FFCP PHASE1:Hg19::chr15:33359020..33359043,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q68DA7 | |UniProt=Q68DA7 | ||
|association_with_transcript=0bp_to_AK127078_5end | |association_with_transcript=0bp_to_AK127078_5end | ||
|cluster_id=chr15:33359020..33359043,- | |||
|coexpression_cluster_id=C12 | |coexpression_cluster_id=C12 | ||
|description=CAGE_peak_1_at_AK127078_5end | |description=CAGE_peak_1_at_AK127078_5end | ||
|id=chr15:33359020..33359043,- | |id=chr15:33359020..33359043,- | ||
|ontology_enrichment_celltype=CL:0002274!2.01e-10!5;CL:0000457!2.01e-10!5;CL:0002191!2.01e-10!5;CL:0000097!2.01e-10!5;CL:0000831!2.01e-10!5;CL:0002028!2.01e-10!5;CL:0000163!1.20e-07!9 | |ontology_enrichment_celltype=CL:0002274!2.01e-10!5;CL:0000457!2.01e-10!5;CL:0002191!2.01e-10!5;CL:0000097!2.01e-10!5;CL:0000831!2.01e-10!5;CL:0002028!2.01e-10!5;CL:0000163!1.20e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000097;3.30e-27;5!CL:0000163;3.53e-21;9!CL:0002178;4.87e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.99e-27,5;CL:0002028,3.99e-27,5;CL:0000163,4.68e-21,9;CL:0002178,4.38e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.80e-16;5!UBERON:0001041;1.26e-12;30!UBERON:0008947;2.72e-10;29 | |||
|ontology_enrichment_disease=DOID:299!1.06e-09!25;DOID:0050687!1.01e-07!143;DOID:305!9.77e-07!106 | |ontology_enrichment_disease=DOID:299!1.06e-09!25;DOID:0050687!1.01e-07!143;DOID:305!9.77e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:299;2.22e-15;25!DOID:5093;2.82e-12;4!DOID:1612;2.82e-12;4!DOID:0050615;3.88e-11;16!DOID:1324;1.91e-08;15!DOID:3111;7.55e-07;1!DOID:3603;7.55e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:299,2.13e-15,25;DOID:5093,3.10e-12,4;DOID:1612,3.10e-12,4;DOID:0050615,4.10e-11,16;DOID:305,2.02e-10,106;DOID:0050687,6.24e-09,143;DOID:1324,1.84e-08,15;DOID:3111,7.77e-07,1;DOID:3603,7.77e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.69e-11!115;UBERON:0002046!1.88e-09!5;UBERON:0004117!1.88e-09!5;UBERON:0007689!1.88e-09!5;UBERON:0007123!1.88e-09!5;UBERON:0003091!1.88e-09!5;UBERON:0009722!5.08e-07!11;UBERON:0007690!5.08e-07!11 | |ontology_enrichment_uberon=UBERON:0007023!3.69e-11!115;UBERON:0002046!1.88e-09!5;UBERON:0004117!1.88e-09!5;UBERON:0007689!1.88e-09!5;UBERON:0007123!1.88e-09!5;UBERON:0003091!1.88e-09!5;UBERON:0009722!5.08e-07!11;UBERON:0007690!5.08e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0002046;1.80e-16;5!UBERON:0002048;5.86e-14;22!UBERON:0000117;5.86e-14;22!UBERON:0000171;5.86e-14;22!UBERON:0000170;5.86e-14;22!UBERON:0000007;2.40e-11;2!UBERON:0005178;6.12e-08;34!UBERON:0002224;6.12e-08;34!UBERON:0000915;2.44e-07;52!UBERON:0002294;2.93e-07;7!UBERON:0001173;2.93e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,1.25e-16,5;UBERON:0004117,1.25e-16,5;UBERON:0007689,1.25e-16,5;UBERON:0007123,1.25e-16,5;UBERON:0003091,1.25e-16,5;UBERON:0002048,5.77e-14,22;UBERON:0000117,5.77e-14,22;UBERON:0000171,5.77e-14,22;UBERON:0000170,5.77e-14,22;UBERON:0005597,5.77e-14,22;UBERON:0000118,5.77e-14,22;UBERON:0005911,1.33e-12,82;UBERON:0000007,1.85e-11,2;UBERON:0000915,6.03e-10,52;UBERON:0002294,2.15e-09,9;UBERON:0001173,2.15e-09,9;UBERON:0004912,2.15e-09,9;UBERON:0005178,1.33e-08,34;UBERON:0002224,1.33e-08,34;UBERON:0001007,1.50e-08,145;UBERON:0001555,1.50e-08,145;UBERON:0007026,1.50e-08,145;UBERON:0002394,2.18e-08,6;UBERON:0003928,2.18e-08,6;UBERON:0005181,2.53e-08,35;UBERON:0005153,8.29e-08,37;UBERON:0009722,1.27e-07,11;UBERON:0007690,1.27e-07,11;UBERON:0008947,1.43e-07,38;UBERON:0003258,1.43e-07,38;UBERON:0001041,1.87e-07,87;UBERON:0004119,2.19e-07,160;UBERON:0000925,2.19e-07,160;UBERON:0006595,2.19e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973