FFCP PHASE1:Hg19::chr11:2018359..2018371,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:2018359..2018371,- to FFCP PHASE1:Hg19::chr11:2018359..2018371,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4713 | |HGNC=4713 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=75bp_to_ENST00000411861_5end | |||
|cluster_id=chr11:2018359..2018371,- | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_11_at_H19_5end | |||
|id=chr11:2018359..2018371,- | |||
|ontology_enrichment_celltype=CL:0000188!8.25e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000349;5.80e-15;19!CL:0000188;8.01e-08;9!CL:0002577;6.09e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,5.98e-15,19;CL:0000188,5.58e-08,9;CL:0002577,6.11e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!5.32e-12!14;UBERON:0000158!5.32e-12!14;UBERON:0004923!3.10e-11!57;UBERON:0001737!8.28e-11!9;UBERON:0001557!1.64e-10!19;UBERON:0003124!3.57e-09!7;UBERON:0000478!6.67e-09!24;UBERON:0003104!1.09e-08!238;UBERON:0009142!1.09e-08!238;UBERON:0004119!1.29e-08!169;UBERON:0000925!1.29e-08!169;UBERON:0006595!1.29e-08!169;UBERON:0004921!1.51e-07!129;UBERON:0004185!1.51e-07!129;UBERON:0000077!1.65e-07!130;UBERON:0000481!2.09e-07!347;UBERON:0000064!3.15e-07!219;UBERON:0001041!4.52e-07!98;UBERON:0001007!4.62e-07!155;UBERON:0001555!4.62e-07!155;UBERON:0007026!4.62e-07!155;UBERON:0004457!5.90e-07!12;UBERON:0000042!5.90e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.34e-17;16!UBERON:0002036;1.34e-17;16!UBERON:0001737;4.95e-16;9!UBERON:0001557;4.95e-16;9!UBERON:0000478;5.95e-15;24!UBERON:0005631;5.84e-12;10!UBERON:0000158;5.84e-12;10!UBERON:0001987;1.93e-08;4!UBERON:0000305;3.04e-07;7!UBERON:0002385;3.22e-07;31!UBERON:0001015;3.22e-07;31!UBERON:0000383;3.22e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.65e-18,14;UBERON:0000158,1.65e-18,14;UBERON:0001737,5.21e-16,9;UBERON:0000478,6.18e-15,24;UBERON:0003124,1.86e-13,7;UBERON:0001557,6.54e-12,19;UBERON:0001987,1.95e-08,4;UBERON:0004340,1.95e-08,4;UBERON:0000305,3.03e-07,7 | |||
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|phase1_expression=2.18014055124668,2.5692062866918,0.422863212287913,1.0007329835313,3.12872766099101,28.7871712953122,0,0,0.261185628199839,0.737201809504527,2.09340350391728,23.5916681900586,29.0143676051299,0.618831764800233,0.331397375727916,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,1.08371286321253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.383587685530591,0,0,0.144846518960824,0,2.43317435151318,0.0945348171640679,0,0.175669571386252,0.196468613246569,0.364295288292542,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0.709336764396714,3.36406560085384,0,0,0,0.134710672069688,0,1.36221684880438,8.06646294271999,1.17160715916898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51052125730374,1.24393266018445,0.252320850875628,0,0,0,0,0,0,13.2503616044625,11.1265895451547,13.2556066435915,13.5661586460845,11.7654899809899,10.4399072408883,16.1797569792197,12.1657308377715,15.3898862778556,0.738155454624648,1.40241773803446,2.4694440679884,11.7606969108434,0,0,2.36315962672562,0,0,0,0,0,0,4.9997760385606,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71573592389777,103.098105024374,0,0,1.77695974371273,2.37585561880029,0,0,0,0,0,0,0,0,0,3.76431397335706,8.6300055471161,3.58121926479791,0,0,0,0,0,0,0,0,0,0,0,0,2.08575535922538,2.50085260529839,0,0,0,0,0,0.902838299183157,0,4.1389228517002,0,0.184369168541703,0,27.8037643597092,55.9323780811695,0,0,0,41.5284772881375,69.9028845944088,63.5019615992329,2.97729369382532,0.153461973288062,2.80660094433074,1.15325234330131,2.04682899626681,2.73451665944133,20.7785293022987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0.340187410553031,0,6.16909010761157,0,