FFCP PHASE1:Hg19::chr10:135044006..135044017,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:135044006..135044017,+
|short_description=p12@UTF1
|description=CAGE_peak_12_at_UTF1_5end
|association_with_transcript=213bp_to_BC166624_5end
|EntrezGene...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8433 | |EntrezGene=8433 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12634 | |HGNC=12634 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=213bp_to_BC166624_5end | |||
|cluster_id=chr10:135044006..135044017,+ | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_12_at_UTF1_5end | |||
|id=chr10:135044006..135044017,+ | |||
|ontology_enrichment_celltype=CL:0002322!3.56e-48!5;CL:0000039!1.01e-22!7;CL:0000586!1.01e-22!7;CL:0000148!3.13e-09!10;CL:0000541!3.13e-09!10;CL:0000147!9.99e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.12e-64;7!CL:0000586;1.12e-64;7!CL:0002322;4.57e-51;5!CL:0002321;1.23e-17;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.12e-64,7;CL:0000586,1.12e-64,7;CL:0002322,4.58e-51,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.57e-45;10!UBERON:0005564;1.57e-45;10 | |||
|ontology_enrichment_disease=DOID:3095!5.61e-11!22;DOID:2994!5.61e-11!22;DOID:0050619!1.33e-10!1;DOID:1357!1.33e-10!1;DOID:225!1.61e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.38e-21;22!DOID:2994;4.38e-21;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.38e-21,22;DOID:2994,4.38e-21,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.50e-43!8;UBERON:0003135!1.93e-31!11;UBERON:0000991!8.24e-22!21;UBERON:0009196!8.24e-22!21;UBERON:0009117!8.24e-22!21;UBERON:0005564!8.24e-22!21;UBERON:0004176!8.64e-21!22;UBERON:0003101!1.52e-15!22;UBERON:0000079!1.52e-15!22;UBERON:0001764!1.33e-10!1;UBERON:0001825!1.33e-10!1;UBERON:0002323!1.41e-09!46;UBERON:0003133!3.78e-09!48;UBERON:0004458!6.02e-09!49;UBERON:0002553!8.52e-08!70;UBERON:0005156!2.65e-07!59;UBERON:0000990!2.65e-07!59;UBERON:0003886!8.59e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.06e-56;8!UBERON:0003135;1.83e-41;11!UBERON:0000991;4.66e-22;21!UBERON:0003101;4.38e-21;22!UBERON:0000079;4.38e-21;22!UBERON:0000922;2.06e-20;49!UBERON:0002323;5.61e-10;45!UBERON:0003133;3.09e-08;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.06e-56,8;UBERON:0003135,1.83e-41,11;UBERON:0000991,4.66e-22,21;UBERON:0009196,4.66e-22,21;UBERON:0009117,4.66e-22,21;UBERON:0005564,4.66e-22,21;UBERON:0004176,4.38e-21,22;UBERON:0003101,4.38e-21,22;UBERON:0000079,4.38e-21,22;UBERON:0002323,2.27e-10,46;UBERON:0003133,5.88e-10,48;UBERON:0004458,9.18e-10,49;UBERON:0003886,6.69e-09,54;UBERON:0005156,3.49e-08,59;UBERON:0000990,3.49e-08,59;UBERON:0002553,6.28e-08,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07355300420312,1.19276791489337,0.929551542956147,1.14027160516907,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0,1.1218771271618,8.28373956323238,1.37842349302267,4.51273570726275,0.378893491091197,0.535928260312357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07355300420312,1.19276791489337,0.929551542956147,1.14027160516907,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0,1.1218771271618,8.28373956323238,1.37842349302267,4.51273570726275,0.378893491091197,0.535928260312357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p12@UTF1 | |||
}} | }} |
Latest revision as of 04:46, 17 September 2015
Short description: | p12@UTF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_UTF1_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | 213bp_to_BC166624_5end |
EntrezGene: | UTF1 |
HGNC: | 12634 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.12e-64 | 7 |
germ cell | 1.12e-64 | 7 |
embryonic stem cell | 4.58e-51 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 1.06e-56 | 8 |
male reproductive organ | 1.83e-41 | 11 |
gonad | 4.66e-22 | 21 |
indifferent external genitalia | 4.66e-22 | 21 |
indifferent gonad | 4.66e-22 | 21 |
gonad primordium | 4.66e-22 | 21 |
external genitalia | 4.38e-21 | 22 |
male organism | 4.38e-21 | 22 |
male reproductive system | 4.38e-21 | 22 |
body cavity | 2.27e-10 | 46 |
reproductive organ | 5.88e-10 | 48 |
body cavity or lining | 9.18e-10 | 49 |
body cavity precursor | 6.69e-09 | 54 |
reproductive structure | 3.49e-08 | 59 |
reproductive system | 3.49e-08 | 59 |
anatomical cavity | 6.28e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.38e-21 | 22 |
germ cell cancer | 4.38e-21 | 22 |