FFCP PHASE1:Hg19::chr7:150786684..150786724,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116988 | |EntrezGene=116988 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16923 | |HGNC=16923 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-74bp_to_ENST00000476375_5end | |association_with_transcript=-74bp_to_ENST00000476375_5end | ||
|cluster_id=chr7:150786684..150786724,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_12_at_AGAP3_5end | |description=CAGE_peak_12_at_AGAP3_5end | ||
|id=chr7:150786684..150786724,+ | |id=chr7:150786684..150786724,+ | ||
|ontology_enrichment_celltype=CL:0000860;5.84e-102;33!CL:0002057;5.84e-102;33!CL:0000473;1.68e-74;39!CL:0000234;1.68e-74;39!CL:0000576;8.19e-56;48!CL:0000766;3.05e-40;69!CL:0000763;6.07e-18;100!CL:0000767;1.81e-15;3!CL:0002087;1.20e-14;104!CL:0000738;1.94e-11;136!CL:0001014;5.95e-11;2!CL:0001016;5.95e-11;2!CL:0000094;2.70e-10;8!CL:0002393;4.86e-08;6!CL:0002397;4.86e-08;6!CL:0000081;1.63e-07;11 | |ontology_enrichment_celltype=CL:0002057!1.03e-75!42;CL:0000860!5.75e-70!45;CL:0000766!2.13e-66!76;CL:0002009!3.09e-62!65;CL:0000557!7.48e-62!71;CL:0002194!7.55e-58!63;CL:0000576!7.55e-58!63;CL:0000040!7.55e-58!63;CL:0000559!7.55e-58!63;CL:0000839!1.39e-56!70;CL:0000763!8.81e-50!112;CL:0000049!8.81e-50!112;CL:0000738!5.96e-41!140;CL:0000037!8.47e-34!172;CL:0000566!8.47e-34!172;CL:0002031!3.26e-32!124;CL:0000988!3.49e-31!182;CL:0002032!4.25e-31!165;CL:0000837!4.25e-31!165;CL:0002087!1.36e-30!119;CL:0000840!1.24e-10!5;CL:0001029!1.24e-10!5;CL:0000134!1.61e-10!358;CL:0002320!4.61e-10!365;CL:0000990!1.06e-09!8;CL:0000219!1.25e-09!390;CL:0000767!4.34e-09!3;CL:0000094!1.42e-08!8;CL:0000451!8.19e-08!10;CL:0000034!1.71e-07!444;CL:0000723!2.50e-07!436;CL:0000048!4.29e-07!430 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;5.84e-102;33!CL:0002057;5.84e-102;33!CL:0000473;1.68e-74;39!CL:0000234;1.68e-74;39!CL:0000576;8.19e-56;48!CL:0000766;3.05e-40;69!CL:0000763;6.07e-18;100!CL:0000767;1.81e-15;3!CL:0002087;1.20e-14;104!CL:0000738;1.94e-11;136!CL:0001014;5.95e-11;2!CL:0001016;5.95e-11;2!CL:0000094;2.70e-10;8!CL:0002393;4.86e-08;6!CL:0002397;4.86e-08;6!CL:0000081;1.63e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.83e-106,42;CL:0002057,2.83e-106,42;CL:0000473,1.17e-98,48;CL:0000234,1.17e-98,48;CL:0002009,3.01e-85,61;CL:0000766,4.96e-81,72;CL:0002194,1.13e-77,59;CL:0000576,1.13e-77,59;CL:0000040,1.13e-77,59;CL:0000559,1.13e-77,59;CL:0000557,3.71e-77,67;CL:0000839,6.66e-69,66;CL:0000763,1.10e-58,108;CL:0000049,1.10e-58,108;CL:0000738,2.61e-45,136;CL:0002031,1.67e-40,120;CL:0002032,2.89e-37,161;CL:0000837,2.89e-37,161;CL:0002087,4.12e-37,115;CL:0000037,1.94e-35,168;CL:0000988,2.68e-33,177;CL:0000767,1.27e-15,3;CL:0000134,3.41e-13,354;CL:0002320,8.44e-13,361;CL:0000219,2.06e-11,386;CL:0001014,7.49e-11,2;CL:0001016,7.49e-11,2;CL:0000094,2.27e-10,8;CL:0000034,5.29e-10,441;CL:0000048,1.04e-09,427;CL:0000723,1.78e-09,433;CL:0000081,1.44e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;7.57e-77;42!CL:0000049;5.75e-14;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.42e-56!80;UBERON:0001474!1.33e-51!86;UBERON:0002390!1.90e-50!102;UBERON:0003061!1.90e-50!102;UBERON:0002193!7.99e-45!112;UBERON:0004765!3.36e-42!101;UBERON:0001434!3.36e-42!101;UBERON:0002405!3.12e-39!115;UBERON:0003081!1.13e-23!216;UBERON:0002204!3.97e-22!167;UBERON:0002384!1.93e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.21e-67,76;UBERON:0001474,4.83e-62,82;UBERON:0004765,5.13e-56,90;UBERON:0002405,5.08e-54,93;UBERON:0002390,5.81e-51,98;UBERON:0003061,5.81e-51,98;UBERON:0001434,7.99e-50,100;UBERON:0002193,1.10e-45,108;UBERON:0002204,2.56e-27,167;UBERON:0003081,6.68e-23,203;UBERON:0000926,2.35e-12,315;UBERON:0004120,2.35e-12,315;UBERON:0006603,2.35e-12,315;UBERON:0002384,2.91e-12,371 | |||
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| ||
|short_description=p12@AGAP3 | |short_description=p12@AGAP3 | ||
}} | }} |
Latest revision as of 05:49, 17 September 2015
Short description: | p12@AGAP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_AGAP3_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -74bp_to_ENST00000476375_5end |
EntrezGene: | AGAP3 |
HGNC: | 16923 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.21e-67 | 76 |
bone element | 4.83e-62 | 82 |
skeletal element | 5.13e-56 | 90 |
immune system | 5.08e-54 | 93 |
hematopoietic system | 5.81e-51 | 98 |
blood island | 5.81e-51 | 98 |
skeletal system | 7.99e-50 | 100 |
hemolymphoid system | 1.10e-45 | 108 |
musculoskeletal system | 2.56e-27 | 167 |
lateral plate mesoderm | 6.68e-23 | 203 |
mesoderm | 2.35e-12 | 315 |
mesoderm-derived structure | 2.35e-12 | 315 |
presumptive mesoderm | 2.35e-12 | 315 |
connective tissue | 2.91e-12 | 371 |