FFCP PHASE1:Hg19::chr11:20044096..20044116,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:20044096..20044116,+
|short_description=p19@NAV2
|description=CAGE_peak_19_at_NAV2_5end
|association_with_transcript=0bp_to_ENST00000533917_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=89797 | |EntrezGene=89797 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15997 | |HGNC=15997 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000533917_5end | |||
|cluster_id=chr11:20044096..20044116,+ | |||
|description=CAGE_peak_19_at_NAV2_5end | |||
|id=chr11:20044096..20044116,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.26e-24!254;CL:0000223!2.99e-19!59;CL:0002076!1.85e-17!43;CL:0002368!9.46e-15!13;CL:0002159!4.35e-14!13;CL:0002166!1.32e-08!3;CL:0000220!2.49e-08!246;CL:0002321!3.54e-08!248;CL:0000622!3.89e-08!5;CL:0002077!6.25e-08!33;CL:0000362!1.97e-07!8;CL:0000082!5.70e-07!19;CL:0002202!7.23e-07!9;CL:0002632!7.23e-07!9;CL:0000150!8.40e-07!9;CL:0000154!9.19e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002368;3.18e-26;13!CL:0002166;1.93e-13;3!CL:0000167;3.08e-11;1!CL:0000164;3.08e-11;1!CL:0000502;3.08e-11;1!CL:0000172;3.08e-11;1!CL:0000173;3.08e-11;1!CL:0002076;2.78e-10;42!CL:0000182;1.41e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,3.40e-26,13;CL:0000223,5.70e-18,58;CL:0002166,1.41e-13,3;CL:0002076,1.65e-13,42;CL:0000066,3.76e-12,253;CL:0000167,2.79e-11,1;CL:0000164,2.79e-11,1;CL:0000502,2.79e-11,1;CL:0000172,2.79e-11,1;CL:0000173,2.79e-11,1;CL:0002351,2.79e-11,1;CL:0000182,1.63e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000223;2.62e-13;58!UBERON:0009497;6.67e-12;13!CL:0002351;3.08e-11;1!UBERON:0001041;6.55e-11;30!UBERON:0004161;3.19e-08;11 | |||
|ontology_enrichment_disease=DOID:305!1.67e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:4430;3.08e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,2.79e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0001004!2.26e-15!72;UBERON:0004119!9.90e-12!169;UBERON:0000925!9.90e-12!169;UBERON:0006595!9.90e-12!169;UBERON:0000065!1.91e-11!53;UBERON:0002365!2.80e-10!31;UBERON:0002330!2.80e-10!31;UBERON:0001041!1.58e-09!98;UBERON:0004921!3.14e-09!129;UBERON:0004185!3.14e-09!129;UBERON:0001007!3.58e-09!155;UBERON:0001555!3.58e-09!155;UBERON:0007026!3.58e-09!155;UBERON:0004807!4.91e-08!28;UBERON:0000072!7.81e-08!46;UBERON:0000077!1.07e-07!130;UBERON:0008947!1.16e-07!38;UBERON:0003258!1.16e-07!38;UBERON:0005911!1.53e-07!82;UBERON:0000466!2.06e-07!126;UBERON:0004802!5.70e-07!19;UBERON:0000115!5.70e-07!19;UBERON:0000475!6.33e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;2.60e-10;4!UBERON:0008895;2.60e-10;4!UBERON:0000065;2.16e-09;44!UBERON:0011159;2.00e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,2.05e-10,4;UBERON:0008895,2.05e-10,4;UBERON:0000065,2.23e-10,54;UBERON:0004119,2.95e-09,160;UBERON:0000925,2.95e-09,160;UBERON:0006595,2.95e-09,160;UBERON:0001004,3.28e-09,74;UBERON:0011159,1.66e-08,5;UBERON:0001041,1.42e-07,87;UBERON:0010188,3.15e-07,6;UBERON:0002539,3.15e-07,6;UBERON:0008816,3.15e-07,6;UBERON:0008835,4.77e-07,22;UBERON:0003894,4.77e-07,22;UBERON:0009854,9.53e-07,23 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0.90361775633475,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0.486634870302636,0,0,0.087834785693126,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62028389576352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.548751427043128,3.37205259772859,0.100528972411631,0.185176890317059,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,1.87467667973554,1.34385702559088,0.992425680696705,0.626909658919938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,0.368323955743585,0,0,0,0,0.308061348417659,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,1.15699440752685,2.88285101047659,2.16941611240793,2.2254711788221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0.865999014529609,2.68120910214315,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04335996948536,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0,4.1827123283581,0,0,0,0.0897576444097721,0,0.638002319463839,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0.0870592065804026,0,0,0.0967563312890851,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0.576361668616424,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02418136999391,0.659326867049332,1.01105315781277,1.47641222272123,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0.537862017998534,1.53532157855556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499921631848426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.419638523158333,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0.255524855279191,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,1.0243108625637,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0.33883824611688,0,1.81155412280008,0,0,0.940634592723046,0,3.77082475362602,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.134704106029175,0.286888821570705,0,0.244209805832924,0,0,0,0,0,0,0,0,0 | ||
|short_description=p19@NAV2 | |||
}} | }} |
Latest revision as of 05:40, 17 September 2015
Short description: | p19@NAV2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_NAV2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000533917_5end |
EntrezGene: | NAV2 |
HGNC: | 15997 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 3.40e-26 | 13 |
endodermal cell | 5.70e-18 | 58 |
epithelial cell of Malassez | 1.41e-13 | 3 |
endo-epithelial cell | 1.65e-13 | 42 |
epithelial cell | 3.76e-12 | 253 |
peptide hormone secreting cell | 2.79e-11 | 1 |
enteroendocrine cell | 2.79e-11 | 1 |
type D enteroendocrine cell | 2.79e-11 | 1 |
somatostatin secreting cell | 2.79e-11 | 1 |
pancreatic D cell | 2.79e-11 | 1 |
progenitor cell of endocrine pancreas | 2.79e-11 | 1 |
hepatocyte | 1.63e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 2.05e-10 | 4 |
splanchnocranium | 2.05e-10 | 4 |
respiratory tract | 2.23e-10 | 54 |
endoderm-derived structure | 2.95e-09 | 160 |
endoderm | 2.95e-09 | 160 |
presumptive endoderm | 2.95e-09 | 160 |
respiratory system | 3.28e-09 | 74 |
primary subdivision of cranial skeletal system | 1.66e-08 | 5 |
foregut | 1.42e-07 | 87 |
protuberance | 3.15e-07 | 6 |
pharyngeal arch | 3.15e-07 | 6 |
embryonic head | 3.15e-07 | 6 |
hepatic diverticulum | 4.77e-07 | 22 |
liver primordium | 4.77e-07 | 22 |
digestive tract diverticulum | 9.53e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 2.79e-11 | 1 |