,0,2.1161073620616,0.371995018166751,0,7.7872781182282,0,0.218531143927391,0.380095503034311,0.101988829741982,0,0,0,0.227336094654718,0.267964130156178,0,0,1.49263787330687,3.80903090341985,0,0.372448285775147,0,0,0.606351566874658,4.13661821004227,17.1116650542641,0.471464371102113,0.0717222053926763,4.9899053481902,0.0814032686109745,0,0,0,9.38563769613817,0.244482888365733,4.06896178315738,0,0,0 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|phase1_expression=0.726713517082227,1.07050261945492,0.563817616383885,3.00219895059391,1.34088328328186,6.97870819280295,0,0,0,0.982935746006035,1.39560233594486,17.693751142544,20.3100573235909,0.123766352960047,4.97096063591874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0.795285947051099,3.89307896242109,0.189069634328136,0,0.087834785693126,0.130979075497713,0,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24271040056923,0,0,0,0,0,0.756787138224657,4.60940739583999,0.468642863667593,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0.929551542956147,0.310983165046111,0.252320850875628,0,0,0,0,0,0,4.8505788016336,6.40621822296786,6.50729780685401,6.72793233667603,5.88274499049497,4.98268300133303,6.47190279168789,4.31687223275761,10.7729203944989,0.738155454624648,0,0.8231480226628,8.82052268313252,0,0,2.36315962672562,0,0,0.171567810298526,0,0,0,1.29623823221941,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.285955987316295,83.0211056248908,1.64648067356154,0,0.355391948742546,1.58390374586686,0,0,0,0,0,0,0,0,0,1.30303176000821,3.6985738059069,1.61154866915906,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.981531933753119,0,0.271265023699736,0,0,0,0,1.20378439891088,0,1.03473071292505,0,0.184369168541703,0,17.4263030141839,41.8634977049244,0,0,0,11.2157201435116,39.9445054825193,26.9127361063415,0.496215615637554,0,1.68396056659844,0.640695746278505,0.511707249066704,0.482561763430822,8.90508398669946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27466768141793,0,0.215915916102139,6.16909010761157,0,1.00337954770971,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,1.06337790121334,0,1.84204409671355,1.7918754422989,0.429680979473094,1.16013355131383,0.93749290157711,3.73934549716297,0,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0.949138274156178,0,0,3.85145089230528,0,0,0.359744915166629,0,0,0,0,0,1.46290121726877,0,0,0,0,0,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0.143411352204052,0.589494246078727,0,0,0,0,0.379473173765715,2.0996083214699,0.0962221127255121,0,0,0.941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,37.9603730732927,15.4421634032972,77.7116576311057,0,0,0,0,0.844501632511974,0.19924798825107,0,2.26739473068848,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,1.89110145414349,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,8.79624915215767,5.3237212241784,50.0831820779114,1.28236630762607,114.069442067988,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0.0884575645033392,2.4441205797345,0,0,0,0.067401132980677,15.248975298677,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0.0967563312890851,0,0,0.484945082442097,0.176512253383001,1.80784592624426,0,0,0,0.195551382734803,0,0,39.1626834780975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0.599037001496973,0,0.223171457441873,0.806201669840715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,1.20645552710496,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0.146552233678082,11.9256200020999,0,0,0,0,0,0.78602152549833,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4008607045578,0.343395705182793,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,1.72519698234691,0,1.74735421107222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471878893390961,0.550285795565037,17.0977985902501,0,0,0,0.300841313397029,0,0.781514011233092,9.42864100133121,0,0.591424344868181,0,0,0,0,0,0,1.98484471355718,0,0,0,0,0,0,5.14473746943305,0,0.171488009437418,0,0,0,0,0.235479278551542,0,1.68163297988273,5.47895232305697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06196181689645,0,0,0,0,0,11.0062902321942,1.95059333026869,11.598144313382,2.4285549652957,0,0,0,0,0,0,0,1.74847648403166,0,0.490296643507811,0.235676547101626,0,0,0,0,0.0939839179798536,0.773494655682926,0,0.357107877211315,0,0,0.730336388246517,0.458729283404541,0,0,0,0,2.1161073620616,0.371995018166751,0,7.7872781182282,0,0.218531143927391,0.380095503034311,0.101988829741982,0,0,0,0.227336094654718,0.267964130156178,0,0,1.49263787330687,3.80903090341985,0,0.372448285775147,0,0,0.606351566874658,4.13661821004227,17.1116650542641,0.471464371102113,0.0717222053926763,4.9899053481902,0.0814032686109745,0,0,0,9.38563769613817,0.244482888365733,4.06896178315738,0,0,0 | ||
|short_description=p19@H19 | |||
}} | }} |
Latest revision as of 06:52, 17 September 2015
Short description: | p19@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_H19_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | -20bp_to_ENST00000411861_5end |
EntrezGene: | NA |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.44e-22 | 19 |
placental epithelial cell | 1.79e-08 | 3 |
chorionic membrane mesenchymal stem cell | 6.42e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.27e-23 | 14 |
membranous layer | 1.27e-23 | 14 |
extraembryonic structure | 2.31e-22 | 24 |
larynx | 5.55e-20 | 9 |
chorion | 1.07e-16 | 7 |
upper respiratory tract | 1.67e-15 | 19 |
placenta | 1.81e-10 | 4 |
allantois | 1.81e-10 | 4 |
amnion | 3.33e-09 | 7 |
tongue | 4.32e-08 | 3 |
gustatory system | 4.32e-08 | 3 |
future tongue | 4.32e-08 | 3 |
somatic layer of lateral plate mesoderm | 5.58e-08 | 8 |
egg chorion | 6.42e-08 | 3 |
segment of respiratory tract | 1.57e-07 | 47 |