FFCP PHASE1:Hg19::chr13:37006624..37006638,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8900 | |EntrezGene=8900 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1577 | |HGNC=1577 | ||
|TSSclassifier=strong | |||
|UniProt=P78396 | |UniProt=P78396 | ||
|association_with_transcript=129bp_to_ENST00000255465_5end | |association_with_transcript=129bp_to_ENST00000255465_5end | ||
|cluster_id=chr13:37006624..37006638,+ | |||
|description=CAGE_peak_1_at_CCNA1_5end | |description=CAGE_peak_1_at_CCNA1_5end | ||
|id=chr13:37006624..37006638,+ | |id=chr13:37006624..37006638,+ | ||
|ontology_enrichment_celltype=CL:0000076!1.39e-14!62;CL:0002139!2.26e-10!24;CL:0000213!2.20e-09!57;CL:0000215!2.20e-09!57;CL:0000071!2.91e-09!18;CL:0002546!2.91e-09!18;CL:0002321!3.15e-08!248;CL:1000413!5.25e-08!9;CL:0000220!6.05e-08!246;CL:0000066!8.67e-08!254;CL:0000222!1.28e-07!119;CL:0000077!5.50e-07!19 | |ontology_enrichment_celltype=CL:0000076!1.39e-14!62;CL:0002139!2.26e-10!24;CL:0000213!2.20e-09!57;CL:0000215!2.20e-09!57;CL:0000071!2.91e-09!18;CL:0002546!2.91e-09!18;CL:0002321!3.15e-08!248;CL:1000413!5.25e-08!9;CL:0000220!6.05e-08!246;CL:0000066!8.67e-08!254;CL:0000222!1.28e-07!119;CL:0000077!5.50e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0000071;1.17e-11;18!CL:1000413;4.82e-11;9!CL:0002139;8.29e-11;24!CL:0000076;8.58e-09;63!CL:0002544;9.88e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000076,4.64e-16,63;CL:0000071,1.16e-11,18;CL:0002546,1.16e-11,18;CL:1000413,4.89e-11,9;CL:0002139,8.62e-11,24;CL:0000213,4.93e-10,58;CL:0000215,4.93e-10,58;CL:0000066,5.73e-09,253;CL:0002544,9.93e-08,6;CL:0000222,3.83e-07,121;CL:0000763,8.67e-07,108;CL:0000049,8.67e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002546;1.17e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:193;9.70e-09;29!DOID:120;4.81e-08;27 | |||
|ontology_enrichment_disease_v019_2=DOID:193,9.09e-09,29;DOID:120,4.74e-08,27 | |||
|ontology_enrichment_uberon=UBERON:0001986!2.91e-09!18;UBERON:0004638!2.91e-09!18;UBERON:0004852!2.91e-09!18;UBERON:0003915!5.25e-08!9;UBERON:0004700!5.25e-08!9;UBERON:0001917!5.25e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.17e-11;18!UBERON:0001986;1.17e-11;18!UBERON:0004852;1.17e-11;18!UBERON:0003915;4.82e-11;9!UBERON:0004700;4.82e-11;9!UBERON:0001917;4.82e-11;9!UBERON:0000487;1.40e-08;22!UBERON:0000490;6.15e-08;33!UBERON:0006914;5.78e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.16e-11,18;UBERON:0001986,1.16e-11,18;UBERON:0004852,1.16e-11,18;UBERON:0003915,4.89e-11,9;UBERON:0004700,4.89e-11,9;UBERON:0001917,4.89e-11,9;UBERON:0000487,1.39e-08,22;UBERON:0000055,1.97e-07,68;UBERON:0007500,2.80e-07,59;UBERON:0001981,2.80e-07,59;UBERON:0004537,2.80e-07,59;UBERON:0006965,2.80e-07,59;UBERON:0001637,5.37e-07,42;UBERON:0003509,5.37e-07,42;UBERON:0004572,5.37e-07,42;UBERON:0006914,5.74e-07,25;UBERON:0002049,9.44e-07,78;UBERON:0007798,9.44e-07,78 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,1.34465029290355,0,0,0,0.123121058076788,0.408001382488506,0,1.71741592278634,3.14811177667634,0.87879847716362,3.36218985290986,4.92603536699674,3.30585281517453,14.9478425202584,0.383829398097213,0.309632246632152,1.83884244895785,0.6024118375565,29.2105668031762,0,0,0,0,0,0,0,0,0.257575567634187,0,0.377875943688809,0,0.929716147622738,0.411167888021826,0.309706370895104,3.16461631554365,2.81776777182011,1.18241114944293,3.10271112662957,1.93645405075148,0,0.752969358170419,0,0.224723484445085,1.53041946185451,0.962787081228281,0,1.64925650093358,0.997318288108159,0.426224750532694,2.03146467040009,1.13477044938228,0,5.02497330513487,1.0429658368404,1.52032191293582,3.63239701580021,1.