FFCP PHASE1:Hg19::chr15:33359020..33359043,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q68DA7 | |UniProt=Q68DA7 | ||
|association_with_transcript=0bp_to_AK127078_5end | |association_with_transcript=0bp_to_AK127078_5end | ||
|cluster_id=chr15:33359020..33359043,- | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_1_at_AK127078_5end | |description=CAGE_peak_1_at_AK127078_5end | ||
|id=chr15:33359020..33359043,- | |id=chr15:33359020..33359043,- | ||
|ontology_enrichment_celltype=CL:0002274!2.01e-10!5;CL:0000457!2.01e-10!5;CL:0002191!2.01e-10!5;CL:0000097!2.01e-10!5;CL:0000831!2.01e-10!5;CL:0002028!2.01e-10!5;CL:0000163!1.20e-07!9 | |ontology_enrichment_celltype=CL:0002274!2.01e-10!5;CL:0000457!2.01e-10!5;CL:0002191!2.01e-10!5;CL:0000097!2.01e-10!5;CL:0000831!2.01e-10!5;CL:0002028!2.01e-10!5;CL:0000163!1.20e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000097;3.30e-27;5!CL:0000163;3.53e-21;9!CL:0002178;4.87e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.99e-27,5;CL:0002028,3.99e-27,5;CL:0000163,4.68e-21,9;CL:0002178,4.38e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.80e-16;5!UBERON:0001041;1.26e-12;30!UBERON:0008947;2.72e-10;29 | |||
|ontology_enrichment_disease=DOID:299!1.06e-09!25;DOID:0050687!1.01e-07!143;DOID:305!9.77e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:299;2.22e-15;25!DOID:5093;2.82e-12;4!DOID:1612;2.82e-12;4!DOID:0050615;3.88e-11;16!DOID:1324;1.91e-08;15!DOID:3111;7.55e-07;1!DOID:3603;7.55e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:299,2.13e-15,25;DOID:5093,3.10e-12,4;DOID:1612,3.10e-12,4;DOID:0050615,4.10e-11,16;DOID:305,2.02e-10,106;DOID:0050687,6.24e-09,143;DOID:1324,1.84e-08,15;DOID:3111,7.77e-07,1;DOID:3603,7.77e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.69e-11!115;UBERON:0002046!1.88e-09!5;UBERON:0004117!1.88e-09!5;UBERON:0007689!1.88e-09!5;UBERON:0007123!1.88e-09!5;UBERON:0003091!1.88e-09!5;UBERON:0009722!5.08e-07!11;UBERON:0007690!5.08e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;1.80e-16;5!UBERON:0002048;5.86e-14;22!UBERON:0000117;5.86e-14;22!UBERON:0000171;5.86e-14;22!UBERON:0000170;5.86e-14;22!UBERON:0000007;2.40e-11;2!UBERON:0005178;6.12e-08;34!UBERON:0002224;6.12e-08;34!UBERON:0000915;2.44e-07;52!UBERON:0002294;2.93e-07;7!UBERON:0001173;2.93e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,1.25e-16,5;UBERON:0004117,1.25e-16,5;UBERON:0007689,1.25e-16,5;UBERON:0007123,1.25e-16,5;UBERON:0003091,1.25e-16,5;UBERON:0002048,5.77e-14,22;UBERON:0000117,5.77e-14,22;UBERON:0000171,5.77e-14,22;UBERON:0000170,5.77e-14,22;UBERON:0005597,5.77e-14,22;UBERON:0000118,5.77e-14,22;UBERON:0005911,1.33e-12,82;UBERON:0000007,1.85e-11,2;UBERON:0000915,6.03e-10,52;UBERON:0002294,2.15e-09,9;UBERON:0001173,2.15e-09,9;UBERON:0004912,2.15e-09,9;UBERON:0005178,1.33e-08,34;UBERON:0002224,1.33e-08,34;UBERON:0001007,1.50e-08,145;UBERON:0001555,1.50e-08,145;UBERON:0007026,1.50e-08,145;UBERON:0002394,2.18e-08,6;UBERON:0003928,2.18e-08,6;UBERON:0005181,2.53e-08,35;UBERON:0005153,8.29e-08,37;UBERON:0009722,1.27e-07,11;UBERON:0007690,1.27e-07,11;UBERON:0008947,1.43e-07,38;UBERON:0003258,1.43e-07,38;UBERON:0001041,1.87e-07,87;UBERON:0004119,2.19e-07,160;UBERON:0000925,2.19e-07,160;UBERON:0006595,2.19e-07,160 | |||
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| ||
|short_description=p1@AK127078 | |short_description=p1@AK127078 | ||
}} | }} |
Latest revision as of 05:18, 17 September 2015
Short description: | p1@AK127078 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK127078_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 0bp_to_AK127078_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.99e-27 | 5 |
basophil mast progenitor cell | 3.99e-27 | 5 |
endocrine cell | 4.68e-21 | 9 |
epithelial cell of stomach | 4.38e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 1.25e-16 | 5 |
pharyngeal pouch | 1.25e-16 | 5 |
thyroid diverticulum | 1.25e-16 | 5 |
pharyngeal pouch 2 | 1.25e-16 | 5 |
thyroid primordium | 1.25e-16 | 5 |
lung | 5.77e-14 | 22 |
respiratory tube | 5.77e-14 | 22 |
respiration organ | 5.77e-14 | 22 |
pair of lungs | 5.77e-14 | 22 |
lung primordium | 5.77e-14 | 22 |
lung bud | 5.77e-14 | 22 |
endo-epithelium | 1.33e-12 | 82 |
pituitary gland | 1.85e-11 | 2 |
thoracic segment of trunk | 6.03e-10 | 52 |
biliary system | 2.15e-09 | 9 |
biliary tree | 2.15e-09 | 9 |
biliary bud | 2.15e-09 | 9 |
thoracic cavity element | 1.33e-08 | 34 |
thoracic cavity | 1.33e-08 | 34 |
digestive system | 1.50e-08 | 145 |
digestive tract | 1.50e-08 | 145 |
primitive gut | 1.50e-08 | 145 |
bile duct | 2.18e-08 | 6 |
digestive system duct | 2.18e-08 | 6 |
thoracic segment organ | 2.53e-08 | 35 |
epithelial bud | 8.29e-08 | 37 |
entire pharyngeal arch endoderm | 1.27e-07 | 11 |
early pharyngeal endoderm | 1.27e-07 | 11 |
respiratory primordium | 1.43e-07 | 38 |
endoderm of foregut | 1.43e-07 | 38 |
foregut | 1.87e-07 | 87 |
endoderm-derived structure | 2.19e-07 | 160 |
endoderm | 2.19e-07 | 160 |
presumptive endoderm | 2.19e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 2.13e-15 | 25 |
thoracic cancer | 3.10e-12 | 4 |
breast cancer | 3.10e-12 | 4 |
respiratory system cancer | 4.10e-11 | 16 |
carcinoma | 2.02e-10 | 106 |
cell type cancer | 6.24e-09 | 143 |
lung cancer | 1.84e-08 | 15 |
cystadenocarcinoma | 7.77e-07 | 1 |
mucinous cystadenocarcinoma | 7.77e-07 | 1 |