FFCP PHASE1:Hg19::chr16:58426296..58426302,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:58426296..58426302,+
|short_description=p3@GINS3
|description=CAGE_peak_3_at_GINS3_5end
|association_with_transcript=0bp_to_ENST00000328514,ENST0000042653...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64785 | |EntrezGene=64785 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25851 | |HGNC=25851 | ||
|TSSclassifier=strong | |||
|UniProt=E9PB21,Q9BRX5 | |UniProt=E9PB21,Q9BRX5 | ||
|association_with_transcript=0bp_to_ENST00000328514,ENST00000426538,NM_001126129,NM_001126130,NM_022770,uc002enh.3,uc002eni.3,uc002enj.3,uc010cdj.2_5end | |||
|cluster_id=chr16:58426296..58426302,+ | |||
|description=CAGE_peak_3_at_GINS3_5end | |||
|id=chr16:58426296..58426302,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000306;1.44e-09;4!CL:0002222;1.44e-09;4!CL:0002224;1.44e-09;4!CL:0002149;8.48e-07;6!CL:0002255;8.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,1.32e-09,4;CL:0002222,1.32e-09,4;CL:0002224,1.32e-09,4;CL:0002149,8.48e-07,6;CL:0002255,8.48e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.52e-12!106;DOID:162!1.65e-09!235;DOID:0050687!5.85e-09!143;DOID:14566!6.04e-09!239 | |||
|ontology_enrichment_disease_v019=DOID:3001;8.48e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,8.48e-07,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;9.07e-18;2!UBERON:0002757;9.07e-18;2!UBERON:0010134;9.07e-18;2!UBERON:0005408;9.07e-18;2!UBERON:0001899;9.07e-18;2!UBERON:0003296;1.44e-09;4!UBERON:0010133;1.44e-09;4!UBERON:0010077;1.44e-09;4!UBERON:0005389;1.44e-09;4!UBERON:0000484;1.44e-09;4!UBERON:0002784;1.44e-09;4!UBERON:0000965;1.44e-09;4!UBERON:0001803;1.44e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,6.48e-18,2;UBERON:0002757,6.48e-18,2;UBERON:0010134,6.48e-18,2;UBERON:0005408,6.48e-18,2;UBERON:0001899,6.48e-18,2;UBERON:0003296,1.22e-09,4;UBERON:0010133,1.22e-09,4;UBERON:0002784,1.22e-09,4;UBERON:0010077,1.32e-09,4;UBERON:0005389,1.32e-09,4;UBERON:0000484,1.32e-09,4;UBERON:0002546,1.32e-09,4;UBERON:0000965,1.32e-09,4;UBERON:0001803,1.32e-09,4;UBERON:0003073,1.32e-09,4;UBERON:0005426,1.32e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0.645484683583826,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,1.0429658368404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.255725123687061,0,0.50133791063589,0,0,0,0.189069634328136,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0.805658634218294,0,0,0.367663080345869,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.220587945464788,0.217879444092406,0.71181185733329,0.404493924480493,0.588664395376038,0,0,0,0.8231480226628,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,1.44331342025273,0.115930404975077,0,0.433099343283221,0,0,0,0,0,0,0,0.93733833986777,0,0.425325291727159,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0.602878754119172,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0.246381468041427,0,0.232420756919918,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0,0.170453254832202,0.178064071293475,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0.202182481573316,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0.159426272728822,0,0,0,0,0.280797178113459,0,0.156679895773023,0,0,0,0,0,0,0,0.223676107892416,0,0.19538809540204,0,1.23087398947712,0,0,0,0,0,0.121360521749513,0,0.284136146806413,0,0,0,0,0,0,0.329607748453519,0,0,0,0.251932747854276,0,0,0,0.179736702294654,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,0.221158519862449,0.295547618953547,0,0,0.278847488557207,0.153900517007594,0.113942055847001,0,0,0,0,0,0,0,0,0,0.451191321234361,0,0,0.189753732724185,0,0.210998064528027,0,0.282706142867882,0,0,0,0,0,0.247127877893006,0.208843899010911,0,0,0.234264445725339,0.182454789215666,0,0.728341138602278,0,0,0,0.063186579628488,3.00646838828985,0.311064574191741,0.664653872707185,0,0,0,0,0,0,0.0979923974143777,0.435296032902013,0,0,0.387025325156341,0.292357268344742,0.410577285266046,0,0,0,0.137041924646751,0,0.0633107959558787,0.391102765469606,0.0801588202515337,0,0,0.144090417154106,0.229073192331831,0,0.14405479798815,0,0,0,0,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0.164831716762333,0,0.196854963029498,0.0846733320657845,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0.335434687599266,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,0.37494122388632,0,0,0,0,0.144921028610825,0,0,0,0,0.251567901752575,0,0.228840068396924,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0.192619830407303,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0.345430341731199,0,0,0,0,0,0.655219697692825,0.245772908753719,0,0.39997479170986,0,0,0,0,0,0,0.383683113910955,0.754773679776773,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.192687675289379,0,0,0,0,0.0691572524642179,0,0,0.196295437002051,0,0,0.231051332300676,0,0,0.198916222116275,0,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0.255524855279191,1.60710550763