10483290796269,0.949387162322653,0,0,0,0,0,0.32145117339416,0,0,0,0,0,0,0.853460445133014,0.400395987036012,0,0,0,0,0,0.382273228125229,0,2.80254281490768,1.31692042387539,0,0,0,0,0.32592226663359,0,0,0.557052284425868,0,0,0,0.128091319725675,0.130059347559878,0,0,0.289803085735052,0,0,0,0.339928028092699,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.639312809217652,0,0,0,0,0,1.98523116044542,1.99556457716308,0.87834785693126,0.327447688744282,0.728590576585084,0.370784442784429,8.43823223502177,9.75126528875897,17.1515769069336,0,0,0,76.7222892435482,49.0333719210491,71.858083832772,21.4817017931124,42.3694430572005,58.3250248912943,97.3916544061537,0.516833518338658,2.13459757612026,0.66944122552934,4.43112248820062,8.36299316290364,1.70843440283719,5.51494620518803,34.0259618110339,0.803697554556718,0.22452937262617,0,21.4643292452237,6.6448596169769,4.03043836646896,0,0,4.36094052142534,0,0,0.264818361626438,0.286836620748814,0.709336764396714,17.3810056044115,2.1349799145941,1.2333377420858,2.48968828319813,42.9727043902305,9.15386657435369,0.151357427644931,0,0,0,11.409436430889,0,0.23486899728753,0.161872944368132,0,0,0.122834317311768,0.206651562351531,0,0,0.910161361938026,2.15585442544872,2.35670559535693,0.375355559615893,0,0,0,0,56.3757950305305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0.966304265816484,0.545492241181669,0.860413786167011,1.21973706129595,0.927708378250397,2.32387885739037,1.34759371519982,2.01856680700503,1.82488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88724591328378,2.08525542276389,4.49607013030478,0,0.185176890317059,0.325808305310325,0,14.4331342025273,3.59384255422738,0.70445216541493,7.50705528357584,0.925971025153221,1.52203321787679,0.790204397959275,0.858486162094873,0.738651018262192,9.59417487070874,4.60756603095058,0.93733833986777,0,0.992425680696705,50.0632141908922,27.6102241588264,10.7347150166259,7.38994856843915,3.43388892651582,1.65862492432618,0.864719720501769,1.76739406796932,0.126995788584338,0,0,0,0,4.50514586765876,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,2.41151501647669,0.871533458600294,4.29883862082845,1.2162378064119,0,2.10833939483032,0,0,0,0.434343920002738,0,0.179060963239896,0,0,0,0,0.508189248444927,0,0.773288812777695,0.335032530668698,3.18969375826582,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0.315404830067869,0.117141414992713,0,0,0,0,0,0,0,0,0.620304078368662,0,0.320182673410333,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,2.07701771673448,0,0.120859449591622,2.20557117333613,22.191518333551,12.0555170572837,0.910455840033585,0.524497659837696,0,0.308061348417659,0,0,0.316654886678627,0,11.3962782535265,0.215915916102139,0,0.270946437543853,0,0,0,0,5.92001666944023,7.05875717767231,29.4917643883848,1.96808787419823,0,0.412164046590889,0,0,0,1.30012049207304,0,2.41676795730305,0.924291702687866,0.767518373630648,0.964856007391714,0,0.580066775656914,2.04543905798642,2.58192903375538,33.0569830721956,2.49847087574638,0.255225424989168,15.9829293751769,0,0,0,25.2587535744393,12.2430386972915,0,0,4.8662461492277,0,0,0.38126038784765,0,0,0,1.56989728039846,0,0,0.117812402345686,9.90694159709249,45.9679931401724,8.8464275810186,0,3.41198885483798,0,0.272999822815972,0.565621727814851,4.52032466480971,0,0,0.438450885253763,0.578775534266688,0,3.44947640836597,0.92947049429925,0.563391205064483,3.44187245289724,0.0982490410131212,4.280052617775,7.80474340955315,0,0,0,0.349934720244983,9.81465549800223,2.01090682660736,8.71127878890581,0.188287601553558,1.29151611801369,0,6.65145230305014,3.90529780351831,0,2.29391162142713,0,0.952927101831156,0.411362273