FFCP PHASE1:Hg19::chr16:5956015..5956026,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:5956015..5956026,- | |||
|coexpression_cluster_id=C21 | |coexpression_cluster_id=C21 | ||
|description=CAGE_peak_at_chr16:5956015..5956026,- | |description=CAGE_peak_at_chr16:5956015..5956026,- | ||
|id=chr16:5956015..5956026,- | |id=chr16:5956015..5956026,- | ||
|ontology_enrichment_celltype=CL:0000306!4.93e-10!4;CL:0002222!4.93e-10!4;CL:0002224!4.93e-10!4;CL:0000080!1.61e-07!6;CL:0002166!8.21e-07!3 | |ontology_enrichment_celltype=CL:0000306!4.93e-10!4;CL:0002222!4.93e-10!4;CL:0002224!4.93e-10!4;CL:0000080!1.61e-07!6;CL:0002166!8.21e-07!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!6.10e-07!10 | |ontology_enrichment_disease=DOID:0060058!6.10e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:4960;1.56e-19;1!DOID:0070004;1.56e-19;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,1.88e-19,1;DOID:0070004,1.88e-19,1 | |||
|ontology_enrichment_uberon=UBERON:0007625!3.09e-13!11;UBERON:0001801!2.87e-10!14;UBERON:0000488!4.35e-10!4;UBERON:0010077!4.93e-10!4;UBERON:0005389!4.93e-10!4;UBERON:0000484!4.93e-10!4;UBERON:0002546!4.93e-10!4;UBERON:0000965!4.93e-10!4;UBERON:0001803!4.93e-10!4;UBERON:0003073!4.93e-10!4;UBERON:0005426!4.93e-10!4;UBERON:0000033!9.72e-10!123;UBERON:0000153!4.44e-09!129;UBERON:0007811!4.44e-09!129;UBERON:0003056!1.97e-08!61;UBERON:0000019!2.12e-07!19;UBERON:0000047!2.12e-07!19;UBERON:0004088!2.12e-07!19;UBERON:0003072!2.12e-07!19;UBERON:0003071!2.12e-07!19;UBERON:0004128!2.12e-07!19;UBERON:0000970!5.33e-07!20;UBERON:0001444!7.28e-07!48;UBERON:0002203!7.30e-07!6;UBERON:0001768!7.30e-07!6 | |ontology_enrichment_uberon=UBERON:0007625!3.09e-13!11;UBERON:0001801!2.87e-10!14;UBERON:0000488!4.35e-10!4;UBERON:0010077!4.93e-10!4;UBERON:0005389!4.93e-10!4;UBERON:0000484!4.93e-10!4;UBERON:0002546!4.93e-10!4;UBERON:0000965!4.93e-10!4;UBERON:0001803!4.93e-10!4;UBERON:0003073!4.93e-10!4;UBERON:0005426!4.93e-10!4;UBERON:0000033!9.72e-10!123;UBERON:0000153!4.44e-09!129;UBERON:0007811!4.44e-09!129;UBERON:0003056!1.97e-08!61;UBERON:0000019!2.12e-07!19;UBERON:0000047!2.12e-07!19;UBERON:0004088!2.12e-07!19;UBERON:0003072!2.12e-07!19;UBERON:0003071!2.12e-07!19;UBERON:0004128!2.12e-07!19;UBERON:0000970!5.33e-07!20;UBERON:0001444!7.28e-07!48;UBERON:0002203!7.30e-07!6;UBERON:0001768!7.30e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.23e-17;10!UBERON:0000178;1.27e-11;15!UBERON:0000179;1.27e-11;15!UBERON:0000463;1.27e-11;15!UBERON:0002390;2.73e-09;32!UBERON:0000478;1.76e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,4.00e-17,10;UBERON:0000358,4.00e-17,10;UBERON:0000307,4.00e-17,10;UBERON:0000091,4.00e-17,10;UBERON:0000087,4.00e-17,10;UBERON:0007010,4.00e-17,10;UBERON:0007806,4.00e-17,10;UBERON:0008780,4.00e-17,10;UBERON:0005728,4.00e-17,10;UBERON:0000178,1.23e-11,15;UBERON:0000179,1.23e-11,15;UBERON:0000463,1.23e-11,15;UBERON:0000478,1.73e-07,24 | |||
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| ||
|short_description=p@chr16:5956015..5956026,- | |short_description=p@chr16:5956015..5956026,- | ||
}} | }} |
Latest revision as of 06:41, 17 September 2015
Short description: | p@chr16:5956015..5956026, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:5956015..5956026, - |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 4.00e-17 | 10 |
blastocyst | 4.00e-17 | 10 |
blastula | 4.00e-17 | 10 |
bilaminar disc | 4.00e-17 | 10 |
inner cell mass | 4.00e-17 | 10 |
cleaving embryo | 4.00e-17 | 10 |
connecting stalk | 4.00e-17 | 10 |
inner cell mass derived epiblast | 4.00e-17 | 10 |
extraembryonic mesoderm | 4.00e-17 | 10 |
blood | 1.23e-11 | 15 |
haemolymphatic fluid | 1.23e-11 | 15 |
organism substance | 1.23e-11 | 15 |
extraembryonic structure | 1.73e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.88e-19 | 1 |
myeloma | 1.88e-19 | 1 |