FFCP PHASE1:Hg19::chr20:57416646..57416660,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2778 | |EntrezGene=2778 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4392 | |HGNC=4392 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_ENST00000462499,ENST00000482112_5end | |association_with_transcript=-12bp_to_ENST00000462499,ENST00000482112_5end | ||
|cluster_id=chr20:57416646..57416660,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_54_at_GNAS_5end | |description=CAGE_peak_54_at_GNAS_5end | ||
|id=chr20:57416646..57416660,+ | |id=chr20:57416646..57416660,+ | ||
|ontology_enrichment_celltype=CL:0000039!2.85e-17!7;CL:0000586!2.85e-17!7 | |ontology_enrichment_celltype=CL:0000039!2.85e-17!7;CL:0000586!2.85e-17!7 | ||
|ontology_enrichment_celltype_v019=CL:0000540;8.97e-07;6!CL:0000404;8.97e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.48e-07,6;CL:0000031,8.48e-07,6;CL:0000404,8.48e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.06e-30;10!UBERON:0005564;2.06e-30;10!CL:0000031;8.97e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!1.57e-24!11;UBERON:0000473!6.72e-24!8;UBERON:0000007!2.35e-16!2;UBERON:0002148!5.41e-16!2;UBERON:0009662!5.41e-16!2;UBERON:0003127!1.43e-15!2;UBERON:0002298!7.44e-15!8;UBERON:0007023!1.65e-13!115;UBERON:0003076!4.74e-12!15;UBERON:0003057!4.74e-12!15;UBERON:0003101!5.01e-12!22;UBERON:0000079!5.01e-12!22;UBERON:0000988!5.69e-11!3;UBERON:0006331!5.69e-11!3;UBERON:0001896!1.77e-10!3;UBERON:0005290!1.77e-10!3;UBERON:0010096!1.77e-10!3;UBERON:0004733!5.78e-10!12;UBERON:0002028!5.78e-10!12;UBERON:0007277!5.78e-10!12;UBERON:0004732!3.29e-09!13;UBERON:0000991!5.38e-09!21;UBERON:0009196!5.38e-09!21;UBERON:0009117!5.38e-09!21;UBERON:0005564!5.38e-09!21;UBERON:0001736!7.75e-09!1;UBERON:0006298!7.75e-09!1;UBERON:0001301!9.02e-09!1;UBERON:0003296!1.27e-08!4;UBERON:0010133!1.27e-08!4;UBERON:0004176!1.41e-08!22;UBERON:0003133!6.22e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;9.17e-38;8!UBERON:0003135;9.75e-28;11!UBERON:0000007;1.07e-17;2!UBERON:0000991;5.94e-15;21!UBERON:0003101;2.61e-14;22!UBERON:0000079;2.61e-14;22!UBERON:0003296;1.57e-09;4!UBERON:0010133;1.57e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.04e-37,8;UBERON:0003135,1.07e-27,11;UBERON:0000007,1.07e-17,2;UBERON:0000991,6.23e-15,21;UBERON:0009196,6.23e-15,21;UBERON:0009117,6.23e-15,21;UBERON:0005564,6.23e-15,21;UBERON:0004176,2.73e-14,22;UBERON:0003101,2.73e-14,22;UBERON:0000079,2.73e-14,22;UBERON:0003296,1.57e-09,4;UBERON:0010133,1.57e-09,4;UBERON:0002323,3.26e-07,46;UBERON:0003133,6.12e-07,48;UBERON:0004458,8.23e-07,49 | |||
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|short_description=p54@GNAS | |short_description=p54@GNAS | ||
}} | }} |
Latest revision as of 05:54, 17 September 2015
Short description: | p54@GNAS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_54_at_GNAS_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -12bp_to_ENST00000462499, ENST00000482112_5end |
EntrezGene: | GNAS |
HGNC: | 4392 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.48e-07 | 6 |
neuroblast | 8.48e-07 | 6 |
electrically signaling cell | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 1.04e-37 | 8 |
male reproductive organ | 1.07e-27 | 11 |
pituitary gland | 1.07e-17 | 2 |
gonad | 6.23e-15 | 21 |
indifferent external genitalia | 6.23e-15 | 21 |
indifferent gonad | 6.23e-15 | 21 |
gonad primordium | 6.23e-15 | 21 |
external genitalia | 2.73e-14 | 22 |
male organism | 2.73e-14 | 22 |
male reproductive system | 2.73e-14 | 22 |
gland of diencephalon | 1.57e-09 | 4 |
neuroendocrine gland | 1.57e-09 | 4 |
body cavity | 3.26e-07 | 46 |
reproductive organ | 6.12e-07 | 48 |
body cavity or lining | 8.23e-07 | 49 |