486,0.672567444437648,0,0,0,0,0,0,0.0657727735628491,0.118193840883968,0,0,0.157115589916002,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24082554265728,0.955538938977433,0,0,0.121917924982269,0,0,0,0,0.233939463462106,0,0,0,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0.352894871715692,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0.378893491091197,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0.645484683583826,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,1.0429658368404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.255725123687061,0,0.50133791063589,0,0,0,0.189069634328136,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0.805658634218294,0,0,0.367663080345869,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.220587945464788,0.217879444092406,0.71181185733329,0.404493924480493,0.588664395376038,0,0,0,0.8231480226628,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,1.44331342025273,0.115930404975077,0,0.433099343283221,0,0,0,0,0,0,0,0.93733833986777,0,0.425325291727159,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0.602878754119172,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0.246381468041427,0,0.232420756919918,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0,0.170453254832202,0.178064071293475,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0.202182481573316,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0.159426272728822,0,0,0,0,0.280797178113459,0,0.156679895773023,0,0,0,0,0,0,0,0.223676107892416,0,0.19538809540204,0,1.23087398947712,0,0,0,0,0,0.121360521749513,0,0.284136146806413,0,0,0,0,0,0,0.329607748453519,0,0,0,0.251932747854276,0,0,0,0.179736702294654,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,0.221158519862449,0.295547618953547,0,0,0.278847488557207,0.153900517007594,0.113942055847001,0,0,0,0,0,0,0,0,0,0.451191321234361,0,0,0.189753732724185,0,0.210998064528027,0,0.282706142867882,0,0,0,0,0,0.247127877893006,0.208843899010911,0,0,0.234264445725339,0.182454789215666,0,0.728341138602278,0,0,0,0.063186579628488,3.00646838828985,0.311064574191741,0.664653872707185,0,0,0,0,0,0,0.0979923974143777,0.435296032902013,0,0,0.387025325156341,0.292357268344742,0.410577285266046,0,0,0,0.137041924646751,0,0.0633107959558787,0.391102765469606,0.0801588202515337,0,0,0.144090417154106,0.229073192331831,0,0.14405479798815,0,0,0,0,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0.164831716762333,0,0.196854963029498,0.0846733320657845,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0.335434687599266,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,0.37494122388632,0,0,0,0,0.144921028610825,0,0,0,0,0.251567901752575,0,0.228840068396924,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0.192619830407303,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0.345430341731199,0,0,0,0,0,0.655219697692825,0.245772908753719,0,0.39997479170986,0,0,0,0,0,0,0.383683113910955,0.754773679776773,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.192687675289379,0,0,0,0,0.0691572524642179,0,0,0.196295437002051,0,0,0.231051332300676,0,0,0.198916222116275,0,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0.255524855279191,1.60710550763486,0.672567444437648,0,0,0,0,0,0,0.0657727735628491,0.118193840883968,0,0,0.157115589916002,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24082554265728,0.955538938977433,0,0,0.121917924982269,0,0,0,0,0.233939463462106,0,0,0,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0.352894871715692,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0.378893491091197,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p3@GINS3 | |||
}} | }} |
Latest revision as of 05:55, 17 September 2015
Short description: | p3@GINS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GINS3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000328514, ENST00000426538, NM_001126129, NM_001126130, NM_022770, uc002enh.3, uc002eni.3, uc002enj.3, uc010cdj.2_5end |
EntrezGene: | GINS3 |
HGNC: | 25851 |
UniProt: | E9PB21Q9BRX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 1.32e-09 | 4 |
vertebrate lens cell | 1.32e-09 | 4 |
lens epithelial cell | 1.32e-09 | 4 |
epithelial cell of uterus | 8.48e-07 | 6 |
stromal cell of endometrium | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
pineal body | 6.48e-18 | 2 |
regional part of epithalamus | 6.48e-18 | 2 |
secretory circumventricular organ | 6.48e-18 | 2 |
circumventricular organ | 6.48e-18 | 2 |
epithalamus | 6.48e-18 | 2 |
gland of diencephalon | 1.22e-09 | 4 |
neuroendocrine gland | 1.22e-09 | 4 |
regional part of diencephalon | 1.22e-09 | 4 |
cuboidal epithelium | 1.32e-09 | 4 |
transparent eye structure | 1.32e-09 | 4 |
simple cuboidal epithelium | 1.32e-09 | 4 |
cranial placode | 1.32e-09 | 4 |
lens of camera-type eye | 1.32e-09 | 4 |
epithelium of lens | 1.32e-09 | 4 |
lens placode | 1.32e-09 | 4 |
lens vesicle | 1.32e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 8.48e-07 | 6 |