1.00337954770971,0,0,0,0,0,0,0.328014645699706,0,1.23649213977267,0,0,0,0,0,3.48014585851639,1.69453478826109,2.6095624703442,1.92971201478343,0.859361958946189,2.61030049045611,2.13066568540252,12.7315810974834,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0.632758849437452,0.762520775695299,0,6.84702380854273,0,0,0.359744915166629,0,0.117812402345686,0,0,0,1.95053495635836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8667317792493,0,0,0.211107635297664,0.329294892959902,0.379473173765715,1.74967360122491,0,0,0,1.31801321087491,0.43050537267123,1.68471475667626,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,89.2904372918961,46.9204195715569,183.067778451142,0,0,0,0,0.211125408127993,0.19924798825107,0.276283915531148,4.53478946137697,0,0,0,0,0,0,1.1837208676432,0,0,0,0,0,0,0,1.44999915086959,0,0,2.36387681767936,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,13.6431619502854,8.47449500991663,97.6143548779674,4.48828207669125,269.715596665429,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0.0884575645033392,6.11030144933625,0,0,0,0,44.9443482487322,0,0,0.391329237864179,0,1.18375320854817,1.20990716048664,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0,0,1.22308667769421,0,0.0967563312890851,0,0,0.581934098930517,0,3.84167259326905,0,0,0,0.195551382734803,0,0.213452994739353,85.5185129011517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0.399358000997982,1.28767814440971,1.33902874465124,2.48578848200887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,1.52118305591495,0,0,0,0.714695326373367,0,0.25426853765475,0,0,0.326587360109409,0,0,0,0,0.439656701034247,43.727273341033,0,0,0,0,0,0.314408610199332,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0.144921028610825,0,0,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0.398095888698616,24.0016658797892,0.343395705182793,0.673498977531838,0,0,0,1.04397716786085,0,0,0,0,0,0,0,0,0,0,0.690860683462397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11038630016486,0,3.23474434190045,0,2.73024095480035,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.196295437002051,1.06172751012966,0.733714394086716,22.7585562316166,0,0,0,0.225630985047772,0.20170506870352,0,17.5477485302553,0,1.6264169483875,0,0,0,0,0,0,3.47347824872506,0,0.127762427639595,0,0,0,0,7.00748724284847,0,0.342976018874837,0,0,0,0,0,0,4.20408244970683,10.0447459256045,0,0,0.214429632529969,0,0,0,0,0,0.3414369541879,0.691259661814092,0,0,0,0,4.582137370881,0,0,0,0,0,5.17943069750316,2.66923297826242,23.196288626764,5.82853191670967,0,0,0,0,0,0,0,2.18559560503957,0,0.735444965261716,0.235676547101626,0,0,3.3812458206672,0.169927114687817,0.0939839179798536,1.4180735354187,0,0,0,0,2.19100916473955,0.917458566809082,0,0.157771562193185,0,0,6.87734892670021,0.371995018166751,0,15.5745562364564,0,0.327796715891087,0.380095503034311,0,0,0,0,0.227336094654718,0.267964130156178,0,0,5.11761556562354,5.47548192366603,0,0.248298857183432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| ||
|short_description=p11@H19 | |||
}} | }} |
Latest revision as of 06:46, 17 September 2015
Short description: | p11@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_H19_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | 75bp_to_ENST00000411861_5end |
EntrezGene: | NA |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 5.98e-15 | 19 |
cell of skeletal muscle | 5.58e-08 | 9 |
placental epithelial cell | 6.11e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.65e-18 | 14 |
membranous layer | 1.65e-18 | 14 |
larynx | 5.21e-16 | 9 |
extraembryonic structure | 6.18e-15 | 24 |
chorion | 1.86e-13 | 7 |
upper respiratory tract | 6.54e-12 | 19 |
placenta | 1.95e-08 | 4 |
allantois | 1.95e-08 | 4 |
amnion | 3.03e-07 | 7 |