FFCP PHASE1:Hg19::chr3:186524234..186524303,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5984 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9972 | |||
|TSSclassifier=strong | |||
|UniProt=P35249,C9J8M3,F8WE44 | |||
|association_with_transcript=0bp_to_ENST00000296273,ENST00000418288,ENST00000449502,ENST00000494047,NM_002916,uc003fqz.2,uc011bsd.1_5end | |||
|cluster_id=chr3:186524234..186524303,- | |||
|coexpression_cluster_id=C1868 | |||
|description=CAGE_peak_1_at_RFC4_5end | |||
|id=chr3:186524234..186524303,- | |||
|ontology_enrichment_celltype=CL:0000066!1.97e-11!254;CL:0000003!5.94e-07!722 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.18e-11,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!9.93e-58!235;DOID:14566!1.05e-56!239;DOID:0050687!4.68e-32!143;DOID:305!6.75e-29!106;DOID:0050686!1.29e-25!137;DOID:2531!5.94e-19!51;DOID:0060083!5.94e-19!51;DOID:1240!1.85e-14!39;DOID:8692!2.46e-10!31;DOID:7!4.43e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:2531;1.07e-11;51!DOID:0060083;1.07e-11;51!DOID:1240;1.37e-11;39!DOID:8692;5.12e-10;31!DOID:305;2.41e-09;106!DOID:0050687;5.12e-08;143!DOID:14566;1.16e-07;239!DOID:162;2.45e-07;235 | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.86e-58,235;DOID:14566,1.04e-56,239;DOID:0050687,4.66e-32,143;DOID:305,6.73e-29,106;DOID:0050686,1.28e-25,137;DOID:2531,5.93e-19,51;DOID:0060083,5.93e-19,51;DOID:1240,1.85e-14,39;DOID:8692,2.46e-10,31;DOID:7,4.43e-08,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p1@RFC4 | |||
}} |
Latest revision as of 05:34, 17 September 2015
Short description: | p1@RFC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RFC4_5end |
Coexpression cluster: | C1868_hereditary_teratocarcinoma_adrenal_epitheloid_large_acantholytic_Reticulocytes |
Association with transcript: | 0bp_to_ENST00000296273, ENST00000418288, ENST00000449502, ENST00000494047, NM_002916, uc003fqz.2, uc011bsd.1_5end |
EntrezGene: | RFC4 |
HGNC: | 9972 |
UniProt: | P35249C9J8M3F8WE44 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.18e-11 | 253 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.86e-58 | 235 |
disease of cellular proliferation | 1.04e-56 | 239 |
cell type cancer | 4.66e-32 | 143 |
carcinoma | 6.73e-29 | 106 |
organ system cancer | 1.28e-25 | 137 |
hematologic cancer | 5.93e-19 | 51 |
immune system cancer | 5.93e-19 | 51 |
leukemia | 1.85e-14 | 39 |
myeloid leukemia | 2.46e-10 | 31 |
disease of anatomical entity | 4.43e-08 | 39 |