FFCP PHASE1:Hg19::chr7:150688140..150688162,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:150688140..150688162,+ to FFCP PHASE1:Hg19::chr7:150688140..150688162,+: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4846 | |EntrezGene=4846 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7876 | |HGNC=7876 | ||
|TSSclassifier=strong | |||
|UniProt=E9PFF3,P29474 | |UniProt=E9PFF3,P29474 | ||
|association_with_transcript=0bp_to_ENST00000484576,NM_000603,uc003wif.2,uc011kuy.1_5end | |||
|cluster_id=chr7:150688140..150688162,+ | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_7_at_NOS3_5end | |||
|id=chr7:150688140..150688162,+ | |||
|ontology_enrichment_celltype=CL:0000239!2.97e-08!3;CL:1000615!2.97e-08!3;CL:0002306!2.97e-08!3;CL:1000507!2.25e-07!12;CL:1000494!2.25e-07!12;CL:0000313!6.08e-07!1;CL:0002681!8.25e-07!13;CL:0002584!8.25e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000313;2.97e-19;1!CL:0000159;2.60e-10;2!CL:0002178;2.40e-07;3!CL:0000322;3.16e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,3.25e-19,1;CL:0000159,2.72e-10,2;CL:0002178,2.47e-07,3;CL:0000322,2.97e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;8.95e-20;1 | |||
|ontology_enrichment_disease=DOID:299!1.07e-12!25;DOID:3493!1.06e-11!2;DOID:305!5.18e-07!106;DOID:2152!6.08e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:2152;2.97e-19;1!DOID:299;7.47e-12;25!DOID:4929;2.17e-10;2!DOID:3493;2.17e-10;2!DOID:3910;3.27e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,3.25e-19,1;DOID:299,7.80e-12,25;DOID:4929,2.07e-10,2;DOID:3493,2.27e-10,2;DOID:3910,2.99e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0006853!2.97e-08!3;UBERON:0007685!2.97e-08!3;UBERON:0004134!2.97e-08!3;UBERON:0009773!2.25e-07!12;UBERON:0001231!2.25e-07!12;UBERON:0004810!2.25e-07!12;UBERON:0000058!5.06e-07!26;UBERON:0004913!5.13e-07!1;UBERON:0003703!5.13e-07!1;UBERON:0001174!5.13e-07!1;UBERON:0004914!5.13e-07!1;UBERON:0004911!6.08e-07!1;UBERON:0001225!8.25e-07!13;UBERON:0008987!8.25e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;2.06e-19;1!UBERON:0003703;2.06e-19;1!UBERON:0001174;2.06e-19;1!UBERON:0004914;2.06e-19;1!UBERON:0004911;2.97e-19;1!UBERON:0004909;2.60e-10;2!UBERON:0004903;3.27e-10;2!UBERON:0002173;3.27e-10;2!UBERON:0002186;3.27e-10;2!UBERON:0000058;3.97e-08;10!UBERON:0002114;2.40e-07;2!UBERON:0004821;3.16e-07;3!UBERON:0007499;3.16e-07;3!UBERON:0003215;3.16e-07;3!UBERON:0010368;3.16e-07;3!UBERON:0009911;3.16e-07;3!UBERON:0002299;3.16e-07;3!UBERON:0006524;3.16e-07;3!UBERON:0008874;3.16e-07;3!UBERON:0002169;3.16e-07;3!UBERON:0004894;3.16e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,1.88e-19,1;UBERON:0003703,1.88e-19,1;UBERON:0001174,1.88e-19,1;UBERON:0004914,1.88e-19,1;UBERON:0004911,3.25e-19,1;UBERON:0004909,2.72e-10,2;UBERON:0004903,2.99e-10,2;UBERON:0002173,2.99e-10,2;UBERON:0002186,2.99e-10,2;UBERON:0002114,2.32e-07,2;UBERON:0004821,2.97e-07,3;UBERON:0003215,2.97e-07,3;UBERON:0010368,2.97e-07,3;UBERON:0009911,2.97e-07,3;UBERON:0002299,2.97e-07,3;UBERON:0006524,2.97e-07,3;UBERON:0008874,2.97e-07,3;UBERON:0002169,2.97e-07,3;UBERON:0004894,2.97e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35359883872224,0.15403067420883,0,0,0,0,0,0,0,0,0,0.509752546090077,0.831076008928724,0,0,0,0,0,0,9.47977307159045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.5670858706869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0.7812832832557,0,0,0.341380344856499,1.77977555204936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78248697670294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,1.13843818411917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,3.54854606920909,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0.227662191351298,31.7554485182247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,2.57267493134922,3.14080747568778,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.5297215379687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.459474497674225,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35359883872224,0.15403067420883,0,0,0,0,0,0,0,0,0,0.509752546090077,0.831076008928724,0,0,0,0,0,0,9.47977307159045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.5670858706869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0.7812832832557,0,0,0.341380344856499,1.77977555204936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78248697670294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,1.13843818411917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,3.54854606920909,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0.227662191351298,31.7554485182247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,2.57267493134922,3.14080747568778,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.5297215379687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.459474497674225,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p7@NOS3 | |||
}} | }} |
Latest revision as of 04:40, 17 September 2015
Short description: | p7@NOS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_NOS3_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_ENST00000484576, NM_000603, uc003wif.2, uc011kuy.1_5end |
EntrezGene: | NOS3 |
HGNC: | 7876 |
UniProt: | E9PFF3P29474 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 3.25e-19 | 1 |
seromucus secreting cell | 2.72e-10 | 2 |
epithelial cell of stomach | 2.47e-07 | 3 |
pneumocyte | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 1.88e-19 | 1 |
extrahepatic bile duct | 1.88e-19 | 1 |
common bile duct | 1.88e-19 | 1 |
duodenal papilla | 1.88e-19 | 1 |
epithelium of female gonad | 3.25e-19 | 1 |
epithelium of gonad | 2.72e-10 | 2 |
bronchoalveolar duct junction | 2.99e-10 | 2 |
alveolar duct | 2.99e-10 | 2 |
bronchiole | 2.99e-10 | 2 |
duodenum | 2.32e-07 | 2 |
pulmonary alveolus epithelium | 2.97e-07 | 3 |
alveolus | 2.97e-07 | 3 |
pulmonary lobule | 2.97e-07 | 3 |
lobule | 2.97e-07 | 3 |
alveolus of lung | 2.97e-07 | 3 |
alveolar system | 2.97e-07 | 3 |
pulmonary acinus | 2.97e-07 | 3 |
alveolar sac | 2.97e-07 | 3 |
alveolar wall | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 3.25e-19 | 1 |
adenocarcinoma | 7.80e-12 | 25 |
tubular adenocarcinoma | 2.07e-10 | 2 |
signet ring cell adenocarcinoma | 2.27e-10 | 2 |
lung adenocarcinoma | 2.99e-10 | 2 |