FFCP PHASE1:Hg19::chr17:71161200..71161204,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6752 | |EntrezGene=6752 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11331 | |HGNC=11331 | ||
|TSSclassifier=strong | |||
|UniProt=P30874 | |UniProt=P30874 | ||
|association_with_transcript=40bp_to_ENST00000357585,NM_001050,uc002jje.2_5end | |association_with_transcript=40bp_to_ENST00000357585,NM_001050,uc002jje.2_5end | ||
|cluster_id=chr17:71161200..71161204,+ | |||
|coexpression_cluster_id=C3673 | |coexpression_cluster_id=C3673 | ||
|description=CAGE_peak_3_at_SSTR2_5end | |description=CAGE_peak_3_at_SSTR2_5end | ||
|id=chr17:71161200..71161204,+ | |id=chr17:71161200..71161204,+ | ||
|ontology_enrichment_celltype=CL:0000047!5.41e-10!8;CL:0002319!7.58e-08!25 | |ontology_enrichment_celltype=CL:0000047!5.41e-10!8;CL:0002319!7.58e-08!25 | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.07e-17;2!CL:0000333;5.35e-08;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.89e-12;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;7.17e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,7.17e-07,6 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002114;2.19e-12;2!UBERON:0000013;5.35e-08;5!UBERON:0002410;5.35e-08;5!UBERON:0002108;5.92e-08;4!UBERON:0001872;7.01e-08;5!UBERON:0000922;8.78e-08;49!UBERON:0001950;2.82e-07;20!UBERON:0001016;4.80e-07;83!UBERON:0002037;8.97e-07;6 | |||
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| ||
|short_description=p3@SSTR2 | |short_description=p3@SSTR2 | ||
}} | }} |
Latest revision as of 05:03, 17 September 2015
Short description: | p3@SSTR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SSTR2_5end |
Coexpression cluster: | C3673_neuroblastoma_brain_small_cerebellum_occipital_temporal_duodenum |
Association with transcript: | 40bp_to_ENST00000357585, NM_001050, uc002jje.2_5end |
EntrezGene: | SSTR2 |
HGNC: | 11331 |
UniProt: | P30874 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duodenum | 2.31e-12 | 2 |
nervous system | 2.02e-09 | 89 |
sympathetic nervous system | 5.35e-08 | 5 |
autonomic nervous system | 5.35e-08 | 5 |
small intestine | 6.13e-08 | 4 |
parietal lobe | 7.49e-08 | 5 |
neocortex | 2.86e-07 | 20 |
central nervous system | 6.85e-07 | 81 |
cerebellum | 8.48e-07 | 6 |
rhombic lip | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 7.17e-07 | 6 |