086194,0,0.540031437238115,0,0.213648142254946,0,12.4970510150326,0,0,0,0,1.1974762285969,9.95827924688307,1.05836791361941,0,73.2880634876127,1.36940807419915,0.783399478865116,0,0,49.7823032821469,17.9601739400032,8.0910785161162,0,11.6751490437214,15.6573275524691,12.847383911817,5.47086667125713,0,0,0,9.65908707193678,0,0,0.439524537815682,0,1.5602073798847,0,0,0.296964680832639,0.307160702099232,0,0.422008249231538,0.445234820091624,17.9636222907168,11.6118974470396,0,0.276283915531148,2.26739473068848,0.102268682502155,0,0,0,0,5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|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,1.34465029290355,0,0,0,0.123121058076788,0.408001382488506,0,1.71741592278634,3.14811177667634,0.87879847716362,3.36218985290986,4.92603536699674,3.30585281517453,14.9478425202584,0.383829398097213,0.309632246632152,1.83884244895785,0.6024118375565,29.2105668031762,0,0,0,0,0,0,0,0,0.257575567634187,0,0.377875943688809,0,0.929716147622738,0.411167888021826,0.309706370895104,3.16461631554365,2.81776777182011,1.18241114944293,3.10271112662957,1.93645405075148,0,0.752969358170419,0,0.224723484445085,1.53041946185451,0.962787081228281,0,1.64925650093358,0.997318288108159,0.426224750532694,2.03146467040009,1.13477044938228,0,5.02497330513487,1.0429658368404,1.52032191293582,3.63239701580021,1.10483290796269,0.949387162322653,0,0,0,0,0,0.32145117339416,0,0,0,0,0,0,0.853460445133014,0.400395987036012,0,0,0,0,0,0.382273228125229,0,2.80254281490768,1.31692042387539,0,0,0,0,0.32592226663359,0,0,0.557052284425868,0,0,0,0.128091319725675,0.130059347559878,0,0,0.289803085735052,0,0,0,0.339928028092699,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.639312809217652,0,0,0,0,0,1.98523116044542,1.99556457716308,0.87834785693126,0.327447688744282,0.728590576585084,0.370784442784429,8.43823223502177,9.75126528875897,17.1515769069336,0,0,0,76.7222892435482,49.0333719210491,71.858083832772,21.4817017931124,42.3694430572005,58.3250248912943,97.3916544061537,0.516833518338658,2.13459757612026,0.66944122552934,4.43112248820062,8.36299316290364,1.70843440283719,5.51494620518803,34.0259618110339,0.803697554556718,0.22452937262617,0,21.4643292452237,6.6448596169769,4.03043836646896,0,0,4.36094052142534,0,0,0.264818361626438,0.286836620748814,0.709336764396714,17.3810056044115,2.1349799145941,1.2333377420858,2.48968828319813,42.9727043902305,9.15386657435369,0.151357427644931,0,0,0,11.409436430889,0,0.23486899728753,0.161872944368132,0,0,0.122834317311768,0.206651562351531,0,0,0.910161361938026,2.15585442544872,2.35670559535693,0.375355559615893,0,0,0,0,56.3757950305305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0.966304265816484,0.545492241181669,0.860413786167011,1.21973706129595,0.927708378250397,2.32387885739037,1.34759371519982,2.01856680700503,1.82488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88724591328378,2.08525542276389,4.49607013030478,0,0.185176890317059,0.325808305310325,0,14.4331342025273,3.59384255422738,0.70445216541493,7.50705528357584,0.925971025153221,1.52203321787679,0.790204397959275,0.858486162094873,0.738651018262192,9.59417487070874,4.60756603095058,0.93733833986777,0,0.992425680696705,50.0632141908922,27.6102241588264,10.7347150166259,7.38994856843915,3.43388892651582,1.65862492432618,0.864719720501769,1.76739406796932,0.126995788584338,0,0,0,0,4.50514586765876,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,2.41151501647669,0.871533458600294,4.29883862082845,1.2162378064119,0,2.10833939483032,0,0,0,0.434343920002738,0,0.179060963239896,0,0,0,0,0.508189248444927,0,0.773288812777695,0.335032530668698,3.18969375826582