FFCP PHASE1:Hg19::chr3:186648307..186648375,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:186648307..186648375,+
|short_description=p1@ST6GAL1
|description=CAGE_peak_1_at_ST6GAL1_5end
|association_with_transcript=0bp_to_ENST00000427315,ENST00000...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6480 | |EntrezGene=6480 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10860 | |HGNC=10860 | ||
|TSSclassifier=strong | |||
|UniProt=C9JVK7,C9JAT4,B2R513,P15907 | |UniProt=C9JVK7,C9JAT4,B2R513,P15907 | ||
|association_with_transcript=0bp_to_ENST00000427315,ENST00000455441,ENST00000457772,ENST00000487031,NM_173216,NM_173217_5end | |||
|cluster_id=chr3:186648307..186648375,+ | |||
|description=CAGE_peak_1_at_ST6GAL1_5end | |||
|id=chr3:186648307..186648375,+ | |||
|ontology_enrichment_celltype=CL:0000988!3.65e-15!182;CL:0000037!1.24e-14!172;CL:0000566!1.24e-14!172;CL:0000542!1.68e-14!53;CL:0000051!1.68e-14!53;CL:0000838!5.11e-14!52;CL:0002032!1.23e-13!165;CL:0000837!1.23e-13!165;CL:0000115!1.39e-13!35;CL:0002087!2.71e-12!119;CL:0000738!3.27e-12!140;CL:0002139!1.67e-11!24;CL:0002031!4.93e-11!124;CL:0002078!1.85e-10!44;CL:0000236!2.64e-09!14;CL:0000945!8.01e-09!24;CL:0000826!8.01e-09!24;CL:0000071!1.13e-08!18;CL:0002546!1.13e-08!18;CL:0000791!4.25e-08!18;CL:0000789!4.25e-08!18;CL:0002420!4.25e-08!18;CL:0002419!4.25e-08!18;CL:0000790!4.25e-08!18;CL:0000625!3.92e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000115;3.84e-12;36!CL:0002139;1.46e-11;24!CL:0000236;2.76e-09;13!CL:0000542;3.19e-09;53!CL:0000945;7.51e-09;24!CL:0000071;1.03e-08;18!CL:0000791;3.91e-08;18!CL:0000789;3.91e-08;18!CL:0002419;3.91e-08;18!CL:0002078;3.60e-07;45!CL:0000625;3.66e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,9.59e-17,177;CL:0000037,1.54e-16,168;CL:0002032,1.68e-15,161;CL:0000837,1.68e-15,161;CL:0000542,1.27e-14,53;CL:0000051,1.27e-14,53;CL:0002087,2.48e-14,115;CL:0000838,3.88e-14,52;CL:0000738,4.59e-14,136;CL:0000115,5.42e-14,36;CL:0002031,6.86e-13,120;CL:0002139,1.53e-11,24;CL:0002078,9.43e-11,45;CL:0000236,2.46e-09,14;CL:0000945,7.50e-09,24;CL:0000826,7.50e-09,24;CL:0000071,1.06e-08,18;CL:0002546,1.06e-08,18;CL:0000791,4.00e-08,18;CL:0000789,4.00e-08,18;CL:0002420,4.00e-08,18;CL:0002419,4.00e-08,18;CL:0000790,4.00e-08,18;CL:0000625,3.72e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;3.19e-09;53!CL:0002546;1.03e-08;18!CL:0000790;3.91e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.41e-21!115;UBERON:0001986!1.13e-08!18;UBERON:0004638!1.13e-08!18;UBERON:0004852!1.13e-08!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.03e-08;18!UBERON:0001986;1.03e-08;18!UBERON:0004852;1.03e-08;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.02e-20,114;UBERON:0004638,1.06e-08,18;UBERON:0001986,1.06e-08,18;UBERON:0004852,1.06e-08,18;UBERON:0002193,5.88e-08,108 | |||
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| ||
|short_description=p1@ST6GAL1 | |||
}} | }} |
Latest revision as of 05:55, 17 September 2015
Short description: | p1@ST6GAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ST6GAL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000427315, ENST00000455441, ENST00000457772, ENST00000487031, NM_173216, NM_173217_5end |
EntrezGene: | ST6GAL1 |
HGNC: | 10860 |
UniProt: | C9JVK7C9JAT4B2R513P15907 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 9.59e-17 | 177 |
hematopoietic stem cell | 1.54e-16 | 168 |
hematopoietic oligopotent progenitor cell | 1.68e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.68e-15 | 161 |
lymphocyte | 1.27e-14 | 53 |
common lymphoid progenitor | 1.27e-14 | 53 |
nongranular leukocyte | 2.48e-14 | 115 |
lymphoid lineage restricted progenitor cell | 3.88e-14 | 52 |
leukocyte | 4.59e-14 | 136 |
endothelial cell | 5.42e-14 | 36 |
hematopoietic lineage restricted progenitor cell | 6.86e-13 | 120 |
endothelial cell of vascular tree | 1.53e-11 | 24 |
meso-epithelial cell | 9.43e-11 | 45 |
B cell | 2.46e-09 | 14 |
lymphocyte of B lineage | 7.50e-09 | 24 |
pro-B cell | 7.50e-09 | 24 |
blood vessel endothelial cell | 1.06e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.06e-08 | 18 |
mature alpha-beta T cell | 4.00e-08 | 18 |
alpha-beta T cell | 4.00e-08 | 18 |
immature T cell | 4.00e-08 | 18 |
mature T cell | 4.00e-08 | 18 |
immature alpha-beta T cell | 4.00e-08 | 18 |
CD8-positive, alpha-beta T cell | 3.72e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.02e-20 | 114 |
blood vessel endothelium | 1.06e-08 | 18 |
endothelium | 1.06e-08 | 18 |
cardiovascular system endothelium | 1.06e-08 | 18 |
hemolymphoid system | 5.88e-08 | 108 |