269740605272,0,0.221729397462564,0.175669571386252,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23486899728753,0,0,0,0,0,0,0,0,0,0,0.500474079487857,0,0.877955241761676,0.30648779579902,1.05166641234618,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,2.37061319387782,3.43394464837949,0,0,0,0,0,0,0,0,0,13.3019074231905,1.14462964217194,43.5389042635621,37.9035477486609,56.1778828747391,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87549826589899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601892199455438,0,0,0.664225598535437,0.737476674166813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.27470839445503,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,2.78271762557265,0,0,0.398495976502139,0.276283915531148,0,0,0,0,6.0211795268709,0,0,0,0,0,0,0.0927680981618513,0,1.30213880542617,0,0.724999575434793,0.568967241427498,3.55955110409873,0.236387681767936,0.344743373241465,0,0,0,0,0,0,0,0,0,0,1.61595542857974,0,0.46112780877612,0.897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0.51595809741485,0,0,0,0.193978032976839,0,0,0,0,0.253243183823515,0,1.68333522528221,0,0.999048047910651,3.74635084600676,0,0,0,0.372757606696298,0,0,0,0.509991088181609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0.182248669974074,0,1.10327990218877,0.157363764404994,1.16160370171347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81926008926669,3.84434685243701,2.20086027139532,2.48543433208317,0,0,0,2.55336503108073,0,0,0,0,2.04170325125305,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.983091635014877,4.22624246717254,0,0,0,0,4.60264875629602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0.762764190934334,0,0,0.300841313397029,0.60511520611056,0.781514011233092,0,0.327543835020193,2.21784129325568,0.202612753855184,0,0,0.19024743058172,0,0.548257766857182,0.496211178389294,0,0.127762427639595,0,0,1.82089681270989,3.41493287026946,0,0,0,0,0.197318320688547,0,0,0.313972371402056,0,0,0,0,0,0,0,0,0.347716544605159,0,0,0,0,0,0.473328002922261,0.170426809518315,0,1.3746412112643,0,0,0,2.65005630761156,0,0,0,0,0.485710993059139,0,0,0,0.22589216407792,0,3.01925687133347,0,0,0,0.735444965261716,2.12108892391463,0,0,0,0,0,0,0,0,0,1.60482733378337,0,0,0,0,0.203974470572744,0,0,1.11598505450025,0,0.865253124247578,0,0,0,0.101988829741982,0,0.275684698604535,0.250707539292375,0.227336094654718,0,0,0,0.213233981900981,0.952257725854961,0.129177819672012,0.558672428662721,2.80329656451534,1.20929600728513,1.61693751166575,0,0,0.0673520530145875,0.143444410785353,0,0.651226148887796,0,0,0.269475606319761,0,0.244482888365733,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973269740605272,0,0.221729397462564,0.175669571386252,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23486899728753,0,0,0,0,0,0,0,0,0,0,0.500474079487857,0,0.877955241761676,0.30648779579902,1.05166641234618,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,2.37061319387782,3.43394464837949,0,0,0,0,0,0,0,0,0,13.3019074231905,1.14462964217194,43.5389042635621,37.9035477486609,56.1778828747391,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87549826589899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601892199455438,0,0,0.664225598535437,0.737476674166813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.27470839445503,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,2.78271762557265,0,0,0.398495976502139,0.276283915531148,0,0,0,0,6.0211795268709,0,0,0,0,0,0,0.0927680981618513,0,1.30213880542617,0,0.724999575434793,0.568967241427498,3.55955110409873,0.236387681767936,0.344743373241465,0,0,0,0,0,0,0,0,0,0,1.61595542857974,0,0.46112780877612,0.897