FFCP PHASE1:Hg19::chr2:1418195..1418210,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7173 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12015 | |||
|TSSclassifier=strong | |||
|UniProt=P07202 | |||
|association_with_transcript=14bp_to_AF439430,CU687644_5end | |||
|cluster_id=chr2:1418195..1418210,+ | |||
|coexpression_cluster_id=C178 | |||
|description=CAGE_peak_6_at_TPO_5end | |||
|id=chr2:1418195..1418210,+ | |||
|ontology_enrichment_celltype=CL:0002322!7.49e-08!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;4.05e-40;5!UBERON:0004872;2.74e-29;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!5.00e-45!3;UBERON:0004854!5.00e-45!3;UBERON:0009034!5.00e-45!3;UBERON:0002095!5.00e-45!3;UBERON:0004782!5.00e-45!3;UBERON:0003281!5.00e-45!3;UBERON:0009664!5.00e-45!3;UBERON:0002296!5.00e-45!3;UBERON:0005602!5.00e-45!3;UBERON:0001179!5.00e-45!3;UBERON:0006293!5.00e-45!3;UBERON:0002046!2.72e-27!5;UBERON:0004117!2.72e-27!5;UBERON:0007689!2.72e-27!5;UBERON:0007123!2.72e-27!5;UBERON:0003091!2.72e-27!5;UBERON:0004177!5.35e-20!7;UBERON:0000341!1.07e-17!2;UBERON:0000945!1.22e-17!8;UBERON:0010039!1.22e-17!8;UBERON:0009722!5.10e-13!11;UBERON:0007690!5.10e-13!11;UBERON:0004457!4.07e-12!12;UBERON:0000042!4.07e-12!12;UBERON:0008814!8.10e-10!15;UBERON:0002075!2.09e-08!18;UBERON:0003887!2.44e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.71e-66;3!UBERON:0004177;1.81e-40;5!UBERON:0005057;1.81e-40;5!UBERON:0002046;4.05e-40;5!UBERON:0002075;4.07e-12;18!UBERON:0000077;1.98e-08;27!UBERON:0002405;1.98e-08;27!UBERON:0002390;3.37e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.71e-66,3;UBERON:0004854,1.71e-66,3;UBERON:0009034,1.71e-66,3;UBERON:0002095,1.71e-66,3;UBERON:0004782,1.71e-66,3;UBERON:0003281,1.71e-66,3;UBERON:0009664,1.71e-66,3;UBERON:0002296,1.71e-66,3;UBERON:0005602,1.71e-66,3;UBERON:0001179,1.71e-66,3;UBERON:0006293,1.71e-66,3;UBERON:0002046,4.05e-40,5;UBERON:0004117,4.05e-40,5;UBERON:0007689,4.05e-40,5;UBERON:0007123,4.05e-40,5;UBERON:0003091,4.05e-40,5;UBERON:0004177,2.74e-29,7;UBERON:0005057,2.74e-29,7;UBERON:0000945,8.65e-26,8;UBERON:0010039,8.65e-26,8;UBERON:0009722,6.17e-19,11;UBERON:0007690,6.17e-19,11;UBERON:0004457,1.33e-17,12;UBERON:0000042,1.33e-17,12;UBERON:0003887,1.33e-17,12;UBERON:0002075,4.07e-12,18;UBERON:0008814,5.09e-12,18;UBERON:0005409,1.03e-08,25;UBERON:0000077,6.44e-08,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3382309777839,5.73675202964837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,0,0,0,1.65482611523229,1.41482032270754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@TPO | |||
}} |
Latest revision as of 04:38, 17 September 2015
Short description: | p6@TPO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TPO_5end |
Coexpression cluster: | C178_spleen_liver_Hepatocyte_b_lymph_vein_thymus |
Association with transcript: | 14bp_to_AF439430, CU687644_5end |
EntrezGene: | TPO |
HGNC: | 12015 |
UniProt: | P07202 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spleen | 1.71e-66 | 3 |
gastrointestinal system mesentery | 1.71e-66 | 3 |
stomach region | 1.71e-66 | 3 |
mesentery | 1.71e-66 | 3 |
gastrointestinal system serosa | 1.71e-66 | 3 |
mesentery of stomach | 1.71e-66 | 3 |
gut mesentery | 1.71e-66 | 3 |
dorsal mesentery | 1.71e-66 | 3 |
dorsal mesogastrium | 1.71e-66 | 3 |
peritoneal cavity | 1.71e-66 | 3 |
spleen primordium | 1.71e-66 | 3 |
thyroid gland | 4.05e-40 | 5 |
pharyngeal pouch | 4.05e-40 | 5 |
thyroid diverticulum | 4.05e-40 | 5 |
pharyngeal pouch 2 | 4.05e-40 | 5 |
thyroid primordium | 4.05e-40 | 5 |
hemopoietic organ | 2.74e-29 | 7 |
immune organ | 2.74e-29 | 7 |
stomach | 8.65e-26 | 8 |
food storage organ | 8.65e-26 | 8 |
entire pharyngeal arch endoderm | 6.17e-19 | 11 |
early pharyngeal endoderm | 6.17e-19 | 11 |
cavity lining | 1.33e-17 | 12 |
serous membrane | 1.33e-17 | 12 |
intraembryonic coelom | 1.33e-17 | 12 |
viscus | 4.07e-12 | 18 |
pharyngeal arch system | 5.09e-12 | 18 |
gastrointestinal system | 1.03e-08 | 25 |
mixed endoderm/mesoderm-derived structure | 6.44e-08 | 29 |