,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0.315404830067869,0.117141414992713,0,0,0,0,0,0,0,0,0.620304078368662,0,0.320182673410333,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,2.07701771673448,0,0.120859449591622,2.20557117333613,22.191518333551,12.0555170572837,0.910455840033585,0.524497659837696,0,0.308061348417659,0,0,0.316654886678627,0,11.3962782535265,0.215915916102139,0,0.270946437543853,0,0,0,0,5.92001666944023,7.05875717767231,29.4917643883848,1.96808787419823,0,0.412164046590889,0,0,0,1.30012049207304,0,2.41676795730305,0.924291702687866,0.767518373630648,0.964856007391714,0,0.580066775656914,2.04543905798642,2.58192903375538,33.0569830721956,2.49847087574638,0.255225424989168,15.9829293751769,0,0,0,25.2587535744393,12.2430386972915,0,0,4.8662461492277,0,0,0.38126038784765,0,0,0,1.56989728039846,0,0,0.117812402345686,9.90694159709249,45.9679931401724,8.8464275810186,0,3.41198885483798,0,0.272999822815972,0.565621727814851,4.52032466480971,0,0,0.438450885253763,0.578775534266688,0,3.44947640836597,0.92947049429925,0.563391205064483,3.44187245289724,0.0982490410131212,4.280052617775,7.80474340955315,0,0,0,0.349934720244983,9.81465549800223,2.01090682660736,8.71127878890581,0.188287601553558,1.29151611801369,0,6.65145230305014,3.90529780351831,0,2.29391162142713,0,0.952927101831156,0.411362273086194,0,0.540031437238115,0,0.213648142254946,0,12.4970510150326,0,0,0,0,1.1974762285969,9.95827924688307,1.05836791361941,0,73.2880634876127,1.36940807419915,0.783399478865116,0,0,49.7823032821469,17.9601739400032,8.0910785161162,0,11.6751490437214,15.6573275524691,12.847383911817,5.47086667125713,0,0,0,9.65908707193678,0,0,0.439524537815682,0,1.5602073798847,0,0,0.296964680832639,0.307160702099232,0,0.422008249231538,0.445234820091624,17.9636222907168,11.6118974470396,0,0.276283915531148,2.26739473068848,0.102268682502155,0,0,0,0,5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| ||
|short_description=p1@CCNA1 | |short_description=p1@CCNA1 | ||
}} | }} |
Latest revision as of 06:04, 17 September 2015
Short description: | p1@CCNA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCNA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 129bp_to_ENST00000255465_5end |
EntrezGene: | CCNA1 |
HGNC: | 1577 |
UniProt: | P78396 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous epithelial cell | 4.64e-16 | 63 |
blood vessel endothelial cell | 1.16e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.16e-11 | 18 |
endothelial cell of artery | 4.89e-11 | 9 |
endothelial cell of vascular tree | 8.62e-11 | 24 |
lining cell | 4.93e-10 | 58 |
barrier cell | 4.93e-10 | 58 |
epithelial cell | 5.73e-09 | 253 |
aortic endothelial cell | 9.93e-08 | 6 |
mesodermal cell | 3.83e-07 | 121 |
myeloid cell | 8.67e-07 | 108 |
common myeloid progenitor | 8.67e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.16e-11 | 18 |
endothelium | 1.16e-11 | 18 |
cardiovascular system endothelium | 1.16e-11 | 18 |
endothelial tube | 4.89e-11 | 9 |
arterial system endothelium | 4.89e-11 | 9 |
endothelium of artery | 4.89e-11 | 9 |
simple squamous epithelium | 1.39e-08 | 22 |
vessel | 1.97e-07 | 68 |
epithelial tube open at both ends | 2.80e-07 | 59 |
blood vessel | 2.80e-07 | 59 |
blood vasculature | 2.80e-07 | 59 |
vascular cord | 2.80e-07 | 59 |
artery | 5.37e-07 | 42 |
arterial blood vessel | 5.37e-07 | 42 |
arterial system | 5.37e-07 | 42 |
squamous epithelium | 5.74e-07 | 25 |
vasculature | 9.44e-07 | 78 |
vascular system | 9.44e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
reproductive organ cancer | 9.09e-09 | 29 |
female reproductive organ cancer | 4.74e-08 | 27 |