FFCP PHASE1:Hg19::chr17:71161200..71161204,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6752 | |EntrezGene=6752 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11331 | |HGNC=11331 | ||
|TSSclassifier=strong | |||
|UniProt=P30874 | |UniProt=P30874 | ||
|association_with_transcript=40bp_to_ENST00000357585,NM_001050,uc002jje.2_5end | |association_with_transcript=40bp_to_ENST00000357585,NM_001050,uc002jje.2_5end | ||
|cluster_id=chr17:71161200..71161204,+ | |||
|coexpression_cluster_id=C3673 | |coexpression_cluster_id=C3673 | ||
|description=CAGE_peak_3_at_SSTR2_5end | |description=CAGE_peak_3_at_SSTR2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000047!5.41e-10!8;CL:0002319!7.58e-08!25 | |ontology_enrichment_celltype=CL:0000047!5.41e-10!8;CL:0002319!7.58e-08!25 | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.07e-17;2!CL:0000333;5.35e-08;5 | |ontology_enrichment_celltype_v019=CL:0000047;1.07e-17;2!CL:0000333;5.35e-08;5 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.89e-12;3 | |ontology_enrichment_development_v019=UBERON:0006215;2.89e-12;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;7.17e-07;6 | |ontology_enrichment_disease_v019=DOID:169;7.17e-07;6 | ||
|ontology_enrichment_disease_v019_2=DOID:169,7.17e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001017!7.86e-45!82;UBERON:0005743!2.58e-42!86;UBERON:0000073!2.74e-42!94;UBERON:0001016!2.74e-42!94;UBERON:0000955!9.58e-35!69;UBERON:0006238!9.58e-35!69;UBERON:0001893!1.44e-32!34;UBERON:0001049!2.31e-30!57;UBERON:0005068!2.31e-30!57;UBERON:0006241!2.31e-30!57;UBERON:0007135!2.31e-30!57;UBERON:0002791!2.45e-30!33;UBERON:0002020!2.20e-29!34;UBERON:0003528!2.20e-29!34;UBERON:0002616!4.47e-29!59;UBERON:0001869!1.71e-28!32;UBERON:0002619!1.63e-26!22;UBERON:0002780!3.53e-26!41;UBERON:0001890!3.53e-26!41;UBERON:0006240!3.53e-26!41;UBERON:0003080!1.95e-25!42;UBERON:0000956!5.29e-23!25;UBERON:0000203!5.29e-23!25;UBERON:0003075!5.36e-23!86;UBERON:0007284!5.36e-23!86;UBERON:0001950!7.23e-22!20;UBERON:0002346!1.24e-21!90;UBERON:0004121!2.13e-20!169;UBERON:0000924!1.08e-19!173;UBERON:0006601!1.08e-19!173;UBERON:0003056!1.12e-19!61;UBERON:0000033!9.91e-19!123;UBERON:0000153!1.81e-17!129;UBERON:0007811!1.81e-17!129;UBERON:0000349!1.03e-15!5;UBERON:0001871!2.01e-13!7;UBERON:0007023!1.01e-12!115;UBERON:0002420!1.63e-11!9;UBERON:0007245!1.63e-11!9;UBERON:0010009!1.63e-11!9;UBERON:0010011!1.63e-11!9;UBERON:0000454!1.63e-11!9;UBERON:0000200!5.77e-08!6;UBERON:0002308!8.12e-08!9;UBERON:0000125!8.12e-08!9;UBERON:0001876!2.10e-07!2;UBERON:0000369!3.38e-07!4;UBERON:0002435!3.38e-07!4;UBERON:0000204!3.38e-07!4;UBERON:0010082!3.38e-07!4;UBERON:0001954!4.52e-07!2;UBERON:0003022!4.52e-07!2;UBERON:0002421!4.52e-07!2;UBERON:0002600!4.52e-07!2;UBERON:0009663!7.92e-07!7 | |ontology_enrichment_uberon=UBERON:0001017!7.86e-45!82;UBERON:0005743!2.58e-42!86;UBERON:0000073!2.74e-42!94;UBERON:0001016!2.74e-42!94;UBERON:0000955!9.58e-35!69;UBERON:0006238!9.58e-35!69;UBERON:0001893!1.44e-32!34;UBERON:0001049!2.31e-30!57;UBERON:0005068!2.31e-30!57;UBERON:0006241!2.31e-30!57;UBERON:0007135!2.31e-30!57;UBERON:0002791!2.45e-30!33;UBERON:0002020!2.20e-29!34;UBERON:0003528!2.20e-29!34;UBERON:0002616!4.47e-29!59;UBERON:0001869!1.71e-28!32;UBERON:0002619!1.63e-26!22;UBERON:0002780!3.53e-26!41;UBERON:0001890!3.53e-26!41;UBERON:0006240!3.53e-26!41;UBERON:0003080!1.95e-25!42;UBERON:0000956!5.29e-23!25;UBERON:0000203!5.29e-23!25;UBERON:0003075!5.36e-23!86;UBERON:0007284!5.36e-23!86;UBERON:0001950!7.23e-22!20;UBERON:0002346!1.24e-21!90;UBERON:0004121!2.13e-20!169;UBERON:0000924!1.08e-19!173;UBERON:0006601!1.08e-19!173;UBERON:0003056!1.12e-19!61;UBERON:0000033!9.91e-19!123;UBERON:0000153!1.81e-17!129;UBERON:0007811!1.81e-17!129;UBERON:0000349!1.03e-15!5;UBERON:0001871!2.01e-13!7;UBERON:0007023!1.01e-12!115;UBERON:0002420!1.63e-11!9;UBERON:0007245!1.63e-11!9;UBERON:0010009!1.63e-11!9;UBERON:0010011!1.63e-11!9;UBERON:0000454!1.63e-11!9;UBERON:0000200!5.77e-08!6;UBERON:0002308!8.12e-08!9;UBERON:0000125!8.12e-08!9;UBERON:0001876!2.10e-07!2;UBERON:0000369!3.38e-07!4;UBERON:0002435!3.38e-07!4;UBERON:0000204!3.38e-07!4;UBERON:0010082!3.38e-07!4;UBERON:0001954!4.52e-07!2;UBERON:0003022!4.52e-07!2;UBERON:0002421!4.52e-07!2;UBERON:0002600!4.52e-07!2;UBERON:0009663!7.92e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002114;2.19e-12;2!UBERON:0000013;5.35e-08;5!UBERON:0002410;5.35e-08;5!UBERON:0002108;5.92e-08;4!UBERON:0001872;7.01e-08;5!UBERON:0000922;8.78e-08;49!UBERON:0001950;2.82e-07;20!UBERON:0001016;4.80e-07;83!UBERON:0002037;8.97e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0002114;2.19e-12;2!UBERON:0000013;5.35e-08;5!UBERON:0002410;5.35e-08;5!UBERON:0002108;5.92e-08;4!UBERON:0001872;7.01e-08;5!UBERON:0000922;8.78e-08;49!UBERON:0001950;2.82e-07;20!UBERON:0001016;4.80e-07;83!UBERON:0002037;8.97e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002114,2.31e-12,2;UBERON:0001016,2.02e-09,89;UBERON:0000013,5.35e-08,5;UBERON:0002410,5.35e-08,5;UBERON:0002108,6.13e-08,4;UBERON:0001872,7.49e-08,5;UBERON:0001950,2.86e-07,20;UBERON:0001017,6.85e-07,81;UBERON:0002037,8.48e-07,6;UBERON:0006215,8.48e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0.773288812777695,0.670065061337395,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0.111308705022906,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,1.52581736317083,0.110579259931225,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741383633679017,0.208843899010911,0.067401132980677,0,0,0,0,0,0,0,2.44858209304392,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0.407712618220842,0.418411385249333,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.364497339948148,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0.243585196761792,0,0,0.5013797880454,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,5.62735233736067,0.539124056983409,0,0,0,0,0,0,0,0,0,0,0,0.578063025868136,0,0,0,0.756215088665154,0.276629009856872,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0,0.0634158101939068,1.09394961803644,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0.328863867814245,0,0,0,0.157115589916002,0,0,0,0,0,0.94808167039636,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0.198950775161368,0,0,0.549702583727146,0,0,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.543931921527318,2.18175345170189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0.773288812777695,0.670065061337395,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0.111308705022906,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,1.52581736317083,0.110579259931225,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741383633679017,0.208843899010911,0.067401132980677,0,0,0,0,0,0,0,2.44858209304392,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0.407712618220842,0.418411385249333,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.364497339948148,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0.243585196761792,0,0,0.5013797880454,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,5.62735233736067,0.539124056983409,0,0,0,0,0,0,0,0,0,0,0,0.578063025868136,0,0,0,0.756215088665154,0.276629009856872,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0,0.0634158101939068,1.09394961803644,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0.328863867814245,0,0,0,0.157115589916002,0,0,0,0,0,0.94808167039636,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0.198950775161368,0,0,0.549702583727146,0,0,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.543931921527318,2.18175345170189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@SSTR2 | |short_description=p3@SSTR2 | ||
}} | }} |
Latest revision as of 05:03, 17 September 2015
Short description: | p3@SSTR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SSTR2_5end |
Coexpression cluster: | C3673_neuroblastoma_brain_small_cerebellum_occipital_temporal_duodenum |
Association with transcript: | 40bp_to_ENST00000357585, NM_001050, uc002jje.2_5end |
EntrezGene: | SSTR2 |
HGNC: | 11331 |
UniProt: | P30874 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duodenum | 2.31e-12 | 2 |
nervous system | 2.02e-09 | 89 |
sympathetic nervous system | 5.35e-08 | 5 |
autonomic nervous system | 5.35e-08 | 5 |
small intestine | 6.13e-08 | 4 |
parietal lobe | 7.49e-08 | 5 |
neocortex | 2.86e-07 | 20 |
central nervous system | 6.85e-07 | 81 |
cerebellum | 8.48e-07 | 6 |
rhombic lip | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 7.17e-07 | 6 |