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0.51595809741485,0,0,0,0.193978032976839,0,0,0,0,0.253243183823515,0,1.68333522528221,0,0.999048047910651,3.74635084600676,0,0,0,0.372757606696298,0,0,0,0.509991088181609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0.182248669974074,0,1.10327990218877,0.157363764404994,1.16160370171347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81926008926669,3.84434685243701,2.20086027139532,2.48543433208317,0,0,0,2.55336503108073,0,0,0,0,2.04170325125305,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.983091635014877,4.22624246717254,0,0,0,0,4.60264875629602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0.762764190934334,0,0,0.300841313397029,0.60511520611056,0.781514011233092,0,0.327543835020193,2.21784129325568,0.202612753855184,0,0,0.19024743058172,0,0.548257766857182,0.496211178389294,0,0.127762427639595,0,0,1.82089681270989,3.41493287026946,0,0,0,0,0.197318320688547,0,0,0.313972371402056,0,0,0,0,0,0,0,0,0.347716544605159,0,0,0,0,0,0.473328002922261,0.170426809518315,0,1.3746412112643,0,0,0,2.65005630761156,0,0,0,0,0.485710993059139,0,0,0,0.22589216407792,0,3.01925687133347,0,0,0,0.735444965261716,2.12108892391463,0,0,0,0,0,0,0,0,0,1.60482733378337,0,0,0,0,0.203974470572744,0,0,1.11598505450025,0,0.865253124247578,0,0,0,0.101988829741982,0,0.275684698604535,0.250707539292375,0.227336094654718,0,0,0,0.213233981900981,0.952257725854961,0.129177819672012,0.558672428662721,2.80329656451534,1.20929600728513,1.61693751166575,0,0,0.0673520530145875,0.143444410785353,0,0.651226148887796,0,0,0.269475606319761,0,0.244482888365733,0,0,0.402547587182052,0 | ||
|short_description=p1@AK127078 | |short_description=p1@AK127078 | ||
}} | }} |
Latest revision as of 05:18, 17 September 2015
Short description: | p1@AK127078 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK127078_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 0bp_to_AK127078_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.99e-27 | 5 |
basophil mast progenitor cell | 3.99e-27 | 5 |
endocrine cell | 4.68e-21 | 9 |
epithelial cell of stomach | 4.38e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 1.25e-16 | 5 |
pharyngeal pouch | 1.25e-16 | 5 |
thyroid diverticulum | 1.25e-16 | 5 |
pharyngeal pouch 2 | 1.25e-16 | 5 |
thyroid primordium | 1.25e-16 | 5 |
lung | 5.77e-14 | 22 |
respiratory tube | 5.77e-14 | 22 |
respiration organ | 5.77e-14 | 22 |
pair of lungs | 5.77e-14 | 22 |
lung primordium | 5.77e-14 | 22 |
lung bud | 5.77e-14 | 22 |
endo-epithelium | 1.33e-12 | 82 |
pituitary gland | 1.85e-11 | 2 |
thoracic segment of trunk | 6.03e-10 | 52 |
biliary system | 2.15e-09 | 9 |
biliary tree | 2.15e-09 | 9 |
biliary bud | 2.15e-09 | 9 |
thoracic cavity element | 1.33e-08 | 34 |
thoracic cavity | 1.33e-08 | 34 |
digestive system | 1.50e-08 | 145 |
digestive tract | 1.50e-08 | 145 |
primitive gut | 1.50e-08 | 145 |
bile duct | 2.18e-08 | 6 |
digestive system duct | 2.18e-08 | 6 |
thoracic segment organ | 2.53e-08 | 35 |
epithelial bud | 8.29e-08 | 37 |
entire pharyngeal arch endoderm | 1.27e-07 | 11 |
early pharyngeal endoderm | 1.27e-07 | 11 |
respiratory primordium | 1.43e-07 | 38 |
endoderm of foregut | 1.43e-07 | 38 |
foregut | 1.87e-07 | 87 |
endoderm-derived structure | 2.19e-07 | 160 |
endoderm | 2.19e-07 | 160 |
presumptive endoderm | 2.19e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 2.13e-15 | 25 |
thoracic cancer | 3.10e-12 | 4 |
breast cancer | 3.10e-12 | 4 |
respiratory system cancer | 4.10e-11 | 16 |
carcinoma | 2.02e-10 | 106 |
cell type cancer | 6.24e-09 | 143 |
lung cancer | 1.84e-08 | 15 |
cystadenocarcinoma | 7.77e-07 | 1 |
mucinous cystadenocarcinoma | 7.77e-07 | 1 |