FFCP PHASE1:Hg19::chr12:12715789..12715806,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:12715789..12715806,-
|short_description=p1@DUSP16
|description=CAGE_peak_1_at_DUSP16_5end
|association_with_transcript=-341bp_to_NM_030640_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80824 | |EntrezGene=80824 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17909 | |HGNC=17909 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BY84 | |UniProt=Q9BY84 | ||
|association_with_transcript=-341bp_to_NM_030640_5end | |||
|cluster_id=chr12:12715789..12715806,- | |||
|coexpression_cluster_id=C3252 | |||
|description=CAGE_peak_1_at_DUSP16_5end | |||
|id=chr12:12715789..12715806,- | |||
|ontology_enrichment_celltype=CL:0000738!4.16e-11!140;CL:0000791!2.44e-09!18;CL:0000789!2.44e-09!18;CL:0002420!2.44e-09!18;CL:0002419!2.44e-09!18;CL:0000790!2.44e-09!18;CL:0002087!7.60e-08!119;CL:0002031!1.97e-07!124;CL:0000084!2.04e-07!25;CL:0000827!2.04e-07!25;CL:0002057!3.52e-07!42;CL:0000625!7.93e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.46e-09;18!CL:0000789;1.46e-09;18!CL:0002419;1.46e-09;18!CL:0000084;1.37e-07;25!CL:0000625;6.57e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.13e-12,136;CL:0000791,2.27e-09,18;CL:0000789,2.27e-09,18;CL:0002420,2.27e-09,18;CL:0002419,2.27e-09,18;CL:0000790,2.27e-09,18;CL:0002087,9.78e-09,115;CL:0002031,2.70e-08,120;CL:0000084,1.54e-07,25;CL:0000827,1.54e-07,25;CL:0000860,3.69e-07,42;CL:0002057,3.69e-07,42;CL:0000625,7.55e-07,11;CL:0000766,7.77e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000790;1.46e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.26e-17!115;UBERON:0004921!9.57e-08!129;UBERON:0004185!9.57e-08!129;UBERON:0001041!2.79e-07!98;UBERON:0000077!8.20e-07!130;UBERON:0002193!8.29e-07!112;UBERON:0002390!8.94e-07!102;UBERON:0003061!8.94e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.47e-17,114;UBERON:0011216,9.14e-10,223;UBERON:0004921,1.32e-08,118;UBERON:0001041,2.24e-08,87;UBERON:0002390,1.47e-07,98;UBERON:0003061,1.47e-07,98;UBERON:0002193,1.77e-07,108 | |||
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| ||
|short_description=p1@DUSP16 | |||
}} | }} |
Latest revision as of 06:19, 17 September 2015
Short description: | p1@DUSP16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DUSP16_5end |
Coexpression cluster: | C3252_CD14_hepatoblastoma_pineal_CD4_pituitary_thymus_rectal |
Association with transcript: | -341bp_to_NM_030640_5end |
EntrezGene: | DUSP16 |
HGNC: | 17909 |
UniProt: | Q9BY84 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.13e-12 | 136 |
mature alpha-beta T cell | 2.27e-09 | 18 |
alpha-beta T cell | 2.27e-09 | 18 |
immature T cell | 2.27e-09 | 18 |
mature T cell | 2.27e-09 | 18 |
immature alpha-beta T cell | 2.27e-09 | 18 |
nongranular leukocyte | 9.78e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 2.70e-08 | 120 |
T cell | 1.54e-07 | 25 |
pro-T cell | 1.54e-07 | 25 |
classical monocyte | 3.69e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.69e-07 | 42 |
CD8-positive, alpha-beta T cell | 7.55e-07 | 11 |
myeloid leukocyte | 7.77e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.47e-17 | 114 |
organ system subdivision | 9.14e-10 | 223 |
subdivision of digestive tract | 1.32e-08 | 118 |
foregut | 2.24e-08 | 87 |
hematopoietic system | 1.47e-07 | 98 |
blood island | 1.47e-07 | 98 |
hemolymphoid system | 1.77e-07 | 108 |