FFCP PHASE1:Hg19::chr1:26496382..26496457,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51042 | |EntrezGene=51042 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30943 | |HGNC=30943 | ||
|TSSclassifier=strong | |||
|UniProt=A9J4F5,O00488 | |UniProt=A9J4F5,O00488 | ||
|association_with_transcript=0bp_to_ENST00000270812,NM_015871,uc001bll.3_5end | |association_with_transcript=0bp_to_ENST00000270812,NM_015871,uc001bll.3_5end | ||
|cluster_id=chr1:26496382..26496457,+ | |||
|coexpression_cluster_id=C2487 | |||
|description=CAGE_peak_1_at_ZNF593_5end | |description=CAGE_peak_1_at_ZNF593_5end | ||
|id=chr1:26496382..26496457,+ | |id=chr1:26496382..26496457,+ | ||
|ontology_enrichment_celltype=CL:0000066!7.34e-24!254;CL:0000012!3.62e-19!682;CL:0000548!5.90e-19!679;CL:0000004!5.90e-19!679;CL:0000255!5.90e-19!679;CL:0000220!1.60e-16!246;CL:0002321!3.13e-16!248;CL:0000003!8.48e-10!722;CL:0000144!8.59e-09!625;CL:0000183!1.58e-07!59;CL:0000063!4.92e-07!578;CL:0000222!7.37e-07!119 | |ontology_enrichment_celltype=CL:0000066!7.34e-24!254;CL:0000012!3.62e-19!682;CL:0000548!5.90e-19!679;CL:0000004!5.90e-19!679;CL:0000255!5.90e-19!679;CL:0000220!1.60e-16!246;CL:0002321!3.13e-16!248;CL:0000003!8.48e-10!722;CL:0000144!8.59e-09!625;CL:0000183!1.58e-07!59;CL:0000063!4.92e-07!578;CL:0000222!7.37e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:1000449;7.89e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.27e-24,253;CL:0002321,1.71e-16,250;CL:0000222,4.72e-07,121;CL:1000449,8.29e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!3.21e-20!239;DOID:162!1.65e-19!235;DOID:0050687!5.10e-13!143;DOID:305!2.10e-09!106;DOID:0050686!2.24e-09!137;DOID:2531!7.57e-07!51;DOID:0060083!7.57e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,3.21e-20,239;DOID:162,1.65e-19,235;DOID:0050687,5.10e-13,143;DOID:305,2.10e-09,106;DOID:0050686,2.24e-09,137;DOID:2531,7.57e-07,51;DOID:0060083,7.57e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0003104!4.25e-13!238;UBERON:0009142!4.25e-13!238;UBERON:0002100!2.62e-11!216;UBERON:0005256!9.39e-10!143;UBERON:0000486!5.45e-09!82;UBERON:0004290!9.99e-08!70;UBERON:0000490!1.96e-07!138;UBERON:0005177!8.87e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;3.77e-07;30!UBERON:0001008;3.77e-07;30!UBERON:0002113;6.62e-07;24!UBERON:0011143;6.62e-07;24!UBERON:0006555;7.89e-07;15!UBERON:0004819;7.89e-07;15!UBERON:0001285;7.89e-07;15!UBERON:0007684;7.89e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,6.78e-13,199;UBERON:0003104,8.02e-11,160;UBERON:0009142,8.02e-11,160;UBERON:0007503,4.45e-10,78;UBERON:0005256,6.33e-09,122;UBERON:0000486,6.76e-09,83;UBERON:0000490,9.07e-09,148;UBERON:0005177,6.05e-08,101;UBERON:0002329,1.24e-07,71;UBERON:0003059,1.24e-07,71;UBERON:0007282,1.24e-07,71;UBERON:0004290,1.24e-07,71;UBERON:0009618,1.24e-07,71;UBERON:0003077,3.56e-07,72;UBERON:0007285,3.56e-07,72;UBERON:0007524,5.04e-07,73;UBERON:0004211,8.29e-07,15;UBERON:0009773,8.29e-07,15;UBERON:0001231,8.29e-07,15;UBERON:0001285,8.29e-07,15;UBERON:0007684,8.29e-07,15;UBERON:0004208,8.29e-07,15 | |||
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| ||
|short_description=p1@ZNF593 | |short_description=p1@ZNF593 | ||
}} | }} |
Latest revision as of 04:52, 17 September 2015
Short description: | p1@ZNF593 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF593_5end |
Coexpression cluster: | C2487_Alveolar_Mesenchymal_Renal_Placental_Bronchial_acute_Tracheal |
Association with transcript: | 0bp_to_ENST00000270812, NM_015871, uc001bll.3_5end |
EntrezGene: | ZNF593 |
HGNC: | 30943 |
UniProt: | A9J4F5O00488 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.27e-24 | 253 |
embryonic cell | 1.71e-16 | 250 |
mesodermal cell | 4.72e-07 | 121 |
epithelial cell of nephron | 8.29e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
trunk | 6.78e-13 | 199 |
mesenchyme | 8.02e-11 | 160 |
entire embryonic mesenchyme | 8.02e-11 | 160 |
epithelial vesicle | 4.45e-10 | 78 |
trunk mesenchyme | 6.33e-09 | 122 |
multilaminar epithelium | 6.76e-09 | 83 |
unilaminar epithelium | 9.07e-09 | 148 |
trunk region element | 6.05e-08 | 101 |
somite | 1.24e-07 | 71 |
presomitic mesoderm | 1.24e-07 | 71 |
presumptive segmental plate | 1.24e-07 | 71 |
dermomyotome | 1.24e-07 | 71 |
trunk paraxial mesoderm | 1.24e-07 | 71 |
paraxial mesoderm | 3.56e-07 | 72 |
presumptive paraxial mesoderm | 3.56e-07 | 72 |
dense mesenchyme tissue | 5.04e-07 | 73 |
nephron epithelium | 8.29e-07 | 15 |
renal tubule | 8.29e-07 | 15 |
nephron tubule | 8.29e-07 | 15 |
nephron | 8.29e-07 | 15 |
uriniferous tubule | 8.29e-07 | 15 |
nephrogenic mesenchyme | 8.29e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 3.21e-20 | 239 |
cancer | 1.65e-19 | 235 |
cell type cancer | 5.10e-13 | 143 |
carcinoma | 2.10e-09 | 106 |
organ system cancer | 2.24e-09 | 137 |
hematologic cancer | 7.57e-07 | 51 |
immune system cancer | 7.57e-07 | 51 |