FFCP PHASE1:Hg19::chr1:153346989..153347005,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6283 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=10489 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=62bp_to_AB464695,HQ257882_5end | |||
|cluster_id=chr1:153346989..153347005,- | |||
|coexpression_cluster_id=C107 | |||
|description=CAGE_peak_2_at_S100A12_5end | |||
|id=chr1:153346989..153347005,- | |||
|ontology_enrichment_celltype=CL:0002057!4.43e-96!42;CL:0000860!5.42e-89!45;CL:0000766!2.38e-63!76;CL:0002194!1.52e-59!63;CL:0000576!1.52e-59!63;CL:0000040!1.52e-59!63;CL:0000559!1.52e-59!63;CL:0002009!1.97e-57!65;CL:0000839!1.13e-52!70;CL:0000557!8.44e-52!71;CL:0000763!9.30e-42!112;CL:0000049!9.30e-42!112;CL:0000738!7.24e-35!140;CL:0002087!1.64e-32!119;CL:0000037!9.80e-28!172;CL:0000566!9.80e-28!172;CL:0002031!3.26e-27!124;CL:0002032!2.81e-26!165;CL:0000837!2.81e-26!165;CL:0000988!1.39e-25!182;CL:0000775!7.30e-11!3;CL:0000094!9.95e-10!8;CL:0002393!4.34e-08!9;CL:0002397!4.34e-08!9;CL:0000134!1.44e-07!358;CL:0002320!3.18e-07!365;CL:0000081!5.73e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.57e-136;33!CL:0002057;1.57e-136;33!CL:0000473;4.01e-94;39!CL:0000234;4.01e-94;39!CL:0000576;8.01e-70;48!CL:0000766;5.29e-43;69!CL:0000763;1.85e-19;100!CL:0002087;4.01e-17;104!CL:0000775;1.93e-16;3!CL:0000738;1.30e-13;136!CL:0000988;2.19e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.38e-132,42;CL:0002057,2.38e-132,42;CL:0000473,5.53e-115,48;CL:0000234,5.53e-115,48;CL:0002194,1.16e-90,59;CL:0000576,1.16e-90,59;CL:0000040,1.16e-90,59;CL:0000559,1.16e-90,59;CL:0000766,2.99e-88,72;CL:0002009,1.60e-87,61;CL:0000839,1.71e-80,66;CL:0000557,3.27e-79,67;CL:0000763,7.91e-57,108;CL:0000049,7.91e-57,108;CL:0002087,1.27e-46,115;CL:0000738,1.44e-46,136;CL:0002031,1.47e-41,120;CL:0000037,2.05e-36,168;CL:0002032,6.02e-36,161;CL:0000837,6.02e-36,161;CL:0000988,3.25e-34,177;CL:0000775,1.57e-16,3;CL:0000134,1.54e-13,354;CL:0002320,3.92e-13,361;CL:0000219,1.05e-11,386;CL:0000048,5.88e-10,427;CL:0000723,1.03e-09,433;CL:0000034,2.10e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.97e-93;42!CL:0000049;3.26e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.02e-51!102;UBERON:0003061!3.02e-51!102;UBERON:0002193!1.10e-45!112;UBERON:0002371!6.41e-45!80;UBERON:0001474!3.99e-41!86;UBERON:0002405!1.11e-33!115;UBERON:0004765!1.33e-33!101;UBERON:0001434!1.33e-33!101;UBERON:0003081!2.60e-18!216;UBERON:0002204!1.14e-17!167;UBERON:0002384!9.32e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.59e-69,76;UBERON:0001474,1.10e-63,82;UBERON:0002390,2.93e-59,98;UBERON:0003061,2.93e-59,98;UBERON:0004765,1.70e-57,90;UBERON:0002405,1.91e-55,93;UBERON:0002193,3.43e-53,108;UBERON:0001434,3.92e-51,100;UBERON:0002204,5.13e-28,167;UBERON:0003081,3.66e-25,203;UBERON:0000926,8.54e-15,315;UBERON:0004120,8.54e-15,315;UBERON:0006603,8.54e-15,315;UBERON:0002384,1.40e-12,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,1.10799081706375,3.00816671205213,0.434021741431704,0,0,0,6.10672602874172,2.64513160582167,1.69808842831471,6.97287110717054,1.23350366406548,1.85823822537062,5.46615545412086,3.07392847834921,2.36482229888585,2.06847408441971,1.93645405075148,0,5.27078550719293,3.0019676506363,1.12361742222542,8.57034898638527,1.28371610830437,1.91801137739712,4.28806690242731,3.59034583718937,3.40979800426155,7.54544020434318,2.8369261234557,1.86846674698672,9.2962006144995,4.17186334736161,2.38907729175628,7.87019353423379,2.57794345191295,3.16462387440884,0,0.212604299965044,0.209658645508376,2.13424399178341,3.00353785683013,1.28580469357664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,2.99602809578873,8.97484377612075,5.38740167466846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23571301227925,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,1.29694662238543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0.535701835878287,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0,0,0.124149428591716,0,0,0,0.435433495793923,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,1.33151354837103,0,0 | |||
|short_description=p2@S100A12 | |||
}} |
Latest revision as of 05:02, 17 September 2015
Short description: | p2@S100A12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_S100A12_5end |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | 62bp_to_AB464695, HQ257882_5end |
EntrezGene: | S100A12 |
HGNC: | 10489 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.38e-132 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.38e-132 | 42 |
defensive cell | 5.53e-115 | 48 |
phagocyte | 5.53e-115 | 48 |
monopoietic cell | 1.16e-90 | 59 |
monocyte | 1.16e-90 | 59 |
monoblast | 1.16e-90 | 59 |
promonocyte | 1.16e-90 | 59 |
myeloid leukocyte | 2.99e-88 | 72 |
macrophage dendritic cell progenitor | 1.60e-87 | 61 |
myeloid lineage restricted progenitor cell | 1.71e-80 | 66 |
granulocyte monocyte progenitor cell | 3.27e-79 | 67 |
myeloid cell | 7.91e-57 | 108 |
common myeloid progenitor | 7.91e-57 | 108 |
nongranular leukocyte | 1.27e-46 | 115 |
leukocyte | 1.44e-46 | 136 |
hematopoietic lineage restricted progenitor cell | 1.47e-41 | 120 |
hematopoietic stem cell | 2.05e-36 | 168 |
hematopoietic oligopotent progenitor cell | 6.02e-36 | 161 |
hematopoietic multipotent progenitor cell | 6.02e-36 | 161 |
hematopoietic cell | 3.25e-34 | 177 |
neutrophil | 1.57e-16 | 3 |
mesenchymal cell | 1.54e-13 | 354 |
connective tissue cell | 3.92e-13 | 361 |
motile cell | 1.05e-11 | 386 |
multi fate stem cell | 5.88e-10 | 427 |
somatic stem cell | 1.03e-09 | 433 |
stem cell | 2.10e-09 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.59e-69 | 76 |
bone element | 1.10e-63 | 82 |
hematopoietic system | 2.93e-59 | 98 |
blood island | 2.93e-59 | 98 |
skeletal element | 1.70e-57 | 90 |
immune system | 1.91e-55 | 93 |
hemolymphoid system | 3.43e-53 | 108 |
skeletal system | 3.92e-51 | 100 |
musculoskeletal system | 5.13e-28 | 167 |
lateral plate mesoderm | 3.66e-25 | 203 |
mesoderm | 8.54e-15 | 315 |
mesoderm-derived structure | 8.54e-15 | 315 |
presumptive mesoderm | 8.54e-15 | 315 |
connective tissue | 1.40e-12 | 371 |