FFCP PHASE1:Hg19::chr11:19798964..19798993,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89797 | |EntrezGene=89797 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15997 | |HGNC=15997 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-19bp_to_ENST00000527559_5end | |association_with_transcript=-19bp_to_ENST00000527559_5end | ||
|cluster_id=chr11:19798964..19798993,+ | |||
|description=CAGE_peak_13_at_NAV2_5end | |description=CAGE_peak_13_at_NAV2_5end | ||
|id=chr11:19798964..19798993,+ | |id=chr11:19798964..19798993,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.80e-17;5!CL:0000540;4.07e-09;6!CL:0000404;4.07e-09;6!CL:0000182;1.51e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,9.14e-18,5;CL:0000540,4.09e-09,6;CL:0000031,4.09e-09,6;CL:0000404,4.09e-09,6;CL:0000182,1.55e-07,12;CL:0000047,6.23e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000031;4.07e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.27e-16!115;UBERON:0001049!5.09e-14!57;UBERON:0005068!5.09e-14!57;UBERON:0006241!5.09e-14!57;UBERON:0007135!5.09e-14!57;UBERON:0003075!2.97e-12!86;UBERON:0007284!2.97e-12!86;UBERON:0002346!5.26e-11!90;UBERON:0005743!7.36e-11!86;UBERON:0001017!8.64e-11!82;UBERON:0000073!1.51e-10!94;UBERON:0001016!1.51e-10!94;UBERON:0002616!3.03e-10!59;UBERON:0002020!4.58e-10!34;UBERON:0003528!4.58e-10!34;UBERON:0004111!7.31e-10!241;UBERON:0001893!1.80e-09!34;UBERON:0002780!2.27e-09!41;UBERON:0001890!2.27e-09!41;UBERON:0006240!2.27e-09!41;UBERON:0000477!2.92e-09!286;UBERON:0002791!4.65e-09!33;UBERON:0003080!6.09e-09!42;UBERON:0001869!1.09e-08!32;UBERON:0000955!7.75e-08!69;UBERON:0006238!7.75e-08!69;UBERON:0000119!8.74e-08!312;UBERON:0000483!9.25e-08!309;UBERON:0000956!1.97e-07!25;UBERON:0000203!1.97e-07!25;UBERON:0000025!6.92e-07!194;UBERON:0000481!8.89e-07!347;UBERON:0003076!9.14e-07!15;UBERON:0003057!9.14e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002148;2.11e-11;2!UBERON:0001829;2.11e-11;2!UBERON:0006331;2.11e-11;2!UBERON:0009662;2.11e-11;2!UBERON:0001044;2.28e-08;6!UBERON:0003293;2.28e-08;6!UBERON:0003294;2.28e-08;6!UBERON:0010047;2.28e-08;6!UBERON:0003408;2.28e-08;6!UBERON:0000167;2.28e-08;6!UBERON:0000988;6.94e-08;3!UBERON:0002365;1.00e-07;31!UBERON:0002330;1.00e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.90e-11,2;UBERON:0002148,6.69e-11,2;UBERON:0006331,6.69e-11,2;UBERON:0009662,6.69e-11,2;UBERON:0001044,1.89e-08,6;UBERON:0003293,1.89e-08,6;UBERON:0003294,1.89e-08,6;UBERON:0010047,1.89e-08,6;UBERON:0000167,1.89e-08,6;UBERON:0002365,1.15e-07,31;UBERON:0002330,1.15e-07,31;UBERON:0000988,1.49e-07,3 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0.331397375727916,0,0,0,0,0.369363174230364,0,0.626909442956176,0.286235987131057,0.136874425072884,0.251085279189606,0.687720651731561,0.410502947249729,0.0787107813136792,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0,0,0,1.32208974556972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0.144846518960824,0,0,0.283604451492204,0.221729397462564,0.087834785693126,0.327447688744282,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0.402829317109147,0,0.24406205754817,0,0,0.446498641420399,0.44905874525234,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,1.06748995729705,0.24666754841716,0,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0.257640540045629,0,0.168776332241266,0,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0,2.5614478287215,2.78312513475119,1.97529702878181,0.621966330092223,1.26160425437814,5.10968302706162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,7.86261773342101,3.54473944008842,0,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0.433099343283221,0.925971025153221,1.14152491340759,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0.190493682876507,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0.112085143993527,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0.271265023699736,0.623912584592421,