FFCP PHASE1:Hg19::chr1:153579885..153579920,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:153579885..153579920,- to FFCP PHASE1:Hg19::chr1:153579885..153579920,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=140576 | |EntrezGene=140576 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=20441 | |HGNC=20441 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-202bp_to_U23859_5end | |||
|cluster_id=chr1:153579885..153579920,- | |||
|description=CAGE_peak_10_at_S100A16_5end | |||
|id=chr1:153579885..153579920,- | |||
|ontology_enrichment_celltype=CL:0000220!2.93e-23!246;CL:0002321!1.63e-22!248;CL:0000222!8.00e-22!119;CL:0000066!7.61e-16!254;CL:0000183!8.22e-11!59;CL:0000680!1.82e-10!57;CL:0000056!1.82e-10!57;CL:0000355!1.82e-10!57;CL:0000213!2.60e-10!57;CL:0000215!2.60e-10!57;CL:0000055!3.57e-10!180;CL:0002078!4.61e-10!44;CL:0000192!5.73e-10!42;CL:0000514!5.73e-10!42;CL:0000187!1.35e-09!54;CL:0000115!2.65e-09!35;CL:0002139!3.92e-09!24;CL:0000359!8.73e-09!32;CL:0000548!9.50e-08!679;CL:0000004!9.50e-08!679;CL:0000255!9.50e-08!679;CL:0000076!1.12e-07!62;CL:0000393!1.32e-07!60;CL:0000211!1.32e-07!60;CL:0000012!2.93e-07!682;CL:0000071!4.68e-07!18;CL:0002546!4.68e-07!18;CL:0000057!6.40e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.60e-11;32!CL:0002139;6.49e-09;24!CL:0000115;7.13e-09;36!CL:0002078;8.22e-08;45!CL:1000449;9.62e-08;15!CL:0000192;1.87e-07;43!CL:0000071;3.01e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.77e-19,121;CL:0002321,2.08e-16,250;CL:0000359,6.64e-12,32;CL:0000115,1.32e-10,36;CL:0002078,1.58e-10,45;CL:0000192,2.48e-10,43;CL:0000514,2.48e-10,43;CL:0002139,2.74e-09,24;CL:0000680,3.48e-09,58;CL:0000056,3.48e-09,58;CL:0000355,3.48e-09,58;CL:0000213,6.30e-09,58;CL:0000215,6.30e-09,58;CL:0000066,7.57e-09,253;CL:0000187,1.35e-08,55;CL:1000449,1.78e-07,15;CL:0000071,1.83e-07,18;CL:0002546,1.83e-07,18;CL:0000393,5.63e-07,61;CL:0000211,5.63e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;1.87e-07;43!CL:0002546;3.01e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!1.68e-19!216;UBERON:0005256!1.60e-18!143;UBERON:0003914!2.96e-18!118;UBERON:0000055!4.49e-18!69;UBERON:0002049!6.76e-18!79;UBERON:0007798!6.76e-18!79;UBERON:0004872!2.30e-16!84;UBERON:0003104!3.16e-16!238;UBERON:0009142!3.16e-16!238;UBERON:0000486!4.00e-16!82;UBERON:0001981!5.05e-16!60;UBERON:0007500!5.05e-16!60;UBERON:0004537!5.05e-16!60;UBERON:0006965!5.05e-16!60;UBERON:0000483!1.30e-15!309;UBERON:0000119!2.94e-15!312;UBERON:0000914!3.66e-14!83;UBERON:0002329!3.66e-14!83;UBERON:0003077!3.66e-14!83;UBERON:0003059!3.66e-14!83;UBERON:0007282!3.66e-14!83;UBERON:0009618!3.66e-14!83;UBERON:0007285!3.66e-14!83;UBERON:0000490!5.07e-14!138;UBERON:0000475!7.76e-14!365;UBERON:0001637!2.68e-13!42;UBERON:0003509!2.68e-13!42;UBERON:0004572!2.68e-13!42;UBERON:0004290!