FFCP PHASE1:Hg19::chr16:57954525..57954533,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:57954525..57954533,- | |||
|coexpression_cluster_id=C406 | |coexpression_cluster_id=C406 | ||
|description=CAGE_peak_at_chr16:57954525..57954533,- | |description=CAGE_peak_at_chr16:57954525..57954533,- | ||
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|ontology_enrichment_celltype=CL:0002159!6.02e-40!13;CL:0002076!3.53e-23!43;CL:0002166!3.55e-21!3;CL:0002621!3.17e-20!3;CL:0002368!6.99e-18!13;CL:0000223!3.30e-16!59;CL:0002077!7.24e-15!33;CL:0000317!1.89e-14!2;CL:1000448!1.89e-14!2;CL:0002308!1.89e-14!2;CL:0002140!1.89e-14!2;CL:0000575!5.81e-14!2;CL:0000362!1.86e-13!8;CL:0000066!2.32e-11!254;CL:0002251!1.23e-10!21;CL:0000068!1.44e-09!3;CL:0000069!1.44e-09!3;CL:0000307!1.44e-09!3;CL:0000377!1.44e-09!3;CL:0000220!1.79e-08!246;CL:0002321!2.27e-08!248;CL:0000076!4.67e-07!62 | |ontology_enrichment_celltype=CL:0002159!6.02e-40!13;CL:0002076!3.53e-23!43;CL:0002166!3.55e-21!3;CL:0002621!3.17e-20!3;CL:0002368!6.99e-18!13;CL:0000223!3.30e-16!59;CL:0002077!7.24e-15!33;CL:0000317!1.89e-14!2;CL:1000448!1.89e-14!2;CL:0002308!1.89e-14!2;CL:0002140!1.89e-14!2;CL:0000575!5.81e-14!2;CL:0000362!1.86e-13!8;CL:0000066!2.32e-11!254;CL:0002251!1.23e-10!21;CL:0000068!1.44e-09!3;CL:0000069!1.44e-09!3;CL:0000307!1.44e-09!3;CL:0000377!1.44e-09!3;CL:0000220!1.79e-08!246;CL:0002321!2.27e-08!248;CL:0000076!4.67e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0002166;8.69e-55;3!CL:0002159;2.24e-32;14!CL:0002368;2.28e-22;13!CL:0002252;3.56e-19;1!CL:0002076;8.65e-16;42!CL:0002077;8.04e-12;34!CL:0000317;1.57e-10;2!CL:1000448;1.57e-10;2!CL:0002308;1.57e-10;2!CL:0002140;1.57e-10;2!CL:0000362;5.10e-09;9!CL:0002621;2.12e-07;3!CL:0000307;2.88e-07;3 | |ontology_enrichment_celltype_v019=CL:0002166;8.69e-55;3!CL:0002159;2.24e-32;14!CL:0002368;2.28e-22;13!CL:0002252;3.56e-19;1!CL:0002076;8.65e-16;42!CL:0002077;8.04e-12;34!CL:0000317;1.57e-10;2!CL:1000448;1.57e-10;2!CL:0002308;1.57e-10;2!CL:0002140;1.57e-10;2!CL:0000362;5.10e-09;9!CL:0002621;2.12e-07;3!CL:0000307;2.88e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002166,7.24e-55,3;CL:0002159,2.31e-32,14;CL:0002368,2.34e-22,13;CL:0002252,3.25e-19,1;CL:0002076,2.83e-15,42;CL:0002077,1.94e-13,34;CL:0000223,4.97e-11,58;CL:0000317,1.57e-10,2;CL:1000448,1.57e-10,2;CL:0002308,1.57e-10,2;CL:0002140,1.57e-10,2;CL:0000362,5.42e-09,9;CL:0002321,5.72e-08,250;CL:0000066,6.20e-08,253;CL:0002621,2.05e-07,3;CL:0000068,3.35e-07,3;CL:0000069,3.35e-07,3;CL:0000307,3.35e-07,3;CL:0000377,3.35e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;3.48e-08;58!CL:0000377;2.88e-07;3 | |ontology_enrichment_development_v019=CL:0000223;3.48e-08;58!CL:0000377;2.88e-07;3 | ||
