FFCP PHASE1:Hg19::chr11:20070988..20071005,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=40743 | |HGNC=40743 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-139bp_to_ENST00000533767_5end | |association_with_transcript=-139bp_to_ENST00000533767_5end | ||
|cluster_id=chr11:20070988..20071005,- | |||
|description=CAGE_peak_2_at_NAV2-AS2_5end | |description=CAGE_peak_2_at_NAV2-AS2_5end | ||
|id=chr11:20070988..20071005,- | |id=chr11:20070988..20071005,- | ||
|ontology_enrichment_celltype=CL:0002541!2.40e-14!3;CL:0000197!9.99e-12!6;CL:0000098!9.99e-12!6;CL:0002167!9.99e-12!6;CL:0002615!9.10e-07!3 | |ontology_enrichment_celltype=CL:0002541!2.40e-14!3;CL:0000197!9.99e-12!6;CL:0000098!9.99e-12!6;CL:0002167!9.99e-12!6;CL:0002615!9.10e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.84e-98;3!CL:0000349;2.21e-16;19!CL:0000197;7.17e-07;6!CL:0000098;7.17e-07;6!CL:0002167;7.17e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.17e-98,3;CL:0000349,2.27e-16,19;CL:0000197,7.17e-07,6;CL:0000098,7.17e-07,6;CL:0002167,7.17e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0010227;5.05e-34;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!2.40e-14!3;UBERON:0000920!2.40e-14!3;UBERON:0003688!2.75e-11!6;UBERON:0002358!2.75e-11!6;UBERON:0003684!2.75e-11!6;UBERON:0001178!2.75e-11!6;UBERON:0003124!1.42e-10!7;UBERON:0007023!1.56e-09!115;UBERON:0007100!1.09e-08!27;UBERON:0004923!3.57e-08!57;UBERON:0005631!8.66e-08!14;UBERON:0000158!8.66e-08!14;UBERON:0004151!7.25e-07!3 | |ontology_enrichment_uberon=UBERON:0000476!2.40e-14!3;UBERON:0000920!2.40e-14!3;UBERON:0003688!2.75e-11!6;UBERON:0002358!2.75e-11!6;UBERON:0003684!2.75e-11!6;UBERON:0001178!2.75e-11!6;UBERON:0003124!1.42e-10!7;UBERON:0007023!1.56e-09!115;UBERON:0007100!1.09e-08!27;UBERON:0004923!3.57e-08!57;UBERON:0005631!8.66e-08!14;UBERON:0000158!8.66e-08!14;UBERON:0004151!7.25e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.84e-98;3!UBERON:0000920;1.84e-98;3!UBERON:0002079;5.05e-34;1!UBERON:0002171;8.34e-34;1!UBERON:0006518;8.34e-34;1!UBERON:0008949;8.34e-34;1!UBERON:0000101;8.34e-34;1!UBERON:0002167;8.34e-34;1!UBERON:0005631;2.64e-30;10!UBERON:0000158;2.64e-30;10!UBERON:0002081;9.07e-18;2!UBERON:0000478;3.86e-13;24!UBERON:0004151;2.59e-12;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.17e-98,3;UBERON:0003124,8.03e-43,7;UBERON:0002079,5.05e-34,1;UBERON:0002171,7.06e-34,1;UBERON:0006518,7.06e-34,1;UBERON:0008949,7.06e-34,1;UBERON:0000101,7.06e-34,1;UBERON:0002167,7.06e-34,1;UBERON:0005631,6.67e-22,14;UBERON:0000158,6.67e-22,14;UBERON:0002081,9.07e-18,2;UBERON:0010227,9.07e-18,2;UBERON:0000478,3.94e-13,24;UBERON:0004151,2.59e-12,3 | |||
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| ||
|short_description=p2@NAV2-AS2 | |short_description=p2@NAV2-AS2 | ||
}} | }} |
Latest revision as of 05:51, 17 September 2015
Short description: | p2@NAV2-AS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NAV2-AS2_5end |
Coexpression cluster: | NA |
Association with transcript: | -139bp_to_ENST00000533767_5end |
EntrezGene: | NA |
HGNC: | 40743 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.17e-98 | 3 |
extraembryonic cell | 2.27e-16 | 19 |
receptor cell | 7.17e-07 | 6 |
sensory epithelial cell | 7.17e-07 | 6 |
olfactory epithelial cell | 7.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.17e-98 | 3 |
chorion | 8.03e-43 | 7 |
left cardiac atrium | 5.05e-34 | 1 |
lower lobe of right lung | 7.06e-34 | 1 |
right lung lobe | 7.06e-34 | 1 |
lower lobe of lung | 7.06e-34 | 1 |
lobe of lung | 7.06e-34 | 1 |
right lung | 7.06e-34 | 1 |
extraembryonic membrane | 6.67e-22 | 14 |
membranous layer | 6.67e-22 | 14 |
cardiac atrium | 9.07e-18 | 2 |
future cardiac atrium | 9.07e-18 | 2 |
extraembryonic structure | 3.94e-13 | 24 |
cardiac chamber | 2.59e-12 | 3 |