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0.496215615637554,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.120859449591622,0,0,0.114814448164607,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,1.03041011647722,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.141405431953713,1.13008116620243,0,0,0,0,0.655894752046633,0,0,0,0,0.0982490410131212,0,0.354761064070598,0.211107635297664,0.329294892959902,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0.296964680832639,0,0.994147647766298,0.281338832821026,0,0,0,0.597743964753209,0.276283915531148,2.01546198283421,0,0.123084805461069,0,0.179736702294654,0.179021174675609,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0.508507300585533,0,0.689486746482929,0,0,0,0.482385754501632,0,0.663475559587348,0.295547618953547,0.219385397153973,0,0.139423744278603,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0.424059214301822,0,0.995261931078505,0.0884575645033392,0,1.18608451472249,0.988511511572023,1.77517314159274,0.202203398942031,0,0,0,0.978323094660449,0,1.57833761139756,0,0.30607276163049,0.31593289814244,0.450970258243478,0.622129148383483,0,0,0,0,0,0,0,0.0979923974143777,0,0.873633341210151,0,0,0,0,0,0,0,0,0,0.126621591911757,0.586654148204409,0.160317640503067,0.426905989478705,0.599428828746391,0,0,0.514784993585894,0,0.248505071130865,0,0.135904206073614,0,0,0,0.600420288709789,0.547621515567972,0,0,0.788662062837943,0,0.229160424011684,0.717873024576814,0.199679000498991,0,0,0.201550417460179,0,1.16495949527454,0,0,0,0.590564889088493,0,0.795229689809303,0.136203406111576,6.75163223553081,3.43848591493084,5.81616473240859,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,0,1.0342636508924,1.05786081394152,0,0.704815022316672,0.854299300541557,2.04365596629566,0.828478110694391,0.496166021811951,0.197611631897944,0,0.638341257770182,0,0,0.612691153526923,0,0.314108192500469,0,0.122026264901963,0.250381861413,0.573409195690071,0.221858103073705,0.310482014706917,0,0,0.454947352624943,0,0,0,1.1593682288866,0.149254802886874,0,0.554805861502613,0,0,0,0,0,0,0.147855149989634,0,0.449803112163605,0,0,0,0,0,0,0.406870733204662,0.181848659202559,0.214821114084977,0,0.398095888698616,0,0,0,0,0,1.92997432237433,0,0,0.463044948647668,0,0,0,0.219284049578707,0,0.38582807654183,0.506827321959218,0,0.345430341731199,0,0.553033744606923,0,0,0.654261577023377,0,0.245772908753719,0,0,0,0,0,0,0,0,0.383683113910955,0.107824811396682,0,0.218419276384028,0,0,0,0,0,0.0788617450012534,0,0.352675943690684,0.3062454773532,0.0642292250964595,0,0.478901577171454,0,0.756215088665154,0.276629009856872,0.484426936895553,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0.150420656698515,0,0,0,0.655087670040387,0.147856086217045,0.270150338473579,0,0.206686796501184,0.19024743058172,0.546974809018219,1.09651553371436,0,0,0.383287282918786,0,0,0,0.455324382702595,0.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| ||
|short_description=p13@NAV2 | |short_description=p13@NAV2 | ||
}} | }} |
Latest revision as of 05:25, 17 September 2015
Short description: | p13@NAV2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_NAV2_5end |
Coexpression cluster: | NA |
Association with transcript: | -19bp_to_ENST00000527559_5end |
EntrezGene: | NAV2 |
HGNC: | 15997 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 9.14e-18 | 5 |
neuron | 4.09e-09 | 6 |
neuroblast | 4.09e-09 | 6 |
electrically signaling cell | 4.09e-09 | 6 |
hepatocyte | 1.55e-07 | 12 |
neuronal stem cell | 6.23e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 1.90e-11 | 2 |
locus ceruleus | 6.69e-11 | 2 |
brainstem nucleus | 6.69e-11 | 2 |
hindbrain nucleus | 6.69e-11 | 2 |
saliva-secreting gland | 1.89e-08 | 6 |
gland of oral region | 1.89e-08 | 6 |
gland of foregut | 1.89e-08 | 6 |
oral gland | 1.89e-08 | 6 |
oral cavity | 1.89e-08 | 6 |
exocrine gland | 1.15e-07 | 31 |
exocrine system | 1.15e-07 | 31 |
pons | 1.49e-07 | 3 |