FFCP PHASE1:Hg19::chr11:2018359..2018371,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:2018359..2018371,-
|short_description=p11@H19
|description=CAGE_peak_11_at_H19_5end
|association_with_transcript=75bp_to_ENST00000411861_5end
|EntrezGene...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4713 | |HGNC=4713 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=75bp_to_ENST00000411861_5end | |||
|cluster_id=chr11:2018359..2018371,- | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_11_at_H19_5end | |||
|id=chr11:2018359..2018371,- | |||
|ontology_enrichment_celltype=CL:0000188!8.25e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000349;5.80e-15;19!CL:0000188;8.01e-08;9!CL:0002577;6.09e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,5.98e-15,19;CL:0000188,5.58e-08,9;CL:0002577,6.11e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!5.32e-12!14;UBERON:0000158!5.32e-12!14;UBERON:0004923!3.10e-11!57;UBERON:0001737!8.28e-11!9;UBERON:0001557!1.64e-10!19;UBERON:0003124!3.57e-09!7;UBERON:0000478!6.67e-09!24;UBERON:0003104!1.09e-08!238;UBERON:0009142!1.09e-08!238;UBERON:0004119!1.29e-08!169;UBERON:0000925!1.29e-08!169;UBERON:0006595!1.29e-08!169;UBERON:0004921!1.51e-07!129;UBERON:0004185!1.51e-07!129;UBERON:0000077!1.65e-07!130;UBERON:0000481!2.09e-07!347;UBERON:0000064!3.15e-07!219;UBERON:0001041!4.52e-07!98;UBERON:0001007!4.62e-07!155;UBERON:0001555!4.62e-07!155;UBERON:0007026!4.62e-07!155;UBERON:0004457!5.90e-07!12;UBERON:0000042!5.90e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.34e-17;16!UBERON:0002036;1.34e-17;16!UBERON:0001737;4.95e-16;9!UBERON:0001557;4.95e-16;9!UBERON:0000478;5.95e-15;24!UBERON:0005631;5.84e-12;10!UBERON:0000158;5.84e-12;10!UBERON:0001987;1.93e-08;4!UBERON:0000305;3.04e-07;7!UBERON:0002385;3.22e-07;31!UBERON:0001015;3.22e-07;31!UBERON:0000383;3.22e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.65e-18,14;UBERON:0000158,1.65e-18,14;UBERON:0001737,5.21e-16,9;UBERON:0000478,6.18e-15,24;UBERON:0003124,1.86e-13,7;UBERON:0001557,6.54e-12,19;UBERON:0001987,1.95e-08,4;UBERON:0004340,1.95e-08,4;UBERON:0000305,3.03e-07,7 | |||
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| ||
|short_description=p11@H19 | |||
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Latest revision as of 06:46, 17 September 2015
Short description: | p11@H19 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_H19_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | 75bp_to_ENST00000411861_5end |
EntrezGene: | NA |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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extraembryonic cell | 5.98e-15 | 19 |
cell of skeletal muscle | 5.58e-08 | 9 |
placental epithelial cell | 6.11e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.65e-18 | 14 |
membranous layer | 1.65e-18 | 14 |
larynx | 5.21e-16 | 9 |
extraembryonic structure | 6.18e-15 | 24 |
chorion | 1.86e-13 | 7 |
upper respiratory tract | 6.54e-12 | 19 |
placenta | 1.95e-08 | 4 |
allantois | 1.95e-08 | 4 |
amnion | 3.03e-07 | 7 |