|ontology_enrichment_disease=DOID:4960!1.54e-07!1;DOID:0070004!1.54e-07!1 | |ontology_enrichment_disease=DOID:4960!1.54e-07!1;DOID:0070004!1.54e-07!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001708;2.52e-41;4!UBERON:0008895;2.52e-41;4!UBERON:0011159;3.10e-33;5!UBERON:0011137;1.60e-15;11!UBERON:0010323;1.60e-15;11!UBERON:0000075;7.09e-11;16!UBERON:0002419;1.57e-10;2!UBERON:0007771;1.57e-10;2!UBERON:0003297;1.57e-10;2!UBERON:0001821;1.57e-10;2!UBERON:0003487;1.57e-10;2!UBERON:0001820;1.57e-10;2!UBERON:0001949;2.12e-07;3!UBERON:0001043;2.88e-07;3!UBERON:0004765;6.56e-07;26 | |ontology_enrichment_uberon_v019=UBERON:0001708;2.52e-41;4!UBERON:0008895;2.52e-41;4!UBERON:0011159;3.10e-33;5!UBERON:0011137;1.60e-15;11!UBERON:0010323;1.60e-15;11!UBERON:0000075;7.09e-11;16!UBERON:0002419;1.57e-10;2!UBERON:0007771;1.57e-10;2!UBERON:0003297;1.57e-10;2!UBERON:0001821;1.57e-10;2!UBERON:0003487;1.57e-10;2!UBERON:0001820;1.57e-10;2!UBERON:0001949;2.12e-07;3!UBERON:0001043;2.88e-07;3!UBERON:0004765;6.56e-07;26 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,2.20e-41,4;UBERON:0008895,2.20e-41,4;UBERON:0011159,2.78e-33,5;UBERON:0010188,7.10e-28,6;UBERON:0002539,7.10e-28,6;UBERON:0008816,7.10e-28,6;UBERON:0010323,1.52e-15,11;UBERON:0011137,2.34e-12,14;UBERON:0000075,6.86e-11,16;UBERON:0002419,1.57e-10,2;UBERON:0007771,1.57e-10,2;UBERON:0003297,1.57e-10,2;UBERON:0001821,1.57e-10,2;UBERON:0003487,1.57e-10,2;UBERON:0001820,1.57e-10,2;UBERON:0005089,1.57e-10,2;UBERON:0005088,1.57e-10,2;UBERON:0008814,9.53e-10,18;UBERON:0001949,2.05e-07,3;UBERON:0001043,2.79e-07,3;UBERON:0009143,2.79e-07,3 | |||
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|short_description=p@chr16:57954525..57954533,- | |short_description=p@chr16:57954525..57954533,- | ||
}} | }} |
Latest revision as of 05:09, 17 September 2015
Short description: | p@chr16:57954525..57954533, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:57954525..57954533, - |
Coexpression cluster: | C406_Mallassezderived_Mesothelial_mesenchymal_chorionic_Gingival_Placental_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 7.24e-55 | 3 |
general ecto-epithelial cell | 2.31e-32 | 14 |
respiratory epithelial cell | 2.34e-22 | 13 |
epithelial cell of esophagus | 3.25e-19 | 1 |
endo-epithelial cell | 2.83e-15 | 42 |
ecto-epithelial cell | 1.94e-13 | 34 |
endodermal cell | 4.97e-11 | 58 |
sebum secreting cell | 1.57e-10 | 2 |
epithelial cell of sweat gland | 1.57e-10 | 2 |
epithelial cell of skin gland | 1.57e-10 | 2 |
acinar cell of sebaceous gland | 1.57e-10 | 2 |
epidermal cell | 5.42e-09 | 9 |
embryonic cell | 5.72e-08 | 250 |
epithelial cell | 6.20e-08 | 253 |
gingival epithelial cell | 2.05e-07 | 3 |
duct epithelial cell | 3.35e-07 | 3 |
branched duct epithelial cell | 3.35e-07 | 3 |
tracheal epithelial cell | 3.35e-07 | 3 |
tracheoblast | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 2.20e-41 | 4 |
splanchnocranium | 2.20e-41 | 4 |
primary subdivision of cranial skeletal system | 2.78e-33 | 5 |
protuberance | 7.10e-28 | 6 |
pharyngeal arch | 7.10e-28 | 6 |
embryonic head | 7.10e-28 | 6 |
cranial skeletal system | 1.52e-15 | 11 |
axial skeletal system | 2.34e-12 | 14 |
subdivision of skeletal system | 6.86e-11 | 16 |
skin gland | 1.57e-10 | 2 |
epidermis gland | 1.57e-10 | 2 |
gland of integumental system | 1.57e-10 | 2 |
sebaceous gland | 1.57e-10 | 2 |
skin sebaceous gland | 1.57e-10 | 2 |
sweat gland | 1.57e-10 | 2 |
sweat gland placode | 1.57e-10 | 2 |
sebaceous gland placode | 1.57e-10 | 2 |
pharyngeal arch system | 9.53e-10 | 18 |
gingival epithelium | 2.05e-07 | 3 |
esophagus | 2.79e-07 | 3 |
esophageal region | 2.79e-07 | 3 |