6.51e-13!70;UBERON:0000481!4.89e-12!347;UBERON:0000468!8.52e-12!659;UBERON:0004535!2.02e-11!110;UBERON:0004111!5.59e-11!241;UBERON:0001009!7.50e-11!113;UBERON:0002385!7.51e-11!63;UBERON:0001015!7.51e-11!63;UBERON:0000383!7.51e-11!63;UBERON:0000477!7.53e-11!286;UBERON:0001134!1.51e-10!61;UBERON:0002036!1.51e-10!61;UBERON:0003082!1.51e-10!61;UBERON:0000467!2.21e-10!625;UBERON:0004573!2.98e-10!33;UBERON:0004571!2.98e-10!33;UBERON:0000480!3.38e-10!626;UBERON:0009569!5.33e-09!113;UBERON:0000926!1.20e-08!448;UBERON:0004120!1.20e-08!448;UBERON:0006603!1.20e-08!448;UBERON:0000915!7.33e-08!52;UBERON:0003102!3.10e-07!95;UBERON:0000025!3.31e-07!194;UBERON:0001986!4.68e-07!18;UBERON:0004638!4.68e-07!18;UBERON:0004852!4.68e-07!18;UBERON:0002050!7.02e-07!605;UBERON:0005423!7.02e-07!605;UBERON:0000923!8.03e-07!604;UBERON:0005291!8.03e-07!604;UBERON:0006598!8.03e-07!604;UBERON:0002532!8.03e-07!604;UBERON:0003103!9.36e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.79e-14;33!UBERON:0004571;4.79e-14;33!UBERON:0001637;1.08e-12;42!UBERON:0003509;1.08e-12;42!UBERON:0004572;1.08e-12;42!UBERON:0007500;8.93e-12;56!UBERON:0001981;8.93e-12;56!UBERON:0004537;8.93e-12;56!UBERON:0003914;3.26e-10;74!UBERON:0000055;2.11e-09;65!UBERON:0006555;9.62e-08;15!UBERON:0004819;9.62e-08;15!UBERON:0001285;9.62e-08;15!UBERON:0007684;9.62e-08;15!UBERON:0000353;2.92e-07;15!UBERON:0004638;3.01e-07;18!UBERON:0001986;3.01e-07;18!UBERON:0004852;3.01e-07;18!UBERON:0003513;6.06e-07;7!UBERON:0000947;7.30e-07;21!UBERON:0010191;7.30e-07;21!UBERON:0002049;9.66e-07;75!UBERON:0007798;9.66e-07;75 | |||
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| ||
|short_description=p10@S100A16 | |||
}} | }} |
Latest revision as of 06:14, 17 September 2015
Short description: | p10@S100A16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_S100A16_5end |
Coexpression cluster: | NA |
Association with transcript: | -202bp_to_U23859_5end |
EntrezGene: | S100A16 |
HGNC: | 20441 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.77e-19 | 121 |
embryonic cell | 2.08e-16 | 250 |
vascular associated smooth muscle cell | 6.64e-12 | 32 |
endothelial cell | 1.32e-10 | 36 |
meso-epithelial cell | 1.58e-10 | 45 |
smooth muscle cell | 2.48e-10 | 43 |
smooth muscle myoblast | 2.48e-10 | 43 |
endothelial cell of vascular tree | 2.74e-09 | 24 |
muscle precursor cell | 3.48e-09 | 58 |
myoblast | 3.48e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.48e-09 | 58 |
lining cell | 6.30e-09 | 58 |
barrier cell | 6.30e-09 | 58 |
epithelial cell | 7.57e-09 | 253 |
muscle cell | 1.35e-08 | 55 |
epithelial cell of nephron | 1.78e-07 | 15 |
blood vessel endothelial cell | 1.83e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.83e-07 | 18 |
electrically responsive cell | 5.63e-07 | 61 |
electrically active cell | 5.